RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 C18orf32Q8TCD1 76 aa10.52□□□□□ -0.73
CCS-203ENST00000526058 URB1-AS1Q96HZ7 61 aa10.52□□□□□ -0.73
CCS-203ENST00000526058 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
CCS-203ENST00000526058 CST9LQ9H4G1 147 aa10.52□□□□□ -0.73
CCS-203ENST00000526058 LINC01549A6NIU2 74 aa10.51□□□□□ -0.73
CCS-203ENST00000526058 CKS1BP61024 79 aa10.51□□□□□ -0.73
CCS-203ENST00000526058 C6orf226Q5I0X4 101 aa10.51□□□□□ -0.73
CCS-203ENST00000526058 Q8IZM0 81 aa10.51□□□□□ -0.73
CCS-203ENST00000526058 A0A096LNJ9 63 aa10.5□□□□□ -0.73
CCS-203ENST00000526058 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
CCS-203ENST00000526058 NDUFC2-KCTD14E9PQ53 114 aa10.5□□□□□ -0.73
CCS-203ENST00000526058 LINC00469Q8N7U9 141 aa10.5□□□□□ -0.73
CCS-203ENST00000526058 HMCN2Q8NDA2 5059 aa10.5□□□□□ -0.73
CCS-203ENST00000526058 SRSF9Q13242 221 aaKnown RBP eCLIP10.49□□□□□ -0.73
CCS-203ENST00000526058 PMVKQ15126 192 aa10.49□□□□□ -0.73
CCS-203ENST00000526058 FAM19A5Q7Z5A7 132 aaPredicted RBP10.49□□□□□ -0.73
CCS-203ENST00000526058 KRTAP7-1Q8IUC3 87 aa10.49□□□□□ -0.73
CCS-203ENST00000526058 PSORS1C2Q9UIG4 136 aa10.49□□□□□ -0.73
CCS-203ENST00000526058 LINC00614P0C842 121 aa10.48□□□□□ -0.73
CCS-203ENST00000526058 C9orf129Q5T035 196 aaKnown RBP10.48□□□□□ -0.73
CCS-203ENST00000526058 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
CCS-203ENST00000526058 UBR4Q5T4S7 5183 aa10.48□□□□□ -0.73
CCS-203ENST00000526058 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
CCS-203ENST00000526058 SMIM1B2RUZ4 78 aa10.47□□□□□ -0.73
CCS-203ENST00000526058 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
CCS-203ENST00000526058 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
CCS-203ENST00000526058 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
CCS-203ENST00000526058 SERTAD4-AS1Q5TG53 156 aa10.46□□□□□ -0.73
CCS-203ENST00000526058 SPINK8P0C7L1 97 aa10.45□□□□□ -0.74
CCS-203ENST00000526058 PDZD11Q5EBL8 140 aa10.45□□□□□ -0.74
CCS-203ENST00000526058 C1orf137Q5JT78 98 aa10.45□□□□□ -0.74
CCS-203ENST00000526058 F8VRH5 84 aa10.44□□□□□ -0.74
CCS-203ENST00000526058 HBDP02042 147 aa10.44□□□□□ -0.74
CCS-203ENST00000526058 NDUFA6P56556 154 aa10.44□□□□□ -0.74
CCS-203ENST00000526058 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
CCS-203ENST00000526058 LINC01600Q96MT4 127 aa10.44□□□□□ -0.74
CCS-203ENST00000526058 M0QXV9 152 aa10.42□□□□□ -0.74
CCS-203ENST00000526058 CXCL5P42830 114 aa10.42□□□□□ -0.74
CCS-203ENST00000526058 RAB5BP61020 215 aa10.42□□□□□ -0.74
CCS-203ENST00000526058 XAGE1AQ9HD64 81 aa10.42□□□□□ -0.74
CCS-203ENST00000526058 IGLC3P0DOY3 106 aa10.41□□□□□ -0.74
CCS-203ENST00000526058 REG3GQ6UW15 175 aa10.41□□□□□ -0.74
CCS-203ENST00000526058 CBLN2Q8IUK8 224 aa10.41□□□□□ -0.74
CCS-203ENST00000526058 H3BRM9 83 aa10.39□□□□□ -0.75
CCS-203ENST00000526058 SLC7A5P1Q8MH63 180 aa10.39□□□□□ -0.75
CCS-203ENST00000526058 IGLV7-43P04211 117 aa10.38□□□□□ -0.75
CCS-203ENST00000526058 ZNF22P17026 224 aaPredicted RBP10.38□□□□□ -0.75
CCS-203ENST00000526058 UBE2BP63146 152 aa10.38□□□□□ -0.75
CCS-203ENST00000526058 ATP5LO75964 103 aa10.37□□□□□ -0.75
CCS-203ENST00000526058 ODF1Q14990 250 aa10.37□□□□□ -0.75
CCS-203ENST00000526058 BAGE3Q86Y29 109 aa10.37□□□□□ -0.75
CCS-203ENST00000526058 PLA2G2DQ9UNK4 145 aa10.37□□□□□ -0.75
CCS-203ENST00000526058 C22orf24Q9Y442 160 aa10.37□□□□□ -0.75
CCS-203ENST00000526058 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
CCS-203ENST00000526058 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
CCS-203ENST00000526058 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
CCS-203ENST00000526058 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
CCS-203ENST00000526058 TRGC2P03986 189 aa10.33□□□□□ -0.76
CCS-203ENST00000526058 DIRC1Q969H9 104 aa10.32□□□□□ -0.76
CCS-203ENST00000526058 CHTOPQ9Y3Y2 248 aaKnown RBP10.32□□□□□ -0.76
CCS-203ENST00000526058 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
CCS-203ENST00000526058 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
CCS-203ENST00000526058 FAM19A2Q8N3H0 131 aa10.31□□□□□ -0.76
CCS-203ENST00000526058 H0Y9J4 135 aa10.3□□□□□ -0.76
CCS-203ENST00000526058 PFN2P35080 140 aa10.3□□□□□ -0.76
CCS-203ENST00000526058 MRPL55Q7Z7F7 128 aaKnown RBP10.3□□□□□ -0.76
CCS-203ENST00000526058 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
CCS-203ENST00000526058 TP73-AS1Q9UF72 201 aa10.29□□□□□ -0.76
CCS-203ENST00000526058 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
CCS-203ENST00000526058 HSBP1O75506 76 aa10.28□□□□□ -0.76
CCS-203ENST00000526058 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
CCS-203ENST00000526058 LINC00310P59036 64 aa10.27□□□□□ -0.77
CCS-203ENST00000526058 LINC00167Q96N53 147 aa10.27□□□□□ -0.77
CCS-203ENST00000526058 ERG28Q9UKR5 140 aa10.27□□□□□ -0.77
CCS-203ENST00000526058 RPL37AP8A6NKH3 93 aa10.26□□□□□ -0.77
CCS-203ENST00000526058 COLCA2A8K830 154 aa10.26□□□□□ -0.77
CCS-203ENST00000526058 NUPR1O60356 82 aa10.26□□□□□ -0.77
CCS-203ENST00000526058 TMEM223A0PJW6 202 aa10.25□□□□□ -0.77
CCS-203ENST00000526058 GAGE10A6NGK3 116 aa10.25□□□□□ -0.77
CCS-203ENST00000526058 SERF1AO75920 110 aa10.25□□□□□ -0.77
CCS-203ENST00000526058 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
CCS-203ENST00000526058 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
CCS-203ENST00000526058 ZNF861PO60384 105 aa10.24□□□□□ -0.77
CCS-203ENST00000526058 SCO1O75880 301 aa10.24□□□□□ -0.77
CCS-203ENST00000526058 KRTAP1-4P0C5Y4 121 aa10.24□□□□□ -0.77
CCS-203ENST00000526058 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
CCS-203ENST00000526058 COX17Q14061 63 aa10.23□□□□□ -0.77
CCS-203ENST00000526058 NKAPP1Q8N9T2 125 aa10.23□□□□□ -0.77
CCS-203ENST00000526058 LRP2P98164 4655 aa10.23□□□□□ -0.77
CCS-203ENST00000526058 H0Y8G0 127 aa10.22□□□□□ -0.77
CCS-203ENST00000526058 BCE1O60756 84 aa10.21□□□□□ -0.77
CCS-203ENST00000526058 LEPROTL1O95214 131 aa10.21□□□□□ -0.77
CCS-203ENST00000526058 SFTA2Q6UW10 78 aa10.21□□□□□ -0.77
CCS-203ENST00000526058 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
CCS-203ENST00000526058 VPREB1P12018 145 aa10.19□□□□□ -0.78
CCS-203ENST00000526058 Q8NDZ9 215 aa10.19□□□□□ -0.78
CCS-203ENST00000526058 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
CCS-203ENST00000526058 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
CCS-203ENST00000526058 LINC00158P58513 81 aa10.18□□□□□ -0.78
CCS-203ENST00000526058 IGLV1-50A0A075B6I6 118 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms