RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 SPAG11BQ08648 103 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 MOBPQ13875 183 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 Q5VV11 94 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 SPAG11AQ6PDA7 123 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 Q6ZR03 302 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 ADM2Q7Z4H4 148 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 CIRBP-AS1Q8TBR5 109 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 KLF14Q8TD94 323 aaPredicted RBP2.02□□□□□ -2.09
COPB1-205ENST00000526527 C4orf3Q8WVX3 66 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 LINC00167Q96N53 147 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 CDC42SE2Q9NRR3 84 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 R4GMQ9 66 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 SPTA1P02549 2419 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 DCHS1Q96JQ0 3298 aa2.02□□□□□ -2.09
COPB1-205ENST00000526527 PTPRBP23467 1997 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 IGKV1D-42A0A075B6H8 117 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 IGHV3-64DA0A0J9YX35 117 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 C17orf98A8MV24 154 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 B4DSR2 109 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 HMGN4O00479 90 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 PSCAO43653 123 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 WISP3O95389 354 aaPredicted RBP2.01□□□□□ -2.09
COPB1-205ENST00000526527 Q86TA4 180 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 AMELXQ99217 191 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 PRR15LQ9BU68 103 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 S4R3C0 116 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 V9GYV3 84 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 LAMA1P25391 3075 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 ARID1AO14497 2285 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 URB1O60287 2271 aaKnown RBP2.01□□□□□ -2.09
COPB1-205ENST00000526527 KNTC1P50748 2209 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 UNC13CQ8NB66 2214 aa2.01□□□□□ -2.09
COPB1-205ENST00000526527 SPEGQ15772 3267 aa2□□□□□ -2.09
COPB1-205ENST00000526527 SDK2Q58EX2 2172 aa2□□□□□ -2.09
COPB1-205ENST00000526527 TLN1Q9Y490 2541 aaKnown RBP2□□□□□ -2.09
COPB1-205ENST00000526527 FAM208BQ5VWN6 2430 aa2□□□□□ -2.09
COPB1-205ENST00000526527 IGKV3D-7A0A0C4DH55 119 aa2□□□□□ -2.09
COPB1-205ENST00000526527 H0YGG7 62 aa2□□□□□ -2.09
COPB1-205ENST00000526527 IGHV3-33P01772 117 aa2□□□□□ -2.09
COPB1-205ENST00000526527 TFF1P04155 84 aa2□□□□□ -2.09
COPB1-205ENST00000526527 TLX1NBP0CAT3 122 aa2□□□□□ -2.09
COPB1-205ENST00000526527 DEFB109BQ30KR1 87 aa2□□□□□ -2.09
COPB1-205ENST00000526527 FAM229BQ4G0N7 80 aa2□□□□□ -2.09
COPB1-205ENST00000526527 DEFB134Q4QY38 66 aa2□□□□□ -2.09
COPB1-205ENST00000526527 NTM-AS1Q6ZSK4 140 aa2□□□□□ -2.09
COPB1-205ENST00000526527 LYPD6Q86Y78 171 aa2□□□□□ -2.09
COPB1-205ENST00000526527 LYPD1Q8N2G4 141 aa2□□□□□ -2.09
COPB1-205ENST00000526527 DMAC1Q96GE9 116 aa2□□□□□ -2.09
COPB1-205ENST00000526527 PROK2Q9HC23 129 aa2□□□□□ -2.09
COPB1-205ENST00000526527 NDUFA4L2Q9NRX3 87 aa2□□□□□ -2.09
COPB1-205ENST00000526527 MRPL36Q9P0J6 103 aaKnown RBP2□□□□□ -2.09
COPB1-205ENST00000526527 TIMM8BQ9Y5J9 83 aaPredicted RBP2□□□□□ -2.09
COPB1-205ENST00000526527 SNURFQ9Y675 71 aa2□□□□□ -2.09
COPB1-205ENST00000526527 SPTBP11277 2137 aa2□□□□□ -2.09
COPB1-205ENST00000526527 CHD6Q8TD26 2715 aa2□□□□□ -2.09
COPB1-205ENST00000526527 DOCK11Q5JSL3 2073 aa2□□□□□ -2.09
COPB1-205ENST00000526527 PIKFYVEQ9Y2I7 2098 aa2□□□□□ -2.09
COPB1-205ENST00000526527 DSCAMO60469 2012 aa2□□□□□ -2.09
COPB1-205ENST00000526527 SCN3AQ9NY46 2000 aa2□□□□□ -2.09
COPB1-205ENST00000526527 ZNF462Q96JM2 2506 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 CELSR3Q9NYQ7 3312 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 JMJD7-PLA2G4BH0Y9G9 81 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 H3BQ85 93 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 LHBP01229 141 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 CLPSP04118 112 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 IGKV3-11P04433 115 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 S100A3P33764 101 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 GDF5OSQ5U4N7 250 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.99□□□□□ -2.09
COPB1-205ENST00000526527 ITPR1Q14643 2758 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 KMT2BQ9UMN6 2715 aaPredicted RBP1.99□□□□□ -2.09
COPB1-205ENST00000526527 IGSF10Q6WRI0 2623 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 NBASA2RRP1 2371 aa1.99□□□□□ -2.09
COPB1-205ENST00000526527 PIEZO2Q9H5I5 2752 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 IGKV1D-37A0A075B6S9 117 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 IGKV1OR2-108A0A075B7D4 117 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 TRAV12-1A0A0B4J245 112 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 A0A0J9YY99 117 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 F8VRH5 84 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 ZNF861PO60384 105 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 IGHV3-30P01768 117 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 IGHV3-30-5P0DP03 117 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 RPL38P63173 70 aaKnown RBP1.98□□□□□ -2.09
COPB1-205ENST00000526527 NREPQ16612 68 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 C1orf137Q5JT78 98 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 C15orf56Q8N910 161 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 C20orf166-AS1Q96NR2 134 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 TMEM167BQ9NRX6 74 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 MINOS1-NBL1R4GNA1 71 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 FREM2Q5SZK8 3169 aa1.98□□□□□ -2.09
COPB1-205ENST00000526527 DSPP15924 2871 aaKnown RBP1.98□□□□□ -2.09
COPB1-205ENST00000526527 CFAP46Q8IYW2 2715 aa1.97□□□□□ -2.09
COPB1-205ENST00000526527 FASNP49327 2511 aaKnown RBP1.97□□□□□ -2.09
COPB1-205ENST00000526527 COL6A6A6NMZ7 2263 aa1.97□□□□□ -2.09
COPB1-205ENST00000526527 BPTFQ12830 3046 aa1.97□□□□□ -2.09
COPB1-205ENST00000526527 NACAE9PAV3 2078 aa1.97□□□□□ -2.09
COPB1-205ENST00000526527 ZZEF1O43149 2961 aa1.97□□□□□ -2.09
COPB1-205ENST00000526527 IGHV3OR16-8A0A075B7F1 116 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms