RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 HNRNPA3P51991 378 aaKnown RBP11□□□□□ -0.65
NR1H3-228ENST00000525441 HERC1Q15751 4861 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 A0A096LNJ9 63 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 NUPR1O60356 82 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 HSBP1O75506 76 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 HBDP02042 147 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 NDUFA6P56556 154 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 HERVK_113P63121 156 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
NR1H3-228ENST00000525441 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
NR1H3-228ENST00000525441 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
NR1H3-228ENST00000525441 GEMIN7Q9H840 131 aaKnown RBP10.98□□□□□ -0.65
NR1H3-228ENST00000525441 PRSS2P07478 247 aa10.97□□□□□ -0.65
NR1H3-228ENST00000525441 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
NR1H3-228ENST00000525441 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
NR1H3-228ENST00000525441 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
NR1H3-228ENST00000525441 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
NR1H3-228ENST00000525441 PRR3P79522 188 aaKnown RBP10.96□□□□□ -0.65
NR1H3-228ENST00000525441 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
NR1H3-228ENST00000525441 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
NR1H3-228ENST00000525441 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
NR1H3-228ENST00000525441 C9orf116Q5BN46 136 aaPredicted RBP10.95□□□□□ -0.66
NR1H3-228ENST00000525441 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
NR1H3-228ENST00000525441 A0A1W2PNN7 141 aa10.94□□□□□ -0.66
NR1H3-228ENST00000525441 TOMM7Q9P0U1 55 aa10.94□□□□□ -0.66
NR1H3-228ENST00000525441 PKHD1L1Q86WI1 4243 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 S100A6P06703 90 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 CKS1BP61024 79 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 C2orf82Q6UX34 121 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 Q6ZRP5 223 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 Q8IZM0 81 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
NR1H3-228ENST00000525441 LINC00469Q8N7U9 141 aa10.92□□□□□ -0.66
NR1H3-228ENST00000525441 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
NR1H3-228ENST00000525441 TINCRA0A1B0GVN0 87 aa10.91□□□□□ -0.66
NR1H3-228ENST00000525441 ATP5LO75964 103 aa10.91□□□□□ -0.66
NR1H3-228ENST00000525441 PMVKQ15126 192 aa10.91□□□□□ -0.66
NR1H3-228ENST00000525441 GAGE2EQ4V326 116 aa10.91□□□□□ -0.66
NR1H3-228ENST00000525441 GAGE2DQ9UEU5 116 aa10.91□□□□□ -0.66
NR1H3-228ENST00000525441 NDUFC2-KCTD14E9PQ53 114 aa10.9□□□□□ -0.66
NR1H3-228ENST00000525441 LEPROTL1O95214 131 aa10.9□□□□□ -0.66
NR1H3-228ENST00000525441 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.66
NR1H3-228ENST00000525441 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
NR1H3-228ENST00000525441 HIST3H2BBQ8N257 126 aa10.89□□□□□ -0.67
NR1H3-228ENST00000525441 CXCL5P42830 114 aa10.88□□□□□ -0.67
NR1H3-228ENST00000525441 SNRPEP62304 92 aaKnown RBP10.88□□□□□ -0.67
NR1H3-228ENST00000525441 IFI27L1Q96BM0 104 aa10.88□□□□□ -0.67
NR1H3-228ENST00000525441 HSPB8Q9UJY1 196 aa10.88□□□□□ -0.67
NR1H3-228ENST00000525441 FAT3Q8TDW7 4589 aa10.87□□□□□ -0.67
NR1H3-228ENST00000525441 IGLV5-45A0A087WSX0 123 aa10.87□□□□□ -0.67
NR1H3-228ENST00000525441 TMA7Q9Y2S6 64 aaKnown RBP10.87□□□□□ -0.67
NR1H3-228ENST00000525441 SMIM1B2RUZ4 78 aa10.86□□□□□ -0.67
NR1H3-228ENST00000525441 F8VRH5 84 aa10.86□□□□□ -0.67
NR1H3-228ENST00000525441 FABP4P15090 132 aa10.86□□□□□ -0.67
NR1H3-228ENST00000525441 SPINK6Q6UWN8 80 aa10.86□□□□□ -0.67
NR1H3-228ENST00000525441 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
NR1H3-228ENST00000525441 FAM168BA1KXE4 195 aa10.85□□□□□ -0.67
NR1H3-228ENST00000525441 H3BRM9 83 aa10.85□□□□□ -0.67
NR1H3-228ENST00000525441 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
NR1H3-228ENST00000525441 S100A2P29034 98 aa10.84□□□□□ -0.67
NR1H3-228ENST00000525441 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
NR1H3-228ENST00000525441 PSORS1C2Q9UIG4 136 aa10.84□□□□□ -0.67
NR1H3-228ENST00000525441 SERTAD4-AS1Q5TG53 156 aa10.83□□□□□ -0.68
NR1H3-228ENST00000525441 HIST1H2BLQ99880 126 aa10.83□□□□□ -0.68
NR1H3-228ENST00000525441 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
NR1H3-228ENST00000525441 SPINK8P0C7L1 97 aa10.82□□□□□ -0.68
NR1H3-228ENST00000525441 IGLC3P0DOY3 106 aa10.82□□□□□ -0.68
NR1H3-228ENST00000525441 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
NR1H3-228ENST00000525441 M0QXV9 152 aa10.81□□□□□ -0.68
NR1H3-228ENST00000525441 SRSF9Q13242 221 aaKnown RBP eCLIP10.81□□□□□ -0.68
NR1H3-228ENST00000525441 C1orf137Q5JT78 98 aa10.81□□□□□ -0.68
NR1H3-228ENST00000525441 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
NR1H3-228ENST00000525441 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
NR1H3-228ENST00000525441 MT1HL1P0DM35 61 aa10.79□□□□□ -0.68
NR1H3-228ENST00000525441 UBE2BP63146 152 aa10.79□□□□□ -0.68
NR1H3-228ENST00000525441 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
NR1H3-228ENST00000525441 C3orf79P0CE67 100 aa10.78□□□□□ -0.68
NR1H3-228ENST00000525441 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
NR1H3-228ENST00000525441 LINC01600Q96MT4 127 aa10.78□□□□□ -0.68
NR1H3-228ENST00000525441 ZNF22P17026 224 aaPredicted RBP10.77□□□□□ -0.69
NR1H3-228ENST00000525441 ODF1Q14990 250 aa10.77□□□□□ -0.69
NR1H3-228ENST00000525441 PET117Q6UWS5 81 aa10.77□□□□□ -0.69
NR1H3-228ENST00000525441 XAGE1AQ9HD64 81 aa10.77□□□□□ -0.69
NR1H3-228ENST00000525441 CHTOPQ9Y3Y2 248 aaKnown RBP10.76□□□□□ -0.69
NR1H3-228ENST00000525441 IGLV5-39A0A0G2JS06 123 aa10.75□□□□□ -0.69
NR1H3-228ENST00000525441 H0Y8G0 127 aa10.75□□□□□ -0.69
NR1H3-228ENST00000525441 KRTDAPP60985 99 aa10.75□□□□□ -0.69
NR1H3-228ENST00000525441 IGLV7-43P04211 117 aa10.74□□□□□ -0.69
NR1H3-228ENST00000525441 LBHQ53QV2 105 aaPredicted RBP10.74□□□□□ -0.69
NR1H3-228ENST00000525441 LINC01545Q5VT33 79 aa10.74□□□□□ -0.69
NR1H3-228ENST00000525441 C11orf86A6NJI1 115 aa10.73□□□□□ -0.69
NR1H3-228ENST00000525441 TMEM170BQ5T4T1 132 aa10.73□□□□□ -0.69
NR1H3-228ENST00000525441 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
NR1H3-228ENST00000525441 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
NR1H3-228ENST00000525441 DIRC1Q969H9 104 aa10.72□□□□□ -0.69
NR1H3-228ENST00000525441 PLNP26678 52 aa10.71□□□□□ -0.69
NR1H3-228ENST00000525441 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
NR1H3-228ENST00000525441 TP73-AS1Q9UF72 201 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms