RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TRAPPC2BP0DI82 140 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 KDELR1P24390 212 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 RRAS2P62070 204 aaPredicted RBP1.45□□□□□ -2.18
CSDE1-209ENST00000525132 LSM3P62310 102 aaKnown RBP1.45□□□□□ -2.18
CSDE1-209ENST00000525132 QRFPP83859 136 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 DIAPH2-AS1Q14236 149 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 KRTAP20-2Q3LI61 65 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 HAGHLQ6PII5 290 aaPredicted RBP1.45□□□□□ -2.18
CSDE1-209ENST00000525132 CTAGE3PQ8IX95 158 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 OR5AS1Q8N127 324 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 LINC00311Q8N616 119 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 TMEM254Q8TBM7 123 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 ARL11Q969Q4 196 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 RAB37Q96AX2 223 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 TCEAL7Q9BRU2 100 aa1.45□□□□□ -2.18
CSDE1-209ENST00000525132 LOC107986453A0A1B0GWG9 222 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 C2orf70A6NJV1 201 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 ZNF727A8MUV8 499 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 FAM25AB3EWG3 89 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 FAM25CB3EWG5 89 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 FAM25GB3EWG6 89 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 DLEU1O43261 78 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 GNG7O60262 68 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 NCR2O95944 276 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 GPX1P07203 203 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 SAA1P0DJI8 122 aaPredicted RBP1.44□□□□□ -2.18
CSDE1-209ENST00000525132 LINC00694P0DN24 101 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 CCL3L1P16619 93 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 S100PP25815 95 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 ZNF93P35789 620 aaPredicted RBP1.44□□□□□ -2.18
CSDE1-209ENST00000525132 AKR1D1P51857 326 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 COPZ1P61923 177 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 SNRPD3P62318 126 aaKnown RBP1.44□□□□□ -2.18
CSDE1-209ENST00000525132 CDK6Q00534 326 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 OR5AK2Q8NH90 309 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 SNRNP25Q9BV90 132 aaKnown RBP1.44□□□□□ -2.18
CSDE1-209ENST00000525132 FKBP11Q9NYL4 201 aa1.44□□□□□ -2.18
CSDE1-209ENST00000525132 TRAV12-1A0A0B4J245 112 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 FAM236AA0A1B0GUQ0 79 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 FAM236BA0A1B0GV22 79 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 F8W036 122 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 HLA-DRB4P13762 266 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 HIST1H1BP16401 226 aaKnown RBP1.43□□□□□ -2.18
CSDE1-209ENST00000525132 RBM3P98179 157 aaKnown RBP1.43□□□□□ -2.18
CSDE1-209ENST00000525132 ARPINQ7Z6K5 226 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 TCTEX1D1Q8N7M0 179 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 OR10AC1Q8NH08 325 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 SFT2D1Q8WV19 159 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 PPP3R2Q96LZ3 170 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 TXNDC17Q9BRA2 123 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 C2orf88Q9BSF0 95 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 GGACTQ9BVM4 153 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 MED9Q9NWA0 146 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 COMMD3Q9UBI1 195 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 HLA-DRB4X5D2U9 266 aa1.43□□□□□ -2.18
CSDE1-209ENST00000525132 TRAV27A0A087WT01 109 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 C9orf170A2RU37 121 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 E7EUB6 86 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 ZNF670-ZNF695F2Z2N8 137 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 ERC2-IT1O76042 136 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 TRACP01848 142 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 CD2P06729 351 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 SLC25A4P12235 298 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 PCBD1P61457 104 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 SELENOWP63302 87 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 Q1T7F1 81 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 C2orf82Q6UX34 121 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 TMEM91Q6ZNR0 172 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 CLECL1Q8IZS7 167 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 TMEM203Q969S6 136 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 SLC35B3Q9H1N7 401 aa1.42□□□□□ -2.18
CSDE1-209ENST00000525132 TRAV14DV4A0A0A6YYC5 116 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 PNMA8CA0A1B0GUJ8 204 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 H3BQF6 201 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 M0R129 80 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 PITX3O75364 302 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 CD3DP04234 171 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 CD14P08571 375 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 ETV6P41212 452 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 EMX2Q04743 252 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 PDE6HQ13956 83 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 CLLU1Q5K131 121 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 TEN1Q86WV5 123 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 OTOSQ8NHW6 89 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 NAA38Q9BRA0 125 aaKnown RBP1.41□□□□□ -2.18
CSDE1-209ENST00000525132 CST11Q9H112 138 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 COA4Q9NYJ1 87 aa1.41□□□□□ -2.18
CSDE1-209ENST00000525132 METTL1Q9UBP6 276 aaKnown RBP1.41□□□□□ -2.18
CSDE1-209ENST00000525132 A0A087WSZ3 146 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 C3orf85A0A1B0GTC6 90 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 MRPS14O60783 128 aaKnown RBP1.4□□□□□ -2.19
CSDE1-209ENST00000525132 IGLV3-1P01715 115 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 RBP4P02753 201 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 IGKV4-1P06312 121 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 CKS2P33552 79 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 GUCA1AP43080 201 aaPredicted RBP1.4□□□□□ -2.19
CSDE1-209ENST00000525132 GLIPR1L1Q6UWM5 242 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 CASC2Q6XLA1 102 aa1.4□□□□□ -2.19
CSDE1-209ENST00000525132 FAM19A2Q8N3H0 131 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms