RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 TMEM170BQ5T4T1 132 aa11.34□□□□□ -0.59
PACSIN3-202ENST00000524509 SFTA2Q6UW10 78 aa11.34□□□□□ -0.59
PACSIN3-202ENST00000524509 SDIM1Q6ZPB5 146 aa11.34□□□□□ -0.59
PACSIN3-202ENST00000524509 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
PACSIN3-202ENST00000524509 TRBV30A0A0K0K1B3 111 aa11.33□□□□□ -0.6
PACSIN3-202ENST00000524509 SMIM1B2RUZ4 78 aa11.33□□□□□ -0.6
PACSIN3-202ENST00000524509 Q6ZSA8 131 aa11.33□□□□□ -0.6
PACSIN3-202ENST00000524509 LINC00526Q96FQ7 95 aa11.33□□□□□ -0.6
PACSIN3-202ENST00000524509 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
PACSIN3-202ENST00000524509 LOC107984640A0A0U1RRK4 108 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 H0Y8G0 127 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 AKR1D1P51857 326 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 ODF1Q14990 250 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 Q6ZRU5 148 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 COX7B2Q8TF08 81 aa11.32□□□□□ -0.6
PACSIN3-202ENST00000524509 VPS13BQ7Z7G8 4022 aa11.31□□□□□ -0.6
PACSIN3-202ENST00000524509 DPM2O94777 84 aa11.3□□□□□ -0.6
PACSIN3-202ENST00000524509 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
PACSIN3-202ENST00000524509 S100A2P29034 98 aa11.3□□□□□ -0.6
PACSIN3-202ENST00000524509 LINC01620Q4KN68 170 aa11.3□□□□□ -0.6
PACSIN3-202ENST00000524509 DPH3Q96FX2 82 aa11.3□□□□□ -0.6
PACSIN3-202ENST00000524509 IGLV5-39A0A0G2JS06 123 aa11.29□□□□□ -0.6
PACSIN3-202ENST00000524509 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
PACSIN3-202ENST00000524509 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
PACSIN3-202ENST00000524509 HERVK_113P61574 105 aa11.28□□□□□ -0.6
PACSIN3-202ENST00000524509 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
PACSIN3-202ENST00000524509 C20orf202A1L168 122 aa11.27□□□□□ -0.61
PACSIN3-202ENST00000524509 IGKCP01834 107 aa11.27□□□□□ -0.61
PACSIN3-202ENST00000524509 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
PACSIN3-202ENST00000524509 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
PACSIN3-202ENST00000524509 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
PACSIN3-202ENST00000524509 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
PACSIN3-202ENST00000524509 FAM30AQ9NZY2 134 aa11.25□□□□□ -0.61
PACSIN3-202ENST00000524509 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
PACSIN3-202ENST00000524509 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
PACSIN3-202ENST00000524509 PTTG1IPP53801 180 aa11.23□□□□□ -0.61
PACSIN3-202ENST00000524509 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
PACSIN3-202ENST00000524509 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
PACSIN3-202ENST00000524509 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
PACSIN3-202ENST00000524509 SPACA4Q8TDM5 124 aa11.23□□□□□ -0.61
PACSIN3-202ENST00000524509 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
PACSIN3-202ENST00000524509 C3orf79P0CE67 100 aa11.22□□□□□ -0.61
PACSIN3-202ENST00000524509 KRTDAPP60985 99 aa11.22□□□□□ -0.61
PACSIN3-202ENST00000524509 MAJINQ3KP22 176 aa11.22□□□□□ -0.61
PACSIN3-202ENST00000524509 HIST3H2BBQ8N257 126 aa11.22□□□□□ -0.61
PACSIN3-202ENST00000524509 PLEKHB2Q96CS7 222 aa11.22□□□□□ -0.61
PACSIN3-202ENST00000524509 LINC00587B1AMM8 73 aa11.21□□□□□ -0.61
PACSIN3-202ENST00000524509 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
PACSIN3-202ENST00000524509 J3QL48 77 aa11.21□□□□□ -0.61
PACSIN3-202ENST00000524509 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.61
PACSIN3-202ENST00000524509 GAGE2BQ13066 116 aa11.21□□□□□ -0.61
PACSIN3-202ENST00000524509 SCXQ7RTU7 201 aa11.21□□□□□ -0.61
PACSIN3-202ENST00000524509 A0A096LNI7 61 aa11.2□□□□□ -0.62
PACSIN3-202ENST00000524509 COX17Q14061 63 aa11.2□□□□□ -0.62
PACSIN3-202ENST00000524509 CIRBP-AS1Q8TBR5 109 aa11.2□□□□□ -0.62
PACSIN3-202ENST00000524509 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
PACSIN3-202ENST00000524509 HERV-K104P63124 156 aa11.19□□□□□ -0.62
PACSIN3-202ENST00000524509 PLAC8Q9NZF1 115 aa11.19□□□□□ -0.62
PACSIN3-202ENST00000524509 LEPROTO15243 131 aa11.18□□□□□ -0.62
PACSIN3-202ENST00000524509 STPG4Q8N801 248 aa11.18□□□□□ -0.62
PACSIN3-202ENST00000524509 HIST1H2BLQ99880 126 aa11.18□□□□□ -0.62
PACSIN3-202ENST00000524509 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
PACSIN3-202ENST00000524509 UBR4Q5T4S7 5183 aa11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 A0A087WYN8 130 aa11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 CHTF8P0CG12 524 aa11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 NMUP48645 174 aa11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 Q6ZRP5 223 aa11.17□□□□□ -0.62
PACSIN3-202ENST00000524509 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
PACSIN3-202ENST00000524509 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
PACSIN3-202ENST00000524509 GAGE2EQ4V326 116 aa11.15□□□□□ -0.62
PACSIN3-202ENST00000524509 GAGE2DQ9UEU5 116 aa11.15□□□□□ -0.62
PACSIN3-202ENST00000524509 NDUFA12Q9UI09 145 aa11.15□□□□□ -0.62
PACSIN3-202ENST00000524509 E9PLD3 99 aa11.14□□□□□ -0.63
PACSIN3-202ENST00000524509 J3QQQ9 107 aa11.14□□□□□ -0.63
PACSIN3-202ENST00000524509 C9orf116Q5BN46 136 aaPredicted RBP11.14□□□□□ -0.63
PACSIN3-202ENST00000524509 C7orf33Q8WU49 177 aa11.14□□□□□ -0.63
PACSIN3-202ENST00000524509 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
PACSIN3-202ENST00000524509 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
PACSIN3-202ENST00000524509 PANO1I0J062 215 aa11.13□□□□□ -0.63
PACSIN3-202ENST00000524509 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
PACSIN3-202ENST00000524509 KRTAP29-1A8MX34 341 aaPredicted RBP11.11□□□□□ -0.63
PACSIN3-202ENST00000524509 HMCN2Q8NDA2 5059 aa11.11□□□□□ -0.63
PACSIN3-202ENST00000524509 PFN2P35080 140 aa11.1□□□□□ -0.63
PACSIN3-202ENST00000524509 HAMPP81172 84 aa11.1□□□□□ -0.63
PACSIN3-202ENST00000524509 LINC00158P58513 81 aa11.09□□□□□ -0.63
PACSIN3-202ENST00000524509 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
PACSIN3-202ENST00000524509 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
PACSIN3-202ENST00000524509 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
PACSIN3-202ENST00000524509 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
PACSIN3-202ENST00000524509 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
PACSIN3-202ENST00000524509 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
PACSIN3-202ENST00000524509 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
PACSIN3-202ENST00000524509 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
PACSIN3-202ENST00000524509 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
PACSIN3-202ENST00000524509 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms