RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FABP4P15090 132 aa6.96□□□□□ -1.3
NEDD8-204ENST00000526430 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
NEDD8-204ENST00000526430 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
NEDD8-204ENST00000526430 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
NEDD8-204ENST00000526430 ODF1Q14990 250 aa6.95□□□□□ -1.3
NEDD8-204ENST00000526430 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
NEDD8-204ENST00000526430 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
NEDD8-204ENST00000526430 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
NEDD8-204ENST00000526430 ZNF22P17026 224 aaPredicted RBP6.94□□□□□ -1.3
NEDD8-204ENST00000526430 HERVK_113P63121 156 aa6.94□□□□□ -1.3
NEDD8-204ENST00000526430 C14orf177Q52M58 125 aa6.94□□□□□ -1.3
NEDD8-204ENST00000526430 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
NEDD8-204ENST00000526430 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
NEDD8-204ENST00000526430 SEC11AP67812 179 aa6.93□□□□□ -1.3
NEDD8-204ENST00000526430 C10orf25Q5T742 122 aa6.93□□□□□ -1.3
NEDD8-204ENST00000526430 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
NEDD8-204ENST00000526430 PACRGQ96M98 296 aaPredicted RBP6.93□□□□□ -1.3
NEDD8-204ENST00000526430 MRPL35Q9NZE8 188 aaKnown RBP6.93□□□□□ -1.3
NEDD8-204ENST00000526430 CHTOPQ9Y3Y2 248 aaKnown RBP6.93□□□□□ -1.3
NEDD8-204ENST00000526430 PANO1I0J062 215 aa6.92□□□□□ -1.3
NEDD8-204ENST00000526430 OR10D4PQ8NGN7 298 aa6.92□□□□□ -1.3
NEDD8-204ENST00000526430 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
NEDD8-204ENST00000526430 C2orf48Q96LS8 159 aa6.92□□□□□ -1.3
NEDD8-204ENST00000526430 MUC2Q02817 5179 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 IGLV5-39A0A0G2JS06 123 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 F8VRH5 84 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 MALP21145 153 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 GEMIN7Q9H840 131 aaKnown RBP6.91□□□□□ -1.3
NEDD8-204ENST00000526430 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
NEDD8-204ENST00000526430 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 APOMO95445 188 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
NEDD8-204ENST00000526430 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 LINC00469Q8N7U9 141 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.3
NEDD8-204ENST00000526430 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 ZNF561-AS1K7EIQ3 104 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 Q8IZM0 81 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 HIST1H2BLQ99880 126 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 LPAP08519 4548 aa6.89□□□□□ -1.31
NEDD8-204ENST00000526430 A0A0U1RQV1 116 aa6.88□□□□□ -1.31
NEDD8-204ENST00000526430 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
NEDD8-204ENST00000526430 MAP1LC3CQ9BXW4 147 aa6.88□□□□□ -1.31
NEDD8-204ENST00000526430 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
NEDD8-204ENST00000526430 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-204ENST00000526430 H0Y8G0 127 aa6.87□□□□□ -1.31
NEDD8-204ENST00000526430 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
NEDD8-204ENST00000526430 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
NEDD8-204ENST00000526430 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
NEDD8-204ENST00000526430 CAMK2N2Q96S95 79 aa6.87□□□□□ -1.31
NEDD8-204ENST00000526430 F8WDY8 70 aa6.86□□□□□ -1.31
NEDD8-204ENST00000526430 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-204ENST00000526430 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
NEDD8-204ENST00000526430 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
NEDD8-204ENST00000526430 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
NEDD8-204ENST00000526430 CARD19Q96LW7 228 aa6.86□□□□□ -1.31
NEDD8-204ENST00000526430 CHTF8P0CG12 524 aa6.85□□□□□ -1.31
NEDD8-204ENST00000526430 TOMM7Q9P0U1 55 aa6.85□□□□□ -1.31
NEDD8-204ENST00000526430 A0A096LNI7 61 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
NEDD8-204ENST00000526430 H3BRM9 83 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 NDUFA1O15239 70 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 DPM2O94777 84 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 IGKCP01834 107 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 KRTDAPP60985 99 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 C6orf226Q5I0X4 101 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 KRTAP7-1Q8IUC3 87 aa6.84□□□□□ -1.31
NEDD8-204ENST00000526430 S100A6P06703 90 aa6.83□□□□□ -1.32
NEDD8-204ENST00000526430 TLX1NBP0CAT3 122 aa6.83□□□□□ -1.32
NEDD8-204ENST00000526430 TSPEAR-AS2P59090 65 aa6.83□□□□□ -1.32
NEDD8-204ENST00000526430 ZNF625Q96I27 306 aaPredicted RBP6.83□□□□□ -1.32
NEDD8-204ENST00000526430 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
NEDD8-204ENST00000526430 PLNP26678 52 aa6.82□□□□□ -1.32
NEDD8-204ENST00000526430 Q6ZRP5 223 aa6.82□□□□□ -1.32
NEDD8-204ENST00000526430 SPACA4Q8TDM5 124 aa6.82□□□□□ -1.32
NEDD8-204ENST00000526430 PRSS2P07478 247 aa6.81□□□□□ -1.32
NEDD8-204ENST00000526430 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-204ENST00000526430 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
NEDD8-204ENST00000526430 STPG4Q8N801 248 aa6.81□□□□□ -1.32
NEDD8-204ENST00000526430 A0A087WYN8 130 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 LEPROTO15243 131 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 S100A2P29034 98 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 CXCL5P42830 114 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 CKS1BP61024 79 aa6.8□□□□□ -1.32
NEDD8-204ENST00000526430 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
NEDD8-204ENST00000526430 E9PLD3 99 aa6.79□□□□□ -1.32
NEDD8-204ENST00000526430 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
NEDD8-204ENST00000526430 GAGE2BQ13066 116 aa6.79□□□□□ -1.32
NEDD8-204ENST00000526430 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms