RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 SPANXA1Q9NS26 97 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 LAMTOR2Q9Y2Q5 125 aa3.3□□□□□ -1.88
SVIP-202ENST00000525670 IGLV4-69A0A075B6H9 119 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 IGLV7-46A0A075B6I9 117 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 H0Y8G0 127 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 CDK2AP2O75956 126 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 MT-ND6P03923 174 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 XGP55808 180 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 NDUFA6P56556 154 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 COX6A2Q02221 97 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 RPL18AQ02543 176 aaKnown RBP3.29□□□□□ -1.88
SVIP-202ENST00000525670 ORMDL2Q53FV1 153 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 Q5VSD8 79 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 CD164L2Q6UWJ8 174 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 Q6ZN92 141 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 TEX43Q6ZNM6 134 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 C18orf32Q8TCD1 76 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 TMEM141Q96I45 108 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 YPEL4Q96NS1 127 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 SCGB3A1Q96QR1 104 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 TOMM7Q9P0U1 55 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
SVIP-202ENST00000525670 IGHV3-64A0A075B6Q5 118 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
SVIP-202ENST00000525670 IGHV1-58A0A0C4DH39 117 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 C1orf196B1AJZ1 125 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 TRGC2P03986 189 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 SMAGPQ0VAQ4 97 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 Q6ZRU5 148 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 DPH3Q96FX2 82 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 CAMK2N2Q96S95 79 aa3.28□□□□□ -1.88
SVIP-202ENST00000525670 SRRM2Q9UQ35 2752 aaKnown RBP3.28□□□□□ -1.89
SVIP-202ENST00000525670 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.89
SVIP-202ENST00000525670 FLG2Q5D862 2391 aaPredicted RBP3.27□□□□□ -1.89
SVIP-202ENST00000525670 A0A096LNI7 61 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.27□□□□□ -1.89
SVIP-202ENST00000525670 EPM2AB3EWF7 344 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 SPINK8P0C7L1 97 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 UBE2D1P51668 147 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 MRPS36P82909 103 aaKnown RBP3.27□□□□□ -1.89
SVIP-202ENST00000525670 GAGE2BQ13066 116 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 MAJINQ3KP22 176 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 COX19Q49B96 90 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 LINC00242Q5T6M2 205 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 CFAP161Q6P656 301 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 C2orf82Q6UX34 121 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 FAM19A2Q8N3H0 131 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 LINC00469Q8N7U9 141 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 TOMM6Q96B49 74 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 TIMM21Q9BVV7 248 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 VCX2Q9H322 139 aa3.27□□□□□ -1.89
SVIP-202ENST00000525670 A0A096LNJ9 63 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 IGLV9-49A0A0B4J1Y8 123 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 IGIPA6NJ69 53 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 HBDP02042 147 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
SVIP-202ENST00000525670 SYCNQ0VAF6 134 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 C9orf116Q5BN46 136 aaPredicted RBP3.26□□□□□ -1.89
SVIP-202ENST00000525670 BAGE3Q86Y29 109 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 C9orf163Q8N9P6 203 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 PACRGQ96M98 296 aaPredicted RBP3.26□□□□□ -1.89
SVIP-202ENST00000525670 CHAC1Q9BUX1 264 aa3.26□□□□□ -1.89
SVIP-202ENST00000525670 GEMIN7Q9H840 131 aaKnown RBP3.26□□□□□ -1.89
SVIP-202ENST00000525670 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
SVIP-202ENST00000525670 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 ATP6V1G1O75348 118 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 SERF1AO75920 110 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 APOMO95445 188 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 LINC00614P0C842 121 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 GAGE2EQ4V326 116 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 GAGE2AQ6NT46 116 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 UNQ6190/PRO20217Q6UXQ8 127 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 Q6ZSA8 131 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 AMELXQ99217 191 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 TIMM17AQ99595 171 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 GAGE2DQ9UEU5 116 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
SVIP-202ENST00000525670 FAM168BA1KXE4 195 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 COLCA2A8K830 154 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.24□□□□□ -1.89
SVIP-202ENST00000525670 NDUFA1O15239 70 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 HSBP1O75506 76 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 FABP4P15090 132 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 PMVKQ15126 192 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 SDIM1Q6ZPB5 146 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 ERASQ7Z444 233 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 FAM19A5Q7Z5A7 132 aaPredicted RBP3.24□□□□□ -1.89
SVIP-202ENST00000525670 SPACA4Q8TDM5 124 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 PMCHL2Q9BQD1 86 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 C6orf48Q9UBA6 75 aa3.24□□□□□ -1.89
SVIP-202ENST00000525670 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms