RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 LINC01560Q8TB33 94 aa5.28□□□□□ -1.56
SOX6-208ENST00000527619 RPL36ALQ969Q0 106 aaKnown RBP5.28□□□□□ -1.56
SOX6-208ENST00000527619 FASNP49327 2511 aaKnown RBP5.28□□□□□ -1.56
SOX6-208ENST00000527619 JMJD7-PLA2G4BH0Y9G9 81 aa5.28□□□□□ -1.56
SOX6-208ENST00000527619 C7orf65Q6ZTY9 151 aa5.27□□□□□ -1.57
SOX6-208ENST00000527619 UBL5Q9BZL1 73 aa5.27□□□□□ -1.57
SOX6-208ENST00000527619 DCHS2Q6V1P9 2916 aa5.26□□□□□ -1.57
SOX6-208ENST00000527619 PSPHP1O15172 72 aa5.26□□□□□ -1.57
SOX6-208ENST00000527619 IGHV3-53P01767 116 aa5.26□□□□□ -1.57
SOX6-208ENST00000527619 HTN1P15515 57 aa5.26□□□□□ -1.57
SOX6-208ENST00000527619 HELZ2Q9BYK8 2649 aaKnown RBP5.26□□□□□ -1.57
SOX6-208ENST00000527619 Q6ZRP5 223 aa5.26□□□□□ -1.57
SOX6-208ENST00000527619 PCNX1Q96RV3 2341 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 K7EQG2 157 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 SYCNQ0VAF6 134 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 NKAPP1Q8N9T2 125 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 DIRC1Q969H9 104 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 LINC00167Q96N53 147 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 CCL18P55774 89 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 COX7B2Q8TF08 81 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 FLNCQ14315 2725 aa5.25□□□□□ -1.57
SOX6-208ENST00000527619 J3QKU1 62 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 GNLYP22749 145 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 LINC00158P58513 81 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 ATP11AUNQ6ZP68 121 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 HIVEP3Q5T1R4 2406 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 PLA2G2AP14555 144 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 UBE2AP49459 152 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 C11orf71Q6IPW1 123 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 C11orf72Q8NBR9 251 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 LRBAP50851 2863 aa5.24□□□□□ -1.57
SOX6-208ENST00000527619 A6NN06 94 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 LY6G6DO95868 133 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 SVEP1Q4LDE5 3571 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 TRAV22A0A0B4J277 110 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 SPTBN1Q01082 2364 aaKnown RBP5.23□□□□□ -1.57
SOX6-208ENST00000527619 GCN1Q92616 2671 aaKnown RBP5.23□□□□□ -1.57
SOX6-208ENST00000527619 RELNP78509 3460 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 ZFHX3Q15911 3703 aa5.23□□□□□ -1.57
SOX6-208ENST00000527619 SPTAN1Q13813 2472 aaKnown RBP5.23□□□□□ -1.57
SOX6-208ENST00000527619 IGLV1-40P01703 118 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 DOPEY2Q9Y3R5 2298 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 LRRK2Q5S007 2527 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 TRBV6-4A0A1B0GX49 114 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 PRM2P04554 102 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 FAM30AQ9NZY2 134 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 TOMM7Q9P0U1 55 aa5.22□□□□□ -1.57
SOX6-208ENST00000527619 TRAV10A0A0B4J240 114 aa5.21□□□□□ -1.57
SOX6-208ENST00000527619 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.57
SOX6-208ENST00000527619 A8MU10 97 aa5.21□□□□□ -1.57
SOX6-208ENST00000527619 Q6ZTC4 211 aa5.21□□□□□ -1.57
SOX6-208ENST00000527619 Q8N814 137 aa5.21□□□□□ -1.57
SOX6-208ENST00000527619 UBR5O95071 2799 aaPredicted RBP5.21□□□□□ -1.58
SOX6-208ENST00000527619 USP9XQ93008 2570 aaPredicted RBP5.21□□□□□ -1.58
SOX6-208ENST00000527619 hDV103S1A0JD37 113 aa5.21□□□□□ -1.58
SOX6-208ENST00000527619 COL12A1Q99715 3063 aa5.21□□□□□ -1.58
SOX6-208ENST00000527619 TENM4Q6N022 2769 aa5.21□□□□□ -1.58
SOX6-208ENST00000527619 C16orf90A8MZG2 172 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 K7EQD1 137 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 LINC00313P59037 77 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 LY6EQ16553 131 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 Q75L30 129 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 TMEM254Q8TBM7 123 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 LINC01547P58512 204 aaPredicted RBP5.2□□□□□ -1.58
SOX6-208ENST00000527619 NTM-AS1Q6ZSK4 140 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 Q6ZTI0 123 aa5.2□□□□□ -1.58
SOX6-208ENST00000527619 LRCOL1A6NCL2 159 aa5.19□□□□□ -1.58
SOX6-208ENST00000527619 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
SOX6-208ENST00000527619 MP68P56378 58 aa5.19□□□□□ -1.58
SOX6-208ENST00000527619 CXCL6P80162 114 aa5.19□□□□□ -1.58
SOX6-208ENST00000527619 FBXL19-AS1Q494R0 122 aa5.19□□□□□ -1.58
SOX6-208ENST00000527619 Q6ZQT0 140 aa5.19□□□□□ -1.58
SOX6-208ENST00000527619 LOC110117498A0A087WWA1 95 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 A8MTW9 85 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 LMO4P61968 165 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 HAMPP81172 84 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 ESM1Q9NQ30 184 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 DOPEY1Q5JWR5 2465 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 A6NDX4 124 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 HCG22E2RYF7 251 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 BRD3OSQ6XYD6 125 aa5.18□□□□□ -1.58
SOX6-208ENST00000527619 USP9YO00507 2555 aaPredicted RBP5.17□□□□□ -1.58
SOX6-208ENST00000527619 TRBV10-1A0A0K0K1A3 114 aa5.17□□□□□ -1.58
SOX6-208ENST00000527619 RNASE1P07998 156 aaKnown RBP5.17□□□□□ -1.58
SOX6-208ENST00000527619 C19orf73Q9NVV2 129 aa5.17□□□□□ -1.58
SOX6-208ENST00000527619 A0A096LNT2 108 aa5.17□□□□□ -1.58
SOX6-208ENST00000527619 H3BUX3 64 aa5.17□□□□□ -1.58
SOX6-208ENST00000527619 DEFB131AP59861 70 aa5.17□□□□□ -1.58
SOX6-208ENST00000527619 UTP20O75691 2785 aaKnown RBP5.17□□□□□ -1.58
SOX6-208ENST00000527619 ANKHD1Q8IWZ3 2542 aaKnown RBP5.16□□□□□ -1.58
SOX6-208ENST00000527619 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
SOX6-208ENST00000527619 BAHCC1Q9P281 2608 aa5.16□□□□□ -1.58
SOX6-208ENST00000527619 Q5VV11 94 aa5.16□□□□□ -1.58
SOX6-208ENST00000527619 Q8N3U1 123 aa5.16□□□□□ -1.58
SOX6-208ENST00000527619 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.58
SOX6-208ENST00000527619 HRNRQ86YZ3 2850 aaPredicted RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms