RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 VPREB1P12018 145 aa5.96□□□□□ -1.46
CTNND1-227ENST00000530748 C11orf72Q8NBR9 251 aa5.96□□□□□ -1.46
CTNND1-227ENST00000530748 LINC00208Q96KT6 92 aa5.96□□□□□ -1.46
CTNND1-227ENST00000530748 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
CTNND1-227ENST00000530748 DSCAMO60469 2012 aa5.95□□□□□ -1.46
CTNND1-227ENST00000530748 EXPH5Q8NEV8 1989 aa5.95□□□□□ -1.46
CTNND1-227ENST00000530748 A0A087WVE0 104 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 H0Y9P7 68 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 LINC01547P58512 204 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-227ENST00000530748 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 FAM208BQ5VWN6 2430 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 KIF25-AS1Q9Y6Z4 181 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 NBASA2RRP1 2371 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
CTNND1-227ENST00000530748 TRBV7-6A0A0J9YX20 115 aa5.93□□□□□ -1.46
CTNND1-227ENST00000530748 A0A087WSZ3 146 aa5.93□□□□□ -1.46
CTNND1-227ENST00000530748 NOTCH3Q9UM47 2321 aa5.93□□□□□ -1.46
CTNND1-227ENST00000530748 Q8N3U1 123 aa5.92□□□□□ -1.46
CTNND1-227ENST00000530748 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
CTNND1-227ENST00000530748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.92□□□□□ -1.469e-7■■■□□ 18
CTNND1-227ENST00000530748 IGLV5-39A0A0G2JS06 123 aa5.92□□□□□ -1.46
CTNND1-227ENST00000530748 CXCL6P80162 114 aa5.92□□□□□ -1.46
CTNND1-227ENST00000530748 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
CTNND1-227ENST00000530748 MUC6Q6W4X9 2439 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 PCNX2A6NKB5 2137 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 HCFC1P51610 2035 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 TANC2Q9HCD6 1990 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 PRLHP81277 87 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 PMAIP1Q13794 54 aa5.91□□□□□ -1.46
CTNND1-227ENST00000530748 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
CTNND1-227ENST00000530748 MDFIQ99750 246 aa5.9□□□□□ -1.46
CTNND1-227ENST00000530748 FREM1Q5H8C1 2179 aa5.9□□□□□ -1.46
CTNND1-227ENST00000530748 EML5Q05BV3 1969 aa5.9□□□□□ -1.46
CTNND1-227ENST00000530748 CACNA1HO95180 2353 aa5.9□□□□□ -1.46
CTNND1-227ENST00000530748 H3BNG1 76 aa5.9□□□□□ -1.47
CTNND1-227ENST00000530748 A8MTW9 85 aa5.89□□□□□ -1.47
CTNND1-227ENST00000530748 SBSPONQ8IVN8 264 aa5.89□□□□□ -1.47
CTNND1-227ENST00000530748 PLA2G1BP04054 148 aaKnown RBP5.89□□□□□ -1.47
CTNND1-227ENST00000530748 PLCE1Q9P212 2302 aa5.89□□□□□ -1.47
CTNND1-227ENST00000530748 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
CTNND1-227ENST00000530748 KIAA0087Q14695 138 aa5.88□□□□□ -1.47
CTNND1-227ENST00000530748 LINC00846Q9NV44 126 aa5.88□□□□□ -1.47
CTNND1-227ENST00000530748 SOSTDC1Q6X4U4 206 aa5.87□□□□□ -1.47
CTNND1-227ENST00000530748 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
CTNND1-227ENST00000530748 NOTCH2Q04721 2471 aa5.87□□□□□ -1.47
CTNND1-227ENST00000530748 LINC00315P59091 139 aa5.87□□□□□ -1.47
CTNND1-227ENST00000530748 C6orf48Q9UBA6 75 aa5.87□□□□□ -1.47
CTNND1-227ENST00000530748 IGLV5-45A0A087WSX0 123 aa5.86□□□□□ -1.47
CTNND1-227ENST00000530748 MED13LQ71F56 2210 aa5.86□□□□□ -1.47
CTNND1-227ENST00000530748 C16orf90A8MZG2 172 aa5.86□□□□□ -1.47
CTNND1-227ENST00000530748 TMEM254Q8TBM7 123 aa5.86□□□□□ -1.47
CTNND1-227ENST00000530748 ELOF1P60002 83 aaKnown RBP5.86□□□□□ -1.47
CTNND1-227ENST00000530748 SPATA3Q8NHX4 192 aa5.85□□□□□ -1.47
CTNND1-227ENST00000530748 LINC00167Q96N53 147 aa5.85□□□□□ -1.47
CTNND1-227ENST00000530748 SMIM29Q86T20 159 aa5.85□□□□□ -1.47
CTNND1-227ENST00000530748 IGHV3OR16-9A0A0B4J2B5 98 aa5.85□□□□□ -1.47
CTNND1-227ENST00000530748 SPINK1P00995 79 aa5.85□□□□□ -1.47
CTNND1-227ENST00000530748 C7orf65Q6ZTY9 151 aa5.85□□□□□ -1.47
CTNND1-227ENST00000530748 C1orf64Q8NEQ6 169 aa5.84□□□□□ -1.47
CTNND1-227ENST00000530748 COL27A1Q8IZC6 1860 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-227ENST00000530748 CRYGAP11844 174 aa5.84□□□□□ -1.47
CTNND1-227ENST00000530748 WWC2-AS2Q96NR7 200 aa5.84□□□□□ -1.48
CTNND1-227ENST00000530748 SERTAD4-AS1Q5TG53 156 aa5.83□□□□□ -1.48
CTNND1-227ENST00000530748 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
CTNND1-227ENST00000530748 TNCP24821 2201 aa5.83□□□□□ -1.48
CTNND1-227ENST00000530748 A0A1B0GW54 56 aa5.83□□□□□ -1.48
CTNND1-227ENST00000530748 MOBPQ13875 183 aa5.82□□□□□ -1.48
CTNND1-227ENST00000530748 RTL8CO15255 209 aa5.82□□□□□ -1.48
CTNND1-227ENST00000530748 PSPHP1O15172 72 aa5.82□□□□□ -1.48
CTNND1-227ENST00000530748 OTOGLQ3ZCN5 2332 aa5.82□□□□□ -1.48
CTNND1-227ENST00000530748 CDIP1Q9H305 208 aa5.81□□□□□ -1.48
CTNND1-227ENST00000530748 PTPRBP23467 1997 aa5.81□□□□□ -1.48
CTNND1-227ENST00000530748 Q8NBF4 154 aa5.81□□□□□ -1.48
CTNND1-227ENST00000530748 ZFHX2Q9C0A1 2572 aaPredicted RBP5.81□□□□□ -1.48
CTNND1-227ENST00000530748 LOC110117498A0A087WWA1 95 aa5.81□□□□□ -1.48
CTNND1-227ENST00000530748 PHF5AQ7RTV0 110 aaKnown RBP5.81□□□□□ -1.48
CTNND1-227ENST00000530748 BCE1O60756 84 aa5.8□□□□□ -1.48
CTNND1-227ENST00000530748 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
CTNND1-227ENST00000530748 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
CTNND1-227ENST00000530748 KRTAP24-1Q3LI83 254 aa5.8□□□□□ -1.48
CTNND1-227ENST00000530748 Q6ZRX8 168 aa5.8□□□□□ -1.48
CTNND1-227ENST00000530748 FAM218AQ96MZ4 157 aa5.8□□□□□ -1.48
CTNND1-227ENST00000530748 KLK9Q2XQG4 91 aa5.79□□□□□ -1.48
CTNND1-227ENST00000530748 Q6ZQT0 140 aa5.79□□□□□ -1.48
CTNND1-227ENST00000530748 Q8NAQ8 132 aa5.79□□□□□ -1.48
CTNND1-227ENST00000530748 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
CTNND1-227ENST00000530748 NBDYA0A0U1RRE5 68 aa5.79□□□□□ -1.48
CTNND1-227ENST00000530748 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
CTNND1-227ENST00000530748 ACYP2P14621 99 aa5.78□□□□□ -1.48
CTNND1-227ENST00000530748 DSCAML1Q8TD84 2053 aa5.78□□□□□ -1.48
CTNND1-227ENST00000530748 LINC00588Q9Y4M8 146 aa5.78□□□□□ -1.48
CTNND1-227ENST00000530748 EPM2AB3EWF7 344 aa5.78□□□□□ -1.48
CTNND1-227ENST00000530748 LINC00476Q8WZB0 136 aa5.78□□□□□ -1.48
CTNND1-227ENST00000530748 TET2Q6N021 2002 aaPredicted RBP5.77□□□□□ -1.49
CTNND1-227ENST00000530748 Q6ZRP5 223 aa5.77□□□□□ -1.49
CTNND1-227ENST00000530748 SONP18583 2426 aaKnown RBP5.77□□□□□ -1.49
CTNND1-227ENST00000530748 H3BPC8 53 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 PRR14LQ5THK1 2151 aa5.76□□□□□ -1.49
CTNND1-227ENST00000530748 SMCPP49901 116 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms