RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CXCL5P42830 114 aa10.92□□□□□ -0.66
SF3B2-211ENST00000531041 RNF151Q2KHN1 245 aa10.92□□□□□ -0.66
SF3B2-211ENST00000531041 C2orf82Q6UX34 121 aa10.92□□□□□ -0.66
SF3B2-211ENST00000531041 UNQ6190/PRO20217Q6UXQ8 127 aa10.92□□□□□ -0.66
SF3B2-211ENST00000531041 AKR1D1P51857 326 aa10.92□□□□□ -0.66
SF3B2-211ENST00000531041 C10orf25Q5T742 122 aa10.92□□□□□ -0.66
SF3B2-211ENST00000531041 KRTAP10-1P60331 282 aa10.91□□□□□ -0.66
SF3B2-211ENST00000531041 HERVK_113P61574 105 aa10.91□□□□□ -0.66
SF3B2-211ENST00000531041 TRBV30A0A0K0K1B3 111 aa10.9□□□□□ -0.66
SF3B2-211ENST00000531041 SDIM1Q6ZPB5 146 aa10.9□□□□□ -0.66
SF3B2-211ENST00000531041 C6orf48Q9UBA6 75 aa10.9□□□□□ -0.66
SF3B2-211ENST00000531041 DNAH5Q8TE73 4624 aa10.89□□□□□ -0.67
SF3B2-211ENST00000531041 LEPROTO15243 131 aa10.88□□□□□ -0.67
SF3B2-211ENST00000531041 SFTA2Q6UW10 78 aa10.88□□□□□ -0.67
SF3B2-211ENST00000531041 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
SF3B2-211ENST00000531041 EPPK1P58107 5090 aaKnown RBP10.87□□□□□ -0.67
SF3B2-211ENST00000531041 E9PLD3 99 aa10.86□□□□□ -0.67
SF3B2-211ENST00000531041 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
SF3B2-211ENST00000531041 LOC107984640A0A0U1RRK4 108 aa10.85□□□□□ -0.67
SF3B2-211ENST00000531041 TLX1NBP0CAT3 122 aa10.85□□□□□ -0.67
SF3B2-211ENST00000531041 Q6ZSA8 131 aa10.85□□□□□ -0.67
SF3B2-211ENST00000531041 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
SF3B2-211ENST00000531041 STPG4Q8N801 248 aa10.85□□□□□ -0.67
SF3B2-211ENST00000531041 ZNF625Q96I27 306 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-211ENST00000531041 J3QQQ9 107 aa10.84□□□□□ -0.67
SF3B2-211ENST00000531041 C9orf116Q5BN46 136 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-211ENST00000531041 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
SF3B2-211ENST00000531041 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
SF3B2-211ENST00000531041 FAM30AQ9NZY2 134 aa10.83□□□□□ -0.68
SF3B2-211ENST00000531041 NDUFA12Q9UI09 145 aa10.83□□□□□ -0.68
SF3B2-211ENST00000531041 A0A096LNI7 61 aa10.82□□□□□ -0.68
SF3B2-211ENST00000531041 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
SF3B2-211ENST00000531041 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
SF3B2-211ENST00000531041 LGALS3P17931 250 aaKnown RBP10.81□□□□□ -0.68
SF3B2-211ENST00000531041 NMUP48645 174 aa10.81□□□□□ -0.68
SF3B2-211ENST00000531041 HERV-K104P63124 156 aa10.81□□□□□ -0.68
SF3B2-211ENST00000531041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.81□□□□□ -0.68
SF3B2-211ENST00000531041 DYNC1H1Q14204 4646 aaKnown RBP10.8□□□□□ -0.68
SF3B2-211ENST00000531041 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
SF3B2-211ENST00000531041 PANO1I0J062 215 aa10.8□□□□□ -0.68
SF3B2-211ENST00000531041 PTTG1IPP53801 180 aa10.8□□□□□ -0.68
SF3B2-211ENST00000531041 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
SF3B2-211ENST00000531041 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
SF3B2-211ENST00000531041 Q6ZRP5 223 aa10.8□□□□□ -0.68
SF3B2-211ENST00000531041 LINC00474Q9P2X8 69 aa10.8□□□□□ -0.68
SF3B2-211ENST00000531041 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 IGKV2-24A0A0C4DH68 120 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 CHTF8P0CG12 524 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 GAGE2BQ13066 116 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 COX17Q14061 63 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 ANKRD39Q53RE8 183 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 ERG28Q9UKR5 140 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 LRP1BQ9NZR2 4599 aa10.79□□□□□ -0.68
SF3B2-211ENST00000531041 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
SF3B2-211ENST00000531041 MAJINQ3KP22 176 aa10.77□□□□□ -0.68
SF3B2-211ENST00000531041 HSBP1L1C9JCN9 74 aa10.76□□□□□ -0.69
SF3B2-211ENST00000531041 XGP55808 180 aa10.76□□□□□ -0.69
SF3B2-211ENST00000531041 LINC00587B1AMM8 73 aa10.75□□□□□ -0.69
SF3B2-211ENST00000531041 PFN2P35080 140 aa10.75□□□□□ -0.69
SF3B2-211ENST00000531041 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
SF3B2-211ENST00000531041 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
SF3B2-211ENST00000531041 DPH3Q96FX2 82 aa10.75□□□□□ -0.69
SF3B2-211ENST00000531041 DNAH8Q96JB1 4490 aa10.74□□□□□ -0.69
SF3B2-211ENST00000531041 SCXQ7RTU7 201 aa10.74□□□□□ -0.69
SF3B2-211ENST00000531041 CIRBP-AS1Q8TBR5 109 aa10.74□□□□□ -0.69
SF3B2-211ENST00000531041 A0A087WYN8 130 aa10.73□□□□□ -0.69
SF3B2-211ENST00000531041 ZNF815PA8K554 130 aa10.73□□□□□ -0.69
SF3B2-211ENST00000531041 PYY3Q5JQD4 70 aa10.73□□□□□ -0.69
SF3B2-211ENST00000531041 MEIG1Q5JSS6 88 aa10.73□□□□□ -0.69
SF3B2-211ENST00000531041 PLAC8Q9NZF1 115 aa10.73□□□□□ -0.69
SF3B2-211ENST00000531041 SMIM13P0DJ93 91 aa10.72□□□□□ -0.69
SF3B2-211ENST00000531041 LINC00158P58513 81 aa10.72□□□□□ -0.69
SF3B2-211ENST00000531041 C9orf129Q5T035 196 aaKnown RBP10.72□□□□□ -0.69
SF3B2-211ENST00000531041 TTTY13Q9BZ97 58 aa10.72□□□□□ -0.69
SF3B2-211ENST00000531041 A0A0J9YXY3 114 aa10.71□□□□□ -0.69
SF3B2-211ENST00000531041 EPM2AB3EWF7 344 aa10.71□□□□□ -0.69
SF3B2-211ENST00000531041 HAMPP81172 84 aa10.71□□□□□ -0.69
SF3B2-211ENST00000531041 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
SF3B2-211ENST00000531041 PCP2Q8IVA1 136 aa10.7□□□□□ -0.7
SF3B2-211ENST00000531041 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
SF3B2-211ENST00000531041 A0A1W2PNN7 141 aa10.69□□□□□ -0.7
SF3B2-211ENST00000531041 SND1-IT1Q9HBX3 110 aa10.69□□□□□ -0.7
SF3B2-211ENST00000531041 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
SF3B2-211ENST00000531041 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
SF3B2-211ENST00000531041 TIMM17BO60830 172 aa10.67□□□□□ -0.7
SF3B2-211ENST00000531041 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
SF3B2-211ENST00000531041 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
SF3B2-211ENST00000531041 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
SF3B2-211ENST00000531041 PAM16Q9Y3D7 125 aa10.67□□□□□ -0.7
SF3B2-211ENST00000531041 SPATA45Q537H7 98 aa10.66□□□□□ -0.7
SF3B2-211ENST00000531041 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.7
SF3B2-211ENST00000531041 KRTAP7-1Q8IUC3 87 aa10.65□□□□□ -0.7
SF3B2-211ENST00000531041 LITAFQ99732 161 aa10.65□□□□□ -0.7
SF3B2-211ENST00000531041 COX8AP10176 69 aa10.64□□□□□ -0.71
SF3B2-211ENST00000531041 ADAMTSL4-AS1Q5T5F5 129 aa10.64□□□□□ -0.71
SF3B2-211ENST00000531041 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
SF3B2-211ENST00000531041 FAM19A5Q7Z5A7 132 aaPredicted RBP10.64□□□□□ -0.71
SF3B2-211ENST00000531041 BIRC6Q9NR09 4857 aa10.64□□□□□ -0.71
SF3B2-211ENST00000531041 LOC107984156A0A0G2JMH3 177 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms