RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 EDN2P20800 178 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 REG3GQ6UW15 175 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 SMIM11BQ8TCY0 68 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 C3orf84H3BNL1 204 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 LINC01561Q8N1V8 128 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 LAMA3Q16787 3333 aa6.12□□□□□ -1.43
CTNND1-225ENST00000530094 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
CTNND1-225ENST00000530094 RPL37AP8A6NKH3 93 aa6.11□□□□□ -1.43
CTNND1-225ENST00000530094 FAM240AA0A1B0GVK7 77 aa6.11□□□□□ -1.43
CTNND1-225ENST00000530094 CSDC2Q9Y534 153 aaKnown RBP6.1□□□□□ -1.43
CTNND1-225ENST00000530094 HRCT1Q6UXD1 115 aa6.1□□□□□ -1.43
CTNND1-225ENST00000530094 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
CTNND1-225ENST00000530094 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
CTNND1-225ENST00000530094 CHD9Q3L8U1 2897 aa6.1□□□□□ -1.43
CTNND1-225ENST00000530094 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
CTNND1-225ENST00000530094 PRRC2CQ9Y520 2896 aaKnown RBP6.1□□□□□ -1.43
CTNND1-225ENST00000530094 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.43
CTNND1-225ENST00000530094 PCSK5Q92824 1860 aa6.09□□□□□ -1.43
CTNND1-225ENST00000530094 SERP2Q8N6R1 65 aa6.09□□□□□ -1.43
CTNND1-225ENST00000530094 RETNQ9HD89 108 aa6.09□□□□□ -1.43
CTNND1-225ENST00000530094 PRM2P04554 102 aa6.09□□□□□ -1.43
CTNND1-225ENST00000530094 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
CTNND1-225ENST00000530094 IGIPA6NJ69 53 aa6.08□□□□□ -1.44
CTNND1-225ENST00000530094 PRYO14603 147 aa6.08□□□□□ -1.44
CTNND1-225ENST00000530094 MRPS12O15235 138 aaKnown RBP6.08□□□□□ -1.44
CTNND1-225ENST00000530094 LINC00526Q96FQ7 95 aa6.08□□□□□ -1.44
CTNND1-225ENST00000530094 FHL2Q14192 279 aa6.08□□□□□ -1.44
CTNND1-225ENST00000530094 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 BEAN1Q3B7T3 259 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 YPEL4Q96NS1 127 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 A8MZ25 164 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 BRCA2P51587 3418 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 A0A1B0GUV1 79 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 COX8CQ7Z4L0 72 aa6.07□□□□□ -1.44
CTNND1-225ENST00000530094 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
CTNND1-225ENST00000530094 Q6ZVQ6 151 aa6.06□□□□□ -1.44
CTNND1-225ENST00000530094 NTM-AS1Q6ZSK4 140 aa6.06□□□□□ -1.44
CTNND1-225ENST00000530094 SMIM1B2RUZ4 78 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 UNQ6190/PRO20217Q6UXQ8 127 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 C6orf223Q8N319 242 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 Q6ZTC4 211 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 Q8N814 137 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 KRTAP24-1Q3LI83 254 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 POM121L12Q8N7R1 296 aa6.05□□□□□ -1.44
CTNND1-225ENST00000530094 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
CTNND1-225ENST00000530094 DSCAML1Q8TD84 2053 aa6.04□□□□□ -1.44
CTNND1-225ENST00000530094 TRBV10-3A0A0K0K1G6 114 aa6.04□□□□□ -1.44
CTNND1-225ENST00000530094 ESRGQ1W209 222 aa6.03□□□□□ -1.44
CTNND1-225ENST00000530094 C2orf91Q6ZV80 131 aa6.03□□□□□ -1.44
CTNND1-225ENST00000530094 AMELXQ99217 191 aa6.03□□□□□ -1.44
CTNND1-225ENST00000530094 LYPD5Q6UWN5 251 aa6.03□□□□□ -1.44
CTNND1-225ENST00000530094 Q8N2B8 174 aa6.02□□□□□ -1.45
CTNND1-225ENST00000530094 LINC01556Q5JQF7 62 aa6.02□□□□□ -1.45
CTNND1-225ENST00000530094 Q9BRP9 147 aa6.02□□□□□ -1.45
CTNND1-225ENST00000530094 COX7CP15954 63 aa6.02□□□□□ -1.45
CTNND1-225ENST00000530094 TRAV7A0A075B6U4 112 aa6.01□□□□□ -1.45
CTNND1-225ENST00000530094 FAM30AQ9NZY2 134 aa6.01□□□□□ -1.45
CTNND1-225ENST00000530094 TET2Q6N021 2002 aaPredicted RBP6.01□□□□□ -1.45
CTNND1-225ENST00000530094 Q6Q795 121 aa6.01□□□□□ -1.45
CTNND1-225ENST00000530094 PRUNE2Q8WUY3 3088 aa6.01□□□□□ -1.45
CTNND1-225ENST00000530094 IGLV4-60A0A075B6I1 120 aa6□□□□□ -1.45
CTNND1-225ENST00000530094 A6NED7 52 aa6□□□□□ -1.45
CTNND1-225ENST00000530094 A0A0C4DFX4 3053 aa6□□□□□ -1.45
CTNND1-225ENST00000530094 FHL3Q13643 280 aa6□□□□□ -1.45
CTNND1-225ENST00000530094 COX6A2Q02221 97 aa5.99□□□□□ -1.45
CTNND1-225ENST00000530094 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
CTNND1-225ENST00000530094 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
CTNND1-225ENST00000530094 GAS8-AS1O95177 125 aa5.98□□□□□ -1.45
CTNND1-225ENST00000530094 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
CTNND1-225ENST00000530094 LINC00694P0DN24 101 aa5.98□□□□□ -1.45
CTNND1-225ENST00000530094 C9orf116Q5BN46 136 aaPredicted RBP5.98□□□□□ -1.45
CTNND1-225ENST00000530094 H3BNG1 76 aa5.97□□□□□ -1.45
CTNND1-225ENST00000530094 TRANK1O15050 2925 aa5.97□□□□□ -1.45
CTNND1-225ENST00000530094 HELZ2Q9BYK8 2649 aaKnown RBP5.97□□□□□ -1.45
CTNND1-225ENST00000530094 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
CTNND1-225ENST00000530094 A0A087WYN8 130 aa5.95□□□□□ -1.46
CTNND1-225ENST00000530094 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
CTNND1-225ENST00000530094 LINC00575Q6W349 94 aa5.95□□□□□ -1.46
CTNND1-225ENST00000530094 LINC00337Q8N6G1 96 aa5.94□□□□□ -1.46
CTNND1-225ENST00000530094 TRBV7-6A0A0J9YX20 115 aa5.94□□□□□ -1.46
CTNND1-225ENST00000530094 COL27A1Q8IZC6 1860 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-225ENST00000530094 Q6ZRU5 148 aa5.94□□□□□ -1.46
CTNND1-225ENST00000530094 MDFIQ99750 246 aa5.93□□□□□ -1.46
CTNND1-225ENST00000530094 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
CTNND1-225ENST00000530094 CELA1Q9UNI1 258 aa5.93□□□□□ -1.46
CTNND1-225ENST00000530094 A0A087WSZ3 146 aa5.93□□□□□ -1.46
CTNND1-225ENST00000530094 A0A1B0GW54 56 aa5.93□□□□□ -1.46
CTNND1-225ENST00000530094 Q6ZSN1 163 aa5.93□□□□□ -1.46
CTNND1-225ENST00000530094 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
CTNND1-225ENST00000530094 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
CTNND1-225ENST00000530094 URB1-AS1Q96HZ7 61 aa5.92□□□□□ -1.46
CTNND1-225ENST00000530094 HCG22E2RYF7 251 aa5.92□□□□□ -1.46
CTNND1-225ENST00000530094 H0Y9P7 68 aa5.92□□□□□ -1.46
CTNND1-225ENST00000530094 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
CTNND1-225ENST00000530094 PRR4Q16378 134 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms