RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 SMIM1B2RUZ4 78 aa13.27□□□□□ -0.29
CCS-207ENST00000531990 EPM2AB3EWF7 344 aa13.27□□□□□ -0.29
CCS-207ENST00000531990 FAM229AH3BQW9 127 aa13.27□□□□□ -0.29
CCS-207ENST00000531990 UNQ6190/PRO20217Q6UXQ8 127 aa13.27□□□□□ -0.29
CCS-207ENST00000531990 SPACA4Q8TDM5 124 aa13.27□□□□□ -0.29
CCS-207ENST00000531990 CHTOPQ9Y3Y2 248 aaKnown RBP13.27□□□□□ -0.29
CCS-207ENST00000531990 NUPR1O60356 82 aa13.26□□□□□ -0.29
CCS-207ENST00000531990 MAJINQ3KP22 176 aa13.26□□□□□ -0.29
CCS-207ENST00000531990 HSPB8Q9UJY1 196 aa13.26□□□□□ -0.29
CCS-207ENST00000531990 TRBV30A0A0K0K1B3 111 aa13.25□□□□□ -0.29
CCS-207ENST00000531990 SPINK8P0C7L1 97 aa13.25□□□□□ -0.29
CCS-207ENST00000531990 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
CCS-207ENST00000531990 C10orf25Q5T742 122 aa13.25□□□□□ -0.29
CCS-207ENST00000531990 C2orf82Q6UX34 121 aa13.25□□□□□ -0.29
CCS-207ENST00000531990 DNAH8Q96JB1 4490 aa13.25□□□□□ -0.29
CCS-207ENST00000531990 ZNF22P17026 224 aaPredicted RBP13.24□□□□□ -0.29
CCS-207ENST00000531990 RPL18AQ02543 176 aaKnown RBP13.24□□□□□ -0.29
CCS-207ENST00000531990 Q5VSD8 79 aa13.24□□□□□ -0.29
CCS-207ENST00000531990 C6orf48Q9UBA6 75 aa13.24□□□□□ -0.29
CCS-207ENST00000531990 A0A087WYN8 130 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 C11orf86A6NJI1 115 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 FABP4P15090 132 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 CXCL5P42830 114 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 PTTG1IPP53801 180 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 LINC00528Q8N1L1 170 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 COX7B2Q8TF08 81 aa13.23□□□□□ -0.29
CCS-207ENST00000531990 TMEM170BQ5T4T1 132 aa13.22□□□□□ -0.29
CCS-207ENST00000531990 F8VRH5 84 aa13.21□□□□□ -0.29
CCS-207ENST00000531990 H0Y8G0 127 aa13.21□□□□□ -0.29
CCS-207ENST00000531990 STPG4Q8N801 248 aa13.21□□□□□ -0.29
CCS-207ENST00000531990 TLX1NBP0CAT3 122 aa13.2□□□□□ -0.3
CCS-207ENST00000531990 PLAC8Q9NZF1 115 aa13.2□□□□□ -0.3
CCS-207ENST00000531990 KRTAP4-5Q9BYR2 181 aa13.19□□□□□ -0.3
CCS-207ENST00000531990 PLA2G1BP04054 148 aaKnown RBP13.18□□□□□ -0.3
CCS-207ENST00000531990 IGLV5-39A0A0G2JS06 123 aa13.17□□□□□ -0.3
CCS-207ENST00000531990 MAP1LC3CQ9BXW4 147 aa13.17□□□□□ -0.3
CCS-207ENST00000531990 ODF1Q14990 250 aa13.16□□□□□ -0.3
CCS-207ENST00000531990 NDUFC2-KCTD14E9PQ53 114 aa13.15□□□□□ -0.3
CCS-207ENST00000531990 GAGE2EQ4V326 116 aa13.15□□□□□ -0.3
CCS-207ENST00000531990 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
CCS-207ENST00000531990 COA6Q5JTJ3 125 aaKnown RBP13.15□□□□□ -0.3
CCS-207ENST00000531990 GAGE2DQ9UEU5 116 aa13.15□□□□□ -0.3
CCS-207ENST00000531990 Q6ZRP5 223 aa13.14□□□□□ -0.31
CCS-207ENST00000531990 C7orf33Q8WU49 177 aa13.13□□□□□ -0.31
CCS-207ENST00000531990 ABCA13Q86UQ4 5058 aa13.13□□□□□ -0.31
CCS-207ENST00000531990 TMEM223A0PJW6 202 aa13.12□□□□□ -0.31
CCS-207ENST00000531990 PLNP26678 52 aa13.12□□□□□ -0.31
CCS-207ENST00000531990 RPL37AP61513 92 aaKnown RBP13.11□□□□□ -0.31
CCS-207ENST00000531990 DPM2O94777 84 aa13.1□□□□□ -0.31
CCS-207ENST00000531990 SFTA2Q6UW10 78 aa13.1□□□□□ -0.31
CCS-207ENST00000531990 A0A1W2PNN7 141 aa13.08□□□□□ -0.32
CCS-207ENST00000531990 SYS1-DBNDD2H3BUS1 97 aa13.08□□□□□ -0.32
CCS-207ENST00000531990 IGKCP01834 107 aa13.07□□□□□ -0.32
CCS-207ENST00000531990 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
CCS-207ENST00000531990 PMCHL2Q9BQD1 86 aa13.07□□□□□ -0.32
CCS-207ENST00000531990 FAT1Q14517 4588 aa13.06□□□□□ -0.32
CCS-207ENST00000531990 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
CCS-207ENST00000531990 HERVK_113P61574 105 aa13.05□□□□□ -0.32
CCS-207ENST00000531990 PET117Q6UWS5 81 aa13.04□□□□□ -0.32
CCS-207ENST00000531990 C9orf129Q5T035 196 aaKnown RBP13.03□□□□□ -0.32
CCS-207ENST00000531990 FAM19A5Q7Z5A7 132 aaPredicted RBP13.03□□□□□ -0.32
CCS-207ENST00000531990 XAGE1AQ9HD64 81 aa13.03□□□□□ -0.32
CCS-207ENST00000531990 FAM168BA1KXE4 195 aa13.02□□□□□ -0.33
CCS-207ENST00000531990 PFN2P35080 140 aa13.02□□□□□ -0.33
CCS-207ENST00000531990 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.33
CCS-207ENST00000531990 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
CCS-207ENST00000531990 S100A6P06703 90 aa13.01□□□□□ -0.33
CCS-207ENST00000531990 COX17Q14061 63 aa13.01□□□□□ -0.33
CCS-207ENST00000531990 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
CCS-207ENST00000531990 LEPROTO15243 131 aa13□□□□□ -0.33
CCS-207ENST00000531990 C3orf79P0CE67 100 aa13□□□□□ -0.33
CCS-207ENST00000531990 KRTAP10-4P60372 401 aaPredicted RBP13□□□□□ -0.33
CCS-207ENST00000531990 KRTDAPP60985 99 aa13□□□□□ -0.33
CCS-207ENST00000531990 LINC01545Q5VT33 79 aa13□□□□□ -0.33
CCS-207ENST00000531990 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
CCS-207ENST00000531990 M0QXV9 152 aa12.98□□□□□ -0.33
CCS-207ENST00000531990 S100A2P29034 98 aa12.98□□□□□ -0.33
CCS-207ENST00000531990 NDUFA12Q9UI09 145 aa12.98□□□□□ -0.33
CCS-207ENST00000531990 MYMXA0A1B0GTQ4 84 aa12.97□□□□□ -0.33
CCS-207ENST00000531990 C20orf202A1L168 122 aa12.97□□□□□ -0.33
CCS-207ENST00000531990 HERV-K104P63124 156 aa12.97□□□□□ -0.33
CCS-207ENST00000531990 J3QQQ9 107 aa12.95□□□□□ -0.34
CCS-207ENST00000531990 LGALS3P17931 250 aaKnown RBP12.95□□□□□ -0.34
CCS-207ENST00000531990 LINC00158P58513 81 aa12.95□□□□□ -0.34
CCS-207ENST00000531990 PRR3P79522 188 aaKnown RBP12.95□□□□□ -0.34
CCS-207ENST00000531990 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
CCS-207ENST00000531990 HIST3H2BBQ8N257 126 aa12.95□□□□□ -0.34
CCS-207ENST00000531990 VPS13BQ7Z7G8 4022 aa12.94□□□□□ -0.34
CCS-207ENST00000531990 LINC00587B1AMM8 73 aa12.94□□□□□ -0.34
CCS-207ENST00000531990 SERTAD4-AS1Q5TG53 156 aa12.94□□□□□ -0.34
CCS-207ENST00000531990 KRTAP7-1Q8IUC3 87 aa12.94□□□□□ -0.34
CCS-207ENST00000531990 NMUP48645 174 aa12.93□□□□□ -0.34
CCS-207ENST00000531990 UBE2BP63146 152 aa12.93□□□□□ -0.34
CCS-207ENST00000531990 SND1-IT1Q9HBX3 110 aa12.93□□□□□ -0.34
CCS-207ENST00000531990 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
CCS-207ENST00000531990 E9PLD3 99 aa12.92□□□□□ -0.34
CCS-207ENST00000531990 TSPEAR-AS2P59090 65 aa12.92□□□□□ -0.34
CCS-207ENST00000531990 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
CCS-207ENST00000531990 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
CCS-207ENST00000531990 AKR1D1P51857 326 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms