RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 FA2HQ7L5A8 372 aa9.93□□□□□ -0.82
CTSB-213ENST00000527215 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
CTSB-213ENST00000527215 Q8IZM0 81 aa9.93□□□□□ -0.82
CTSB-213ENST00000527215 SMCO4Q9NRQ5 59 aa9.93□□□□□ -0.82
CTSB-213ENST00000527215 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
CTSB-213ENST00000527215 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
CTSB-213ENST00000527215 APOC3P02656 99 aa9.92□□□□□ -0.82
CTSB-213ENST00000527215 CKS1BP61024 79 aa9.92□□□□□ -0.82
CTSB-213ENST00000527215 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
CTSB-213ENST00000527215 LINC00469Q8N7U9 141 aa9.91□□□□□ -0.82
CTSB-213ENST00000527215 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
CTSB-213ENST00000527215 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
CTSB-213ENST00000527215 KRTAP7-1Q8IUC3 87 aa9.9□□□□□ -0.82
CTSB-213ENST00000527215 TRAPPC1Q9Y5R8 145 aa9.9□□□□□ -0.82
CTSB-213ENST00000527215 TNXBP22105 4242 aa9.9□□□□□ -0.83
CTSB-213ENST00000527215 TINCRA0A1B0GVN0 87 aa9.89□□□□□ -0.83
CTSB-213ENST00000527215 SNAPINO95295 136 aa9.89□□□□□ -0.83
CTSB-213ENST00000527215 NDUFA5Q16718 116 aa9.89□□□□□ -0.83
CTSB-213ENST00000527215 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
CTSB-213ENST00000527215 C9orf129Q5T035 196 aaKnown RBP9.89□□□□□ -0.83
CTSB-213ENST00000527215 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
CTSB-213ENST00000527215 SMIM1B2RUZ4 78 aa9.88□□□□□ -0.83
CTSB-213ENST00000527215 PMVKQ15126 192 aa9.88□□□□□ -0.83
CTSB-213ENST00000527215 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
CTSB-213ENST00000527215 SVBPQ8N300 66 aa9.88□□□□□ -0.83
CTSB-213ENST00000527215 C18orf32Q8TCD1 76 aa9.88□□□□□ -0.83
CTSB-213ENST00000527215 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
CTSB-213ENST00000527215 F8VRH5 84 aa9.87□□□□□ -0.83
CTSB-213ENST00000527215 M0QXV9 152 aa9.87□□□□□ -0.83
CTSB-213ENST00000527215 URB1-AS1Q96HZ7 61 aa9.87□□□□□ -0.83
CTSB-213ENST00000527215 A0A096LNJ9 63 aa9.86□□□□□ -0.83
CTSB-213ENST00000527215 PDZD11Q5EBL8 140 aa9.86□□□□□ -0.83
CTSB-213ENST00000527215 LINC00614P0C842 121 aa9.85□□□□□ -0.83
CTSB-213ENST00000527215 CXCL5P42830 114 aa9.85□□□□□ -0.83
CTSB-213ENST00000527215 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
CTSB-213ENST00000527215 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
CTSB-213ENST00000527215 SPINK8P0C7L1 97 aa9.84□□□□□ -0.83
CTSB-213ENST00000527215 UBE2BP63146 152 aa9.84□□□□□ -0.83
CTSB-213ENST00000527215 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
CTSB-213ENST00000527215 HBDP02042 147 aa9.83□□□□□ -0.84
CTSB-213ENST00000527215 PMCHL1Q16048 86 aa9.83□□□□□ -0.84
CTSB-213ENST00000527215 NDUFA6P56556 154 aa9.82□□□□□ -0.84
CTSB-213ENST00000527215 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
CTSB-213ENST00000527215 ODF1Q14990 250 aa9.82□□□□□ -0.84
CTSB-213ENST00000527215 IGLC3P0DOY3 106 aa9.81□□□□□ -0.84
CTSB-213ENST00000527215 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
CTSB-213ENST00000527215 H3BRM9 83 aa9.8□□□□□ -0.84
CTSB-213ENST00000527215 RAB5BP61020 215 aa9.8□□□□□ -0.84
CTSB-213ENST00000527215 DIRC1Q969H9 104 aa9.79□□□□□ -0.84
CTSB-213ENST00000527215 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
CTSB-213ENST00000527215 ZNF22P17026 224 aaPredicted RBP9.78□□□□□ -0.84
CTSB-213ENST00000527215 H0Y9J4 135 aa9.77□□□□□ -0.85
CTSB-213ENST00000527215 ATP5LO75964 103 aa9.77□□□□□ -0.85
CTSB-213ENST00000527215 IGLV5-39A0A0G2JS06 123 aa9.76□□□□□ -0.85
CTSB-213ENST00000527215 LBHQ53QV2 105 aaPredicted RBP9.75□□□□□ -0.85
CTSB-213ENST00000527215 BAGE3Q86Y29 109 aa9.75□□□□□ -0.85
CTSB-213ENST00000527215 CBLN2Q8IUK8 224 aa9.75□□□□□ -0.85
CTSB-213ENST00000527215 TP73-AS1Q9UF72 201 aa9.75□□□□□ -0.85
CTSB-213ENST00000527215 C11orf86A6NJI1 115 aa9.74□□□□□ -0.85
CTSB-213ENST00000527215 MRPL55Q7Z7F7 128 aaKnown RBP9.74□□□□□ -0.85
CTSB-213ENST00000527215 CHCHD1Q96BP2 118 aaKnown RBP9.73□□□□□ -0.85
CTSB-213ENST00000527215 NUPR1O60356 82 aa9.72□□□□□ -0.85
CTSB-213ENST00000527215 TMEM170BQ5T4T1 132 aa9.72□□□□□ -0.85
CTSB-213ENST00000527215 PFN2P35080 140 aa9.71□□□□□ -0.86
CTSB-213ENST00000527215 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.86
CTSB-213ENST00000527215 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.86
CTSB-213ENST00000527215 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
CTSB-213ENST00000527215 IFI27L1Q96BM0 104 aa9.7□□□□□ -0.86
CTSB-213ENST00000527215 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
CTSB-213ENST00000527215 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
CTSB-213ENST00000527215 RPL37AP8A6NKH3 93 aa9.69□□□□□ -0.86
CTSB-213ENST00000527215 ZNF861PO60384 105 aa9.69□□□□□ -0.86
CTSB-213ENST00000527215 SLC7A5P1Q8MH63 180 aa9.69□□□□□ -0.86
CTSB-213ENST00000527215 ERG28Q9UKR5 140 aa9.69□□□□□ -0.86
CTSB-213ENST00000527215 LRP2P98164 4655 aa9.68□□□□□ -0.86
CTSB-213ENST00000527215 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
CTSB-213ENST00000527215 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
CTSB-213ENST00000527215 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
CTSB-213ENST00000527215 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
CTSB-213ENST00000527215 HSBP1O75506 76 aa9.67□□□□□ -0.86
CTSB-213ENST00000527215 TRGC2P03986 189 aa9.67□□□□□ -0.86
CTSB-213ENST00000527215 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
CTSB-213ENST00000527215 IGLV1-50A0A075B6I6 118 aa9.66□□□□□ -0.86
CTSB-213ENST00000527215 BCE1O60756 84 aa9.66□□□□□ -0.86
CTSB-213ENST00000527215 SND1-IT1Q9HBX3 110 aa9.66□□□□□ -0.86
CTSB-213ENST00000527215 TMEM223A0PJW6 202 aa9.65□□□□□ -0.86
CTSB-213ENST00000527215 SCO1O75880 301 aa9.65□□□□□ -0.86
CTSB-213ENST00000527215 COX17Q14061 63 aa9.65□□□□□ -0.86
CTSB-213ENST00000527215 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
CTSB-213ENST00000527215 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
CTSB-213ENST00000527215 VPREB1P12018 145 aa9.63□□□□□ -0.87
CTSB-213ENST00000527215 IGKV2-28A0A075B6P5 120 aa9.62□□□□□ -0.87
CTSB-213ENST00000527215 IGKV2D-28P01615 120 aa9.62□□□□□ -0.87
CTSB-213ENST00000527215 LINC00310P59036 64 aa9.62□□□□□ -0.87
CTSB-213ENST00000527215 H0Y8G0 127 aa9.61□□□□□ -0.87
CTSB-213ENST00000527215 SERF1AO75920 110 aa9.61□□□□□ -0.87
CTSB-213ENST00000527215 RPL13AP40429 203 aaKnown RBP9.6□□□□□ -0.87
CTSB-213ENST00000527215 LINC00158P58513 81 aa9.6□□□□□ -0.87
CTSB-213ENST00000527215 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
CTSB-213ENST00000527215 Q8NDZ9 215 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms