RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 LINC00308Q8TCZ7 52 aa10.46□□□□□ -0.74
CCDC90B-213ENST00000529611 C6orf226Q5I0X4 101 aa10.45□□□□□ -0.74
CCDC90B-213ENST00000529611 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
CCDC90B-213ENST00000529611 GAGE12HA6NDE8 117 aa10.44□□□□□ -0.74
CCDC90B-213ENST00000529611 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
CCDC90B-213ENST00000529611 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
CCDC90B-213ENST00000529611 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
CCDC90B-213ENST00000529611 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
CCDC90B-213ENST00000529611 CRPP02741 224 aa10.43□□□□□ -0.74
CCDC90B-213ENST00000529611 MALP21145 153 aa10.43□□□□□ -0.74
CCDC90B-213ENST00000529611 KIAA0087Q14695 138 aa10.43□□□□□ -0.74
CCDC90B-213ENST00000529611 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
CCDC90B-213ENST00000529611 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
CCDC90B-213ENST00000529611 IBA57-AS1B1ANH7 110 aa10.41□□□□□ -0.74
CCDC90B-213ENST00000529611 LINC01556Q5JQF7 62 aa10.41□□□□□ -0.74
CCDC90B-213ENST00000529611 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
CCDC90B-213ENST00000529611 MIR7-3HGQ8N6C7 128 aa10.41□□□□□ -0.74
CCDC90B-213ENST00000529611 COPS9Q8WXC6 57 aa10.41□□□□□ -0.74
CCDC90B-213ENST00000529611 DNHD1Q96M86 4753 aa10.4□□□□□ -0.74
CCDC90B-213ENST00000529611 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.74
CCDC90B-213ENST00000529611 ERG28Q9UKR5 140 aa10.4□□□□□ -0.74
CCDC90B-213ENST00000529611 LINC00158P58513 81 aa10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 LOC107984156A0A0G2JMH3 177 aa10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 H7C2G1 150 aa10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 CKS1BP61024 79 aa10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 ARL17AQ8IVW1 177 aa10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-213ENST00000529611 PFN2P35080 140 aa10.38□□□□□ -0.75
CCDC90B-213ENST00000529611 CXCL5P42830 114 aa10.38□□□□□ -0.75
CCDC90B-213ENST00000529611 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
CCDC90B-213ENST00000529611 KRTAP26-1Q6PEX3 210 aa10.37□□□□□ -0.75
CCDC90B-213ENST00000529611 DNAH10OSP0CZ25 163 aa10.37□□□□□ -0.75
CCDC90B-213ENST00000529611 H3BMG7 143 aa10.36□□□□□ -0.75
CCDC90B-213ENST00000529611 SPAG11BQ08648 103 aa10.36□□□□□ -0.75
CCDC90B-213ENST00000529611 Q1RN00 199 aa10.35□□□□□ -0.75
CCDC90B-213ENST00000529611 LYRM7Q5U5X0 104 aa10.35□□□□□ -0.75
CCDC90B-213ENST00000529611 PRKDCP78527 4128 aaKnown RBP10.35□□□□□ -0.75
CCDC90B-213ENST00000529611 RPL13AP40429 203 aaKnown RBP10.34□□□□□ -0.75
CCDC90B-213ENST00000529611 CCL18P55774 89 aa10.34□□□□□ -0.75
CCDC90B-213ENST00000529611 C6orf223Q8N319 242 aa10.34□□□□□ -0.75
CCDC90B-213ENST00000529611 PSMB2P49721 201 aa10.34□□□□□ -0.75
CCDC90B-213ENST00000529611 LINC00526Q96FQ7 95 aa10.34□□□□□ -0.75
CCDC90B-213ENST00000529611 TRBV30A0A0K0K1B3 111 aa10.33□□□□□ -0.76
CCDC90B-213ENST00000529611 TRIAP1O43715 76 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 TCL1BO95988 128 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 C1orf43Q9BWL3 253 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 COX17Q14061 63 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 C9orf116Q5BN46 136 aaPredicted RBP10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 UNQ6190/PRO20217Q6UXQ8 127 aa10.32□□□□□ -0.76
CCDC90B-213ENST00000529611 TRBV20-1A0A075B6N2 111 aa10.31□□□□□ -0.76
CCDC90B-213ENST00000529611 DYNC2H1Q8NCM8 4307 aaKnown RBP10.31□□□□□ -0.76
CCDC90B-213ENST00000529611 DNAH1Q9P2D7 4330 aa10.31□□□□□ -0.76
CCDC90B-213ENST00000529611 UPK3BQ9BT76 320 aa10.3□□□□□ -0.76
CCDC90B-213ENST00000529611 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
CCDC90B-213ENST00000529611 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
CCDC90B-213ENST00000529611 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
CCDC90B-213ENST00000529611 NHLRC4P0CG21 123 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-213ENST00000529611 NTN5Q8WTR8 489 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-213ENST00000529611 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
CCDC90B-213ENST00000529611 MTURNQ8N3F0 131 aa10.28□□□□□ -0.76
CCDC90B-213ENST00000529611 LINC00337Q8N6G1 96 aa10.28□□□□□ -0.76
CCDC90B-213ENST00000529611 C15orf56Q8N910 161 aa10.28□□□□□ -0.76
CCDC90B-213ENST00000529611 Q9HAA7 133 aa10.28□□□□□ -0.76
CCDC90B-213ENST00000529611 F8W1H4 67 aa10.28□□□□□ -0.76
CCDC90B-213ENST00000529611 LYSTQ99698 3801 aa10.27□□□□□ -0.76
CCDC90B-213ENST00000529611 HIGD2BQ4VC39 106 aa10.27□□□□□ -0.77
CCDC90B-213ENST00000529611 MEGF8Q7Z7M0 2845 aa10.27□□□□□ -0.77
CCDC90B-213ENST00000529611 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-213ENST00000529611 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
CCDC90B-213ENST00000529611 CSMD3Q7Z407 3707 aa10.26□□□□□ -0.77
CCDC90B-213ENST00000529611 ZNF561-AS1K7EIQ3 104 aa10.26□□□□□ -0.77
CCDC90B-213ENST00000529611 WFDC2Q14508 124 aa10.26□□□□□ -0.77
CCDC90B-213ENST00000529611 COX6CP09669 75 aa10.25□□□□□ -0.77
CCDC90B-213ENST00000529611 C6orf48Q9UBA6 75 aa10.25□□□□□ -0.77
CCDC90B-213ENST00000529611 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
CCDC90B-213ENST00000529611 MUC7Q8TAX7 377 aa10.23□□□□□ -0.77
CCDC90B-213ENST00000529611 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
CCDC90B-213ENST00000529611 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
CCDC90B-213ENST00000529611 CAMK2N2Q96S95 79 aa10.23□□□□□ -0.77
CCDC90B-213ENST00000529611 CLEC2BQ92478 149 aa10.22□□□□□ -0.77
CCDC90B-213ENST00000529611 C2orf48Q96LS8 159 aa10.22□□□□□ -0.77
CCDC90B-213ENST00000529611 DNAH7Q8WXX0 4024 aa10.22□□□□□ -0.77
CCDC90B-213ENST00000529611 OCIAD2Q56VL3 154 aa10.21□□□□□ -0.77
CCDC90B-213ENST00000529611 NDUFC2O95298 119 aa10.21□□□□□ -0.78
CCDC90B-213ENST00000529611 Q6ZRU5 148 aa10.21□□□□□ -0.78
CCDC90B-213ENST00000529611 PLECQ15149 4684 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-213ENST00000529611 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
CCDC90B-213ENST00000529611 KRTAP21-3Q3LHN1 58 aa10.2□□□□□ -0.78
CCDC90B-213ENST00000529611 Q8NDZ9 215 aa10.2□□□□□ -0.78
CCDC90B-213ENST00000529611 LST1O00453 97 aa10.19□□□□□ -0.78
CCDC90B-213ENST00000529611 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
CCDC90B-213ENST00000529611 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
CCDC90B-213ENST00000529611 CASC10Q5T4H9 136 aa10.19□□□□□ -0.78
CCDC90B-213ENST00000529611 C9JAW5 83 aa10.19□□□□□ -0.78
CCDC90B-213ENST00000529611 ETDBQ3ZM63 59 aa10.19□□□□□ -0.78
CCDC90B-213ENST00000529611 RMI2Q96E14 147 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms