RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 NDUFA1O15239 70 aa10.04□□□□□ -0.8
LTBP3-209ENST00000527792 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
LTBP3-209ENST00000527792 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
LTBP3-209ENST00000527792 C2orf48Q96LS8 159 aa10.04□□□□□ -0.8
LTBP3-209ENST00000527792 KRTAP4-5Q9BYR2 181 aa10.04□□□□□ -0.8
LTBP3-209ENST00000527792 J3QQQ9 107 aa10.03□□□□□ -0.8
LTBP3-209ENST00000527792 CXCL5P42830 114 aa10.03□□□□□ -0.8
LTBP3-209ENST00000527792 NMUP48645 174 aa10.03□□□□□ -0.8
LTBP3-209ENST00000527792 SYCNQ0VAF6 134 aa10.03□□□□□ -0.8
LTBP3-209ENST00000527792 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
LTBP3-209ENST00000527792 FAT2Q9NYQ8 4349 aa10.03□□□□□ -0.8
LTBP3-209ENST00000527792 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
LTBP3-209ENST00000527792 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
LTBP3-209ENST00000527792 UNQ6190/PRO20217Q6UXQ8 127 aa10.02□□□□□ -0.81
LTBP3-209ENST00000527792 CARD19Q96LW7 228 aa10.02□□□□□ -0.81
LTBP3-209ENST00000527792 VAMP8Q9BV40 100 aa10.02□□□□□ -0.81
LTBP3-209ENST00000527792 PKHD1P08F94 4074 aa10.02□□□□□ -0.81
LTBP3-209ENST00000527792 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
LTBP3-209ENST00000527792 ABCA13Q86UQ4 5058 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 IGKV2D-26A0A0A0MRZ7 120 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 F8WDY8 70 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 Q6ZRU5 148 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 PAM16Q9Y3D7 125 aa10.01□□□□□ -0.81
LTBP3-209ENST00000527792 SLPIP03973 132 aa10□□□□□ -0.81
LTBP3-209ENST00000527792 C10orf25Q5T742 122 aa10□□□□□ -0.81
LTBP3-209ENST00000527792 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
LTBP3-209ENST00000527792 NDUFA12Q9UI09 145 aa10□□□□□ -0.81
LTBP3-209ENST00000527792 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
LTBP3-209ENST00000527792 SPATA45Q537H7 98 aa9.99□□□□□ -0.81
LTBP3-209ENST00000527792 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
LTBP3-209ENST00000527792 CNBPP62633 177 aaKnown RBP9.98□□□□□ -0.81
LTBP3-209ENST00000527792 S100A12P80511 92 aa9.98□□□□□ -0.81
LTBP3-209ENST00000527792 SFTA2Q6UW10 78 aa9.98□□□□□ -0.81
LTBP3-209ENST00000527792 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
LTBP3-209ENST00000527792 ZNF815PA8K554 130 aa9.97□□□□□ -0.81
LTBP3-209ENST00000527792 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
LTBP3-209ENST00000527792 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
LTBP3-209ENST00000527792 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
LTBP3-209ENST00000527792 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
LTBP3-209ENST00000527792 DNAH11Q96DT5 4516 aa9.97□□□□□ -0.81
LTBP3-209ENST00000527792 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.82
LTBP3-209ENST00000527792 SMIM6P0DI80 62 aa9.96□□□□□ -0.82
LTBP3-209ENST00000527792 HERV-K104P63124 156 aa9.96□□□□□ -0.82
LTBP3-209ENST00000527792 MEIG1Q5JSS6 88 aa9.96□□□□□ -0.82
LTBP3-209ENST00000527792 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
LTBP3-209ENST00000527792 C9orf116Q5BN46 136 aaPredicted RBP9.95□□□□□ -0.82
LTBP3-209ENST00000527792 PCP2Q8IVA1 136 aa9.95□□□□□ -0.82
LTBP3-209ENST00000527792 PKD1P98161 4303 aa9.95□□□□□ -0.82
LTBP3-209ENST00000527792 PFN2P35080 140 aa9.94□□□□□ -0.82
LTBP3-209ENST00000527792 RNF151Q2KHN1 245 aa9.94□□□□□ -0.82
LTBP3-209ENST00000527792 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
LTBP3-209ENST00000527792 A0A0U1RRA0 63 aa9.93□□□□□ -0.82
LTBP3-209ENST00000527792 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
LTBP3-209ENST00000527792 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
LTBP3-209ENST00000527792 GCSHP23434 173 aa9.92□□□□□ -0.82
LTBP3-209ENST00000527792 LINC00158P58513 81 aa9.92□□□□□ -0.82
LTBP3-209ENST00000527792 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
LTBP3-209ENST00000527792 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
LTBP3-209ENST00000527792 C14orf144Q96I85 54 aa9.92□□□□□ -0.82
LTBP3-209ENST00000527792 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
LTBP3-209ENST00000527792 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
LTBP3-209ENST00000527792 COX8AP10176 69 aa9.91□□□□□ -0.82
LTBP3-209ENST00000527792 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
LTBP3-209ENST00000527792 PKIGQ9Y2B9 76 aa9.91□□□□□ -0.82
LTBP3-209ENST00000527792 SMIM13P0DJ93 91 aa9.9□□□□□ -0.82
LTBP3-209ENST00000527792 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
LTBP3-209ENST00000527792 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
LTBP3-209ENST00000527792 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
LTBP3-209ENST00000527792 C12orf57Q99622 126 aa9.89□□□□□ -0.83
LTBP3-209ENST00000527792 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
LTBP3-209ENST00000527792 IGKV2-24A0A0C4DH68 120 aa9.88□□□□□ -0.83
LTBP3-209ENST00000527792 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
LTBP3-209ENST00000527792 COX17Q14061 63 aa9.88□□□□□ -0.83
LTBP3-209ENST00000527792 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 Q6ZRP5 223 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 BOD1L2Q8IYS8 172 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 DPH3Q96FX2 82 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
LTBP3-209ENST00000527792 A0A096LNI7 61 aa9.86□□□□□ -0.83
LTBP3-209ENST00000527792 DLEU1O43261 78 aa9.85□□□□□ -0.83
LTBP3-209ENST00000527792 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
LTBP3-209ENST00000527792 DAND5Q8N907 189 aa9.85□□□□□ -0.83
LTBP3-209ENST00000527792 PRO1933Q9H354 126 aa9.85□□□□□ -0.83
LTBP3-209ENST00000527792 HSPG2P98160 4391 aa9.85□□□□□ -0.83
LTBP3-209ENST00000527792 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
LTBP3-209ENST00000527792 TIMM17BO60830 172 aa9.84□□□□□ -0.83
LTBP3-209ENST00000527792 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
LTBP3-209ENST00000527792 PTTG1IPP53801 180 aa9.84□□□□□ -0.83
LTBP3-209ENST00000527792 KRTAP10-1P60331 282 aa9.84□□□□□ -0.83
LTBP3-209ENST00000527792 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
LTBP3-209ENST00000527792 NPC2P61916 151 aa9.83□□□□□ -0.84
LTBP3-209ENST00000527792 LINC00518Q8N0U6 118 aa9.83□□□□□ -0.84
LTBP3-209ENST00000527792 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
LTBP3-209ENST00000527792 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
LTBP3-209ENST00000527792 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms