RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 C10orf25Q5T742 122 aa12.45□□□□□ -0.42
SMPD1-205ENST00000531303 PCP2Q8IVA1 136 aa12.45□□□□□ -0.42
SMPD1-205ENST00000531303 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
SMPD1-205ENST00000531303 EREGO14944 169 aa12.44□□□□□ -0.42
SMPD1-205ENST00000531303 SLPIP03973 132 aa12.44□□□□□ -0.42
SMPD1-205ENST00000531303 FUSP35637 526 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMPD1-205ENST00000531303 ZNF625Q96I27 306 aaPredicted RBP12.44□□□□□ -0.42
SMPD1-205ENST00000531303 NDUFA1O15239 70 aa12.43□□□□□ -0.42
SMPD1-205ENST00000531303 C2orf48Q96LS8 159 aa12.43□□□□□ -0.42
SMPD1-205ENST00000531303 ZNF815PA8K554 130 aa12.42□□□□□ -0.42
SMPD1-205ENST00000531303 SYCNQ0VAF6 134 aa12.42□□□□□ -0.42
SMPD1-205ENST00000531303 Q6ZRU5 148 aa12.42□□□□□ -0.42
SMPD1-205ENST00000531303 C12orf57Q99622 126 aa12.42□□□□□ -0.42
SMPD1-205ENST00000531303 FRAS1Q86XX4 4008 aa12.42□□□□□ -0.42
SMPD1-205ENST00000531303 CXCL5P42830 114 aa12.41□□□□□ -0.42
SMPD1-205ENST00000531303 C14orf144Q96I85 54 aa12.41□□□□□ -0.42
SMPD1-205ENST00000531303 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
SMPD1-205ENST00000531303 CARD19Q96LW7 228 aa12.4□□□□□ -0.42
SMPD1-205ENST00000531303 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.43
SMPD1-205ENST00000531303 TP73-AS1Q9UF72 201 aa12.4□□□□□ -0.43
SMPD1-205ENST00000531303 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
SMPD1-205ENST00000531303 C6orf48Q9UBA6 75 aa12.39□□□□□ -0.43
SMPD1-205ENST00000531303 RYR3Q15413 4870 aa12.39□□□□□ -0.43
SMPD1-205ENST00000531303 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
SMPD1-205ENST00000531303 F8WDY8 70 aa12.37□□□□□ -0.43
SMPD1-205ENST00000531303 COX8AP10176 69 aa12.37□□□□□ -0.43
SMPD1-205ENST00000531303 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.36□□□□□ -0.43
SMPD1-205ENST00000531303 A0A0U1RRA0 63 aa12.36□□□□□ -0.43
SMPD1-205ENST00000531303 CNBPP62633 177 aaKnown RBP12.36□□□□□ -0.43
SMPD1-205ENST00000531303 LINC01620Q4KN68 170 aa12.36□□□□□ -0.43
SMPD1-205ENST00000531303 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
SMPD1-205ENST00000531303 PRO1933Q9H354 126 aa12.36□□□□□ -0.43
SMPD1-205ENST00000531303 PFN2P35080 140 aa12.35□□□□□ -0.43
SMPD1-205ENST00000531303 HERV-K104P63124 156 aa12.35□□□□□ -0.43
SMPD1-205ENST00000531303 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
SMPD1-205ENST00000531303 FAT2Q9NYQ8 4349 aa12.35□□□□□ -0.43
SMPD1-205ENST00000531303 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 SCGB1D4Q6XE38 83 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 IGLV5-52A0A0A0MRZ9 124 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 SLC25A34Q6PIV7 304 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 BOD1L2Q8IYS8 172 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 ERG28Q9UKR5 140 aa12.34□□□□□ -0.43
SMPD1-205ENST00000531303 SMIM13P0DJ93 91 aa12.32□□□□□ -0.44
SMPD1-205ENST00000531303 LINC00158P58513 81 aa12.32□□□□□ -0.44
SMPD1-205ENST00000531303 RNF151Q2KHN1 245 aa12.3□□□□□ -0.44
SMPD1-205ENST00000531303 C9orf163Q8N9P6 203 aa12.3□□□□□ -0.44
SMPD1-205ENST00000531303 DNAH11Q96DT5 4516 aa12.3□□□□□ -0.44
SMPD1-205ENST00000531303 DLEU1O43261 78 aa12.28□□□□□ -0.44
SMPD1-205ENST00000531303 RPL18AQ02543 176 aaKnown RBP12.28□□□□□ -0.44
SMPD1-205ENST00000531303 CIRBPQ14011 172 aaKnown RBP12.28□□□□□ -0.44
SMPD1-205ENST00000531303 DAND5Q8N907 189 aa12.28□□□□□ -0.44
SMPD1-205ENST00000531303 GAGE2BQ13066 116 aa12.27□□□□□ -0.44
SMPD1-205ENST00000531303 GAGE2EQ4V326 116 aa12.27□□□□□ -0.44
SMPD1-205ENST00000531303 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.44
SMPD1-205ENST00000531303 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.44
SMPD1-205ENST00000531303 UQCR10Q9UDW1 63 aa12.27□□□□□ -0.44
SMPD1-205ENST00000531303 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.44
SMPD1-205ENST00000531303 LOC107984640A0A0U1RRK4 108 aa12.27□□□□□ -0.45
SMPD1-205ENST00000531303 LINC00587B1AMM8 73 aa12.27□□□□□ -0.45
SMPD1-205ENST00000531303 A0A1B0GVY2 172 aa12.26□□□□□ -0.45
SMPD1-205ENST00000531303 NDUFC2-KCTD14E9PQ53 114 aa12.26□□□□□ -0.45
SMPD1-205ENST00000531303 COX17Q14061 63 aa12.26□□□□□ -0.45
SMPD1-205ENST00000531303 Q6ZRP5 223 aa12.26□□□□□ -0.45
SMPD1-205ENST00000531303 PKD1P98161 4303 aa12.25□□□□□ -0.45
SMPD1-205ENST00000531303 MIR7-3HGQ8N6C7 128 aa12.25□□□□□ -0.45
SMPD1-205ENST00000531303 LITAFQ99732 161 aa12.25□□□□□ -0.45
SMPD1-205ENST00000531303 IGKV2-24A0A0C4DH68 120 aa12.24□□□□□ -0.45
SMPD1-205ENST00000531303 NPC2P61916 151 aa12.24□□□□□ -0.45
SMPD1-205ENST00000531303 SDIM1Q6ZPB5 146 aa12.24□□□□□ -0.45
SMPD1-205ENST00000531303 TIMM17BO60830 172 aa12.23□□□□□ -0.45
SMPD1-205ENST00000531303 TLX1NBP0CAT3 122 aa12.23□□□□□ -0.45
SMPD1-205ENST00000531303 C2orf91Q6ZV80 131 aa12.23□□□□□ -0.45
SMPD1-205ENST00000531303 MIEN1Q9BRT3 115 aa12.23□□□□□ -0.45
SMPD1-205ENST00000531303 XAGE1AQ9HD64 81 aa12.23□□□□□ -0.45
SMPD1-205ENST00000531303 TMEM238C9JI98 176 aa12.22□□□□□ -0.45
SMPD1-205ENST00000531303 TSTD3H0UI37 97 aa12.22□□□□□ -0.45
SMPD1-205ENST00000531303 GCSHP23434 173 aa12.22□□□□□ -0.45
SMPD1-205ENST00000531303 HECTD4Q9Y4D8 3996 aa12.22□□□□□ -0.45
SMPD1-205ENST00000531303 A0A096LNI7 61 aa12.21□□□□□ -0.45
SMPD1-205ENST00000531303 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
SMPD1-205ENST00000531303 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMPD1-205ENST00000531303 SND1-IT1Q9HBX3 110 aa12.21□□□□□ -0.45
SMPD1-205ENST00000531303 HNRNPA3P51991 378 aaKnown RBP12.2□□□□□ -0.46
SMPD1-205ENST00000531303 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
SMPD1-205ENST00000531303 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
SMPD1-205ENST00000531303 DNAH5Q8TE73 4624 aa12.2□□□□□ -0.46
SMPD1-205ENST00000531303 HIST1H4GQ99525 98 aa12.19□□□□□ -0.46
SMPD1-205ENST00000531303 C16orf90A8MZG2 172 aa12.18□□□□□ -0.46
SMPD1-205ENST00000531303 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
SMPD1-205ENST00000531303 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
SMPD1-205ENST00000531303 SPANXDQ9BXN6 97 aa12.18□□□□□ -0.46
SMPD1-205ENST00000531303 SPANXCQ9NY87 97 aa12.18□□□□□ -0.46
SMPD1-205ENST00000531303 PKIGQ9Y2B9 76 aa12.18□□□□□ -0.46
SMPD1-205ENST00000531303 EIF4EBP3O60516 100 aaPredicted RBP12.17□□□□□ -0.46
SMPD1-205ENST00000531303 C9orf129Q5T035 196 aaKnown RBP12.17□□□□□ -0.46
SMPD1-205ENST00000531303 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
SMPD1-205ENST00000531303 PANO1I0J062 215 aa12.16□□□□□ -0.46
SMPD1-205ENST00000531303 SOSTDC1Q6X4U4 206 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 251.2 ms