RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 A8MTW9 85 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 SPATA3Q8NHX4 192 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 ZNF580Q9UK33 172 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 ALPK3Q96L96 1907 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 AVPP01185 164 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 Q6ZSN1 163 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 COX8CQ7Z4L0 72 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 PLCE1Q9P212 2302 aa6.63□□□□□ -1.35
CTNND1-213ENST00000526357 CACNA1GO43497 2377 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 MOBPQ13875 183 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 SMR3AQ99954 134 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 PCNX2A6NKB5 2137 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 NOTCH3Q9UM47 2321 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 TNCP24821 2201 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 LINC00310P59036 64 aa6.62□□□□□ -1.35
CTNND1-213ENST00000526357 LINC00313P59037 77 aa6.61□□□□□ -1.35
CTNND1-213ENST00000526357 GVINP1Q7Z2Y8 2422 aa6.6□□□□□ -1.35
CTNND1-213ENST00000526357 NUP210LQ5VU65 1888 aa6.6□□□□□ -1.35
CTNND1-213ENST00000526357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.6□□□□□ -1.359e-7■■■□□ 18
CTNND1-213ENST00000526357 C11orf72Q8NBR9 251 aa6.59□□□□□ -1.35
CTNND1-213ENST00000526357 NOTCH4Q99466 2003 aa6.59□□□□□ -1.35
CTNND1-213ENST00000526357 FHL3Q13643 280 aa6.59□□□□□ -1.35
CTNND1-213ENST00000526357 KIAA1549Q9HCM3 1950 aa6.59□□□□□ -1.35
CTNND1-213ENST00000526357 Q8NBF4 154 aa6.59□□□□□ -1.35
CTNND1-213ENST00000526357 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.36
CTNND1-213ENST00000526357 FAM229AH3BQW9 127 aa6.59□□□□□ -1.36
CTNND1-213ENST00000526357 COL4A4P53420 1690 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-213ENST00000526357 LINC00167Q96N53 147 aa6.58□□□□□ -1.36
CTNND1-213ENST00000526357 KIAA1549LQ6ZVL6 1849 aa6.58□□□□□ -1.36
CTNND1-213ENST00000526357 MDFIQ99750 246 aa6.57□□□□□ -1.36
CTNND1-213ENST00000526357 KIF25-AS1Q9Y6Z4 181 aa6.57□□□□□ -1.36
CTNND1-213ENST00000526357 SHANK1Q9Y566 2161 aa6.57□□□□□ -1.36
CTNND1-213ENST00000526357 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
CTNND1-213ENST00000526357 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
CTNND1-213ENST00000526357 A0A096LNJ9 63 aa6.56□□□□□ -1.36
CTNND1-213ENST00000526357 ELOF1P60002 83 aaKnown RBP6.56□□□□□ -1.36
CTNND1-213ENST00000526357 RPS28P62857 69 aaKnown RBP6.56□□□□□ -1.36
CTNND1-213ENST00000526357 TYMSOSQ8TAI1 123 aa6.55□□□□□ -1.36
CTNND1-213ENST00000526357 HIVEP2P31629 2446 aa6.55□□□□□ -1.36
CTNND1-213ENST00000526357 SSBP3-AS1Q7Z2R9 100 aa6.54□□□□□ -1.36
CTNND1-213ENST00000526357 C4orf26Q17RF5 130 aa6.54□□□□□ -1.36
CTNND1-213ENST00000526357 IGLV8-61A0A075B6I0 122 aa6.54□□□□□ -1.36
CTNND1-213ENST00000526357 LOC110117498A0A087WWA1 95 aa6.54□□□□□ -1.36
CTNND1-213ENST00000526357 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
CTNND1-213ENST00000526357 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 KRTAP10-9P60411 292 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 Q6ZRP5 223 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 LINC00476Q8WZB0 136 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 C2orf16Q68DN1 1984 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 Q96NJ1 140 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 CDSNQ15517 529 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 Q6ZQT0 140 aa6.53□□□□□ -1.36
CTNND1-213ENST00000526357 DSCAMO60469 2012 aa6.52□□□□□ -1.37
CTNND1-213ENST00000526357 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
CTNND1-213ENST00000526357 Q6ZRX8 168 aa6.51□□□□□ -1.37
CTNND1-213ENST00000526357 H3BNG1 76 aa6.51□□□□□ -1.37
CTNND1-213ENST00000526357 IGHV3OR16-9A0A0B4J2B5 98 aa6.51□□□□□ -1.37
CTNND1-213ENST00000526357 RTL8CO15255 209 aa6.51□□□□□ -1.37
CTNND1-213ENST00000526357 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
CTNND1-213ENST00000526357 MED12LQ86YW9 2145 aa6.5□□□□□ -1.37
CTNND1-213ENST00000526357 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
CTNND1-213ENST00000526357 PCNX1Q96RV3 2341 aa6.49□□□□□ -1.37
CTNND1-213ENST00000526357 CREBBPQ92793 2442 aa6.49□□□□□ -1.37
CTNND1-213ENST00000526357 C16orf90A8MZG2 172 aa6.48□□□□□ -1.37
CTNND1-213ENST00000526357 CYP4F30PQ9H0H9 118 aa6.48□□□□□ -1.37
CTNND1-213ENST00000526357 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
CTNND1-213ENST00000526357 CACNA1HO95180 2353 aa6.48□□□□□ -1.37
CTNND1-213ENST00000526357 APLNQ9ULZ1 77 aa6.48□□□□□ -1.37
CTNND1-213ENST00000526357 RPL37AP61513 92 aaKnown RBP6.47□□□□□ -1.37
CTNND1-213ENST00000526357 UQCR11O14957 56 aa6.47□□□□□ -1.37
CTNND1-213ENST00000526357 ATG2AQ2TAZ0 1938 aa6.46□□□□□ -1.37
CTNND1-213ENST00000526357 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.37
CTNND1-213ENST00000526357 A8MWP4 228 aa6.46□□□□□ -1.37
CTNND1-213ENST00000526357 CHTF8P0CG12 524 aa6.46□□□□□ -1.37
CTNND1-213ENST00000526357 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.37
CTNND1-213ENST00000526357 GPR179Q6PRD1 2367 aa6.46□□□□□ -1.37
CTNND1-213ENST00000526357 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
CTNND1-213ENST00000526357 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.38
CTNND1-213ENST00000526357 PRR14LQ5THK1 2151 aa6.46□□□□□ -1.38
CTNND1-213ENST00000526357 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
CTNND1-213ENST00000526357 COA5Q86WW8 74 aa6.46□□□□□ -1.38
CTNND1-213ENST00000526357 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
CTNND1-213ENST00000526357 TM2D3Q9BRN9 247 aa6.46□□□□□ -1.38
CTNND1-213ENST00000526357 J3QL48 77 aa6.45□□□□□ -1.38
CTNND1-213ENST00000526357 LINC00315P59091 139 aa6.45□□□□□ -1.38
CTNND1-213ENST00000526357 ST20-AS1Q8NBB2 130 aa6.45□□□□□ -1.38
CTNND1-213ENST00000526357 PRRC2AP48634 2157 aaKnown RBP6.44□□□□□ -1.38
CTNND1-213ENST00000526357 MUC22E2RYF6 1773 aaPredicted RBP6.44□□□□□ -1.38
CTNND1-213ENST00000526357 NBDYA0A0U1RRE5 68 aa6.44□□□□□ -1.38
CTNND1-213ENST00000526357 ERC2-IT1O76042 136 aa6.44□□□□□ -1.38
CTNND1-213ENST00000526357 RIF1Q5UIP0 2472 aaKnown RBP6.44□□□□□ -1.38
CTNND1-213ENST00000526357 EML5Q05BV3 1969 aa6.43□□□□□ -1.38
CTNND1-213ENST00000526357 FAM19A4Q96LR4 140 aa6.43□□□□□ -1.38
CTNND1-213ENST00000526357 PCNX3Q9H6A9 2034 aa6.43□□□□□ -1.38
CTNND1-213ENST00000526357 SMCPP49901 116 aaPredicted RBP6.43□□□□□ -1.38
CTNND1-213ENST00000526357 PRO3102Q9H379 93 aa6.43□□□□□ -1.38
CTNND1-213ENST00000526357 FREM1Q5H8C1 2179 aa6.42□□□□□ -1.38
CTNND1-213ENST00000526357 HCFC1P51610 2035 aa6.42□□□□□ -1.38
CTNND1-213ENST00000526357 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms