RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 S100A8P05109 93 aa9.18□□□□□ -0.94
CHMP4A-203ENST00000527154 F8W036 122 aa9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 MT1HP80294 61 aa9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 IFITM2Q01629 132 aa9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 MRPL54Q6P161 138 aaKnown RBP9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
CHMP4A-203ENST00000527154 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
CHMP4A-203ENST00000527154 KRTAP9-7A8MTY7 169 aa9.16□□□□□ -0.94
CHMP4A-203ENST00000527154 RAB5AP20339 215 aa9.16□□□□□ -0.94
CHMP4A-203ENST00000527154 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
CHMP4A-203ENST00000527154 LINC00469Q8N7U9 141 aa9.16□□□□□ -0.94
CHMP4A-203ENST00000527154 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
CHMP4A-203ENST00000527154 PPBPP02775 128 aa9.15□□□□□ -0.94
CHMP4A-203ENST00000527154 MT-ND4LP03901 98 aa9.15□□□□□ -0.94
CHMP4A-203ENST00000527154 CFC1BP0CG36 223 aa9.15□□□□□ -0.94
CHMP4A-203ENST00000527154 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
CHMP4A-203ENST00000527154 IGLV4-3A0A075B6K6 122 aa9.14□□□□□ -0.95
CHMP4A-203ENST00000527154 ATP5L2Q7Z4Y8 100 aa9.14□□□□□ -0.95
CHMP4A-203ENST00000527154 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
CHMP4A-203ENST00000527154 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
CHMP4A-203ENST00000527154 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
CHMP4A-203ENST00000527154 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
CHMP4A-203ENST00000527154 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
CHMP4A-203ENST00000527154 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
CHMP4A-203ENST00000527154 IGLV5-37A0A075B6J1 123 aa9.12□□□□□ -0.95
CHMP4A-203ENST00000527154 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
CHMP4A-203ENST00000527154 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
CHMP4A-203ENST00000527154 Q8IZM0 81 aa9.12□□□□□ -0.95
CHMP4A-203ENST00000527154 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
CHMP4A-203ENST00000527154 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
CHMP4A-203ENST00000527154 PRELID3AQ96N28 172 aa9.11□□□□□ -0.95
CHMP4A-203ENST00000527154 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
CHMP4A-203ENST00000527154 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.1□□□□□ -0.95
CHMP4A-203ENST00000527154 PRSS2P07478 247 aa9.1□□□□□ -0.95
CHMP4A-203ENST00000527154 C3orf22Q8N5N4 141 aa9.1□□□□□ -0.95
CHMP4A-203ENST00000527154 SEC11CQ9BY50 192 aa9.1□□□□□ -0.95
CHMP4A-203ENST00000527154 TOMM7Q9P0U1 55 aa9.1□□□□□ -0.95
CHMP4A-203ENST00000527154 UBE2AP49459 152 aa9.09□□□□□ -0.95
CHMP4A-203ENST00000527154 CKS1BP61024 79 aa9.09□□□□□ -0.95
CHMP4A-203ENST00000527154 COMMD7Q86VX2 200 aa9.09□□□□□ -0.95
CHMP4A-203ENST00000527154 LOC389332A0A1B0GUA5 103 aa9.08□□□□□ -0.96
CHMP4A-203ENST00000527154 KRTAP10-6P60371 365 aaPredicted RBP9.08□□□□□ -0.96
CHMP4A-203ENST00000527154 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
CHMP4A-203ENST00000527154 Q6ZN92 141 aa9.08□□□□□ -0.96
CHMP4A-203ENST00000527154 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
CHMP4A-203ENST00000527154 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
CHMP4A-203ENST00000527154 XP32Q5T750 250 aa9.07□□□□□ -0.96
CHMP4A-203ENST00000527154 PLEKHB2Q96CS7 222 aa9.07□□□□□ -0.96
CHMP4A-203ENST00000527154 VCX2Q9H322 139 aa9.07□□□□□ -0.96
CHMP4A-203ENST00000527154 CYSLTR1Q9Y271 337 aa9.07□□□□□ -0.96
CHMP4A-203ENST00000527154 TRAV9-1A0A075B6T8 112 aa9.06□□□□□ -0.96
CHMP4A-203ENST00000527154 F8VRH5 84 aa9.06□□□□□ -0.96
CHMP4A-203ENST00000527154 ADCYAP1P18509 176 aa9.06□□□□□ -0.96
CHMP4A-203ENST00000527154 C2orf66Q6UXQ4 117 aa9.06□□□□□ -0.96
CHMP4A-203ENST00000527154 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-203ENST00000527154 MAP1LC3AQ9H492 121 aa9.06□□□□□ -0.96
CHMP4A-203ENST00000527154 PRSS47A8MTI9 375 aa9.05□□□□□ -0.96
CHMP4A-203ENST00000527154 AMELXQ99217 191 aa9.05□□□□□ -0.96
CHMP4A-203ENST00000527154 GAGE10A6NGK3 116 aa9.04□□□□□ -0.96
CHMP4A-203ENST00000527154 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
CHMP4A-203ENST00000527154 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
CHMP4A-203ENST00000527154 RHEBQ15382 184 aa9.03□□□□□ -0.96
CHMP4A-203ENST00000527154 Q8N8P6 123 aa9.03□□□□□ -0.96
CHMP4A-203ENST00000527154 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.97
CHMP4A-203ENST00000527154 S100PP25815 95 aa9.02□□□□□ -0.97
CHMP4A-203ENST00000527154 PRLHP81277 87 aa9.02□□□□□ -0.97
CHMP4A-203ENST00000527154 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
CHMP4A-203ENST00000527154 IGIPA6NJ69 53 aa9.01□□□□□ -0.97
CHMP4A-203ENST00000527154 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
CHMP4A-203ENST00000527154 NPSP0C0P6 89 aa9.01□□□□□ -0.97
CHMP4A-203ENST00000527154 CXCL5P42830 114 aa9.01□□□□□ -0.97
CHMP4A-203ENST00000527154 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
CHMP4A-203ENST00000527154 HERVK_113P63121 156 aa9□□□□□ -0.97
CHMP4A-203ENST00000527154 SEC11AP67812 179 aa9□□□□□ -0.97
CHMP4A-203ENST00000527154 NDUFA5Q16718 116 aa9□□□□□ -0.97
CHMP4A-203ENST00000527154 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
CHMP4A-203ENST00000527154 COX19Q49B96 90 aa8.99□□□□□ -0.97
CHMP4A-203ENST00000527154 GNB1LQ9BYB4 327 aa8.99□□□□□ -0.97
CHMP4A-203ENST00000527154 K7EMI3 77 aa8.98□□□□□ -0.97
CHMP4A-203ENST00000527154 SPINK1P00995 79 aa8.98□□□□□ -0.97
CHMP4A-203ENST00000527154 PAPPA-AS1Q5QFB9 102 aa8.98□□□□□ -0.97
CHMP4A-203ENST00000527154 TMEM126AQ9H061 195 aa8.98□□□□□ -0.97
CHMP4A-203ENST00000527154 IGKV2-28A0A075B6P5 120 aa8.97□□□□□ -0.97
CHMP4A-203ENST00000527154 IGKV2D-28P01615 120 aa8.97□□□□□ -0.97
CHMP4A-203ENST00000527154 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
CHMP4A-203ENST00000527154 M0R378 163 aa8.96□□□□□ -0.98
CHMP4A-203ENST00000527154 SVBPQ8N300 66 aa8.96□□□□□ -0.98
CHMP4A-203ENST00000527154 DAND5Q8N907 189 aa8.96□□□□□ -0.98
CHMP4A-203ENST00000527154 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.98
CHMP4A-203ENST00000527154 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
CHMP4A-203ENST00000527154 SSPOA2VEC9 5147 aa8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 SCO1O75880 301 aa8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 SNAPINO95295 136 aa8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 G0S2P27469 103 aa8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 RPS29P62273 56 aaKnown RBP8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 FAM19A1Q7Z5A9 133 aa8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 TIMM17AQ99595 171 aa8.95□□□□□ -0.98
CHMP4A-203ENST00000527154 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms