RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
CD44-212ENST00000524922 IGHV3-73A0A0B4J1V6 119 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 C7orf77A4D0Y5 90 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 GRIFINA4D1Z8 144 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 CCDC160A6NGH7 325 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 ZNF727A8MUV8 499 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 F6UZH7 168 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 H3BVH4 76 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 I3L3M4 83 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 K7EMI3 77 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 SSSCA1O60232 199 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 NDUFB6O95139 128 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 IFNA1P01562 189 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 IGKV4-1P06312 121 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 METTL15P1P0C7V9 234 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 IGLC6P0CF74 106 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 PET100P0DJ07 73 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 RPL12P30050 165 aaKnown RBP0.7□□□□□ -2.3
CD44-212ENST00000524922 SPRR1AP35321 89 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 TAGLN2P37802 199 aaKnown RBP0.7□□□□□ -2.3
CD44-212ENST00000524922 XCL1P47992 114 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 UBE2G2P60604 165 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 NCS1P62166 190 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 RANP62826 216 aaKnown RBP0.7□□□□□ -2.3
CD44-212ENST00000524922 HERV-K104P63124 156 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 GNGT1P63211 74 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 SEC11AP67812 179 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 COX17Q14061 63 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 KIAA0087Q14695 138 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 ZNF56Q15929 161 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 Q5BKY6 102 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 SPANXN1Q5VSR9 72 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 SLC25A34Q6PIV7 304 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 ALKAL2Q6UX46 152 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 Q8IZM0 81 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 TMEM252Q8N6L7 170 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 HYLS1Q96M11 299 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 TMEM126AQ9H061 195 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 VCX3AQ9NNX9 186 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 SPANXA1Q9NS26 97 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 C6orf48Q9UBA6 75 aa0.7□□□□□ -2.3
CD44-212ENST00000524922 TRBV20-1A0A075B6N2 111 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 TGIF2-C20orf24A0A0A6YYL0 155 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 UBE2L5PA0A1B0GUS4 154 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 C9orf170A2RU37 121 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 SDHAF1A6NFY7 115 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 LINC01549A6NIU2 74 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 ZNF815PA8K554 130 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 F8VRH5 84 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 H3BP45 60 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 H3BTX0 84 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 PEX7O00628 323 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 SH2D1AO60880 128 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 SIX6O95475 246 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 CXorf1O96002 111 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 SPRR1BP22528 89 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 UBE2AP49459 152 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 CRIP1P50238 77 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 NKX2-5P52952 324 aaPredicted RBP0.69□□□□□ -2.3
CD44-212ENST00000524922 POLR2KP53803 58 aaKnown RBP0.69□□□□□ -2.3
CD44-212ENST00000524922 FOXA3P55318 350 aaPredicted RBP0.69□□□□□ -2.3
CD44-212ENST00000524922 NDUFA6P56556 154 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 SSTP61278 116 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 RRAS2P62070 204 aaPredicted RBP0.69□□□□□ -2.3
CD44-212ENST00000524922 PPP1R1AQ13522 171 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 CLPSL2Q6UWE3 100 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 MIR17HGQ75NE6 70 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 FAM19A5Q7Z5A7 132 aaPredicted RBP0.69□□□□□ -2.3
CD44-212ENST00000524922 AMN1Q8IY45 258 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 C9orf62Q8N4C0 152 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 OR10AG1Q8NH19 301 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 STOML3Q8TAV4 291 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 SEC22CQ9BRL7 303 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 FAM107BQ9H098 131 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 Q9H521 79 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 PAIP2BQ9ULR5 123 aaKnown RBP0.69□□□□□ -2.3
CD44-212ENST00000524922 CBY1Q9Y3M2 126 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 ALG5Q9Y673 324 aa0.69□□□□□ -2.3
CD44-212ENST00000524922 TRBV24-1A0A075B6N3 115 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 A0A1W2PPV4 95 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 LINC00862A6NCI5 91 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 A6NN06 94 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 M0R378 163 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 IGLV6-57P01721 117 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 CDC34P49427 236 aaPredicted RBP0.68□□□□□ -2.3
CD44-212ENST00000524922 UBE2G1P62253 170 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 HBBP68871 147 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 C5orf47Q569G3 176 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 GCSAMLQ5JQS6 135 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 Q6ZN92 141 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 ATP11AUNQ6ZP68 121 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 LINC00299Q6ZSB3 139 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 CBLN2Q8IUK8 224 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 MTURNQ8N3F0 131 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 TOMM5Q8N4H5 51 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 ORAOV1Q8WV07 137 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 ZNF625Q96I27 306 aaPredicted RBP0.68□□□□□ -2.3
CD44-212ENST00000524922 C20orf166-AS1Q96NR2 134 aa0.68□□□□□ -2.3
CD44-212ENST00000524922 C20orf78Q9BR46 151 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms