RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 IGLC3P0DOY3 106 aa7.94□□□□□ -1.14
CCNC-216ENST00000523961 PTTG1IPP53801 180 aa7.94□□□□□ -1.14
CCNC-216ENST00000523961 GAGE2BQ13066 116 aa7.94□□□□□ -1.14
CCNC-216ENST00000523961 C6orf226Q5I0X4 101 aa7.94□□□□□ -1.14
CCNC-216ENST00000523961 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
CCNC-216ENST00000523961 STPG4Q8N801 248 aa7.94□□□□□ -1.14
CCNC-216ENST00000523961 TRBV30A0A0K0K1B3 111 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 A6NJY4 79 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 H3BRM9 83 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 CKS1BP61024 79 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
CCNC-216ENST00000523961 C2orf82Q6UX34 121 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 IFI27L1Q96BM0 104 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 C6orf48Q9UBA6 75 aa7.93□□□□□ -1.14
CCNC-216ENST00000523961 FAT1Q14517 4588 aa7.92□□□□□ -1.14
CCNC-216ENST00000523961 SERF1AO75920 110 aa7.92□□□□□ -1.14
CCNC-216ENST00000523961 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
CCNC-216ENST00000523961 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
CCNC-216ENST00000523961 FAM19A2Q8N3H0 131 aa7.92□□□□□ -1.14
CCNC-216ENST00000523961 CXCL5P42830 114 aa7.91□□□□□ -1.14
CCNC-216ENST00000523961 TRAV12-1A0A0B4J245 112 aa7.9□□□□□ -1.14
CCNC-216ENST00000523961 SPINK8P0C7L1 97 aa7.9□□□□□ -1.14
CCNC-216ENST00000523961 LINC00310P59036 64 aa7.9□□□□□ -1.14
CCNC-216ENST00000523961 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.14
CCNC-216ENST00000523961 COX7B2Q8TF08 81 aa7.9□□□□□ -1.14
CCNC-216ENST00000523961 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
CCNC-216ENST00000523961 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
CCNC-216ENST00000523961 F8VRH5 84 aa7.89□□□□□ -1.15
CCNC-216ENST00000523961 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
CCNC-216ENST00000523961 ZNF22P17026 224 aaPredicted RBP7.89□□□□□ -1.15
CCNC-216ENST00000523961 C11orf86A6NJI1 115 aa7.88□□□□□ -1.15
CCNC-216ENST00000523961 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
CCNC-216ENST00000523961 S100A1P23297 94 aa7.88□□□□□ -1.15
CCNC-216ENST00000523961 Q6ZRP5 223 aa7.88□□□□□ -1.15
CCNC-216ENST00000523961 ABCA13Q86UQ4 5058 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 SRRM2Q9UQ35 2752 aaKnown RBP7.87□□□□□ -1.15
CCNC-216ENST00000523961 IGLV5-39A0A0G2JS06 123 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 NUPR1O60356 82 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BKO60814 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BJP06899 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BOP23527 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BBP33778 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BDP58876 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BCP62807 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST2H2BEQ16778 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 GAGE2EQ4V326 116 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.87□□□□□ -1.15
CCNC-216ENST00000523961 TMEM170BQ5T4T1 132 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BHQ93079 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BNQ99877 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HIST1H2BMQ99879 126 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 GAGE2DQ9UEU5 116 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 HSPB8Q9UJY1 196 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
CCNC-216ENST00000523961 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
CCNC-216ENST00000523961 FABP4P15090 132 aa7.85□□□□□ -1.15
CCNC-216ENST00000523961 VPS13BQ7Z7G8 4022 aa7.84□□□□□ -1.15
CCNC-216ENST00000523961 H0Y8G0 127 aa7.84□□□□□ -1.15
CCNC-216ENST00000523961 ATP6V1G1O75348 118 aa7.84□□□□□ -1.15
CCNC-216ENST00000523961 ODF1Q14990 250 aa7.83□□□□□ -1.16
CCNC-216ENST00000523961 FLG2Q5D862 2391 aaPredicted RBP7.83□□□□□ -1.16
CCNC-216ENST00000523961 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
CCNC-216ENST00000523961 SFTA2Q6UW10 78 aa7.82□□□□□ -1.16
CCNC-216ENST00000523961 FAM168BA1KXE4 195 aa7.81□□□□□ -1.16
CCNC-216ENST00000523961 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
CCNC-216ENST00000523961 FAM19A5Q7Z5A7 132 aaPredicted RBP7.81□□□□□ -1.16
CCNC-216ENST00000523961 MAP1LC3CQ9BXW4 147 aa7.81□□□□□ -1.16
CCNC-216ENST00000523961 PLNP26678 52 aa7.8□□□□□ -1.16
CCNC-216ENST00000523961 PRR3P79522 188 aaKnown RBP7.8□□□□□ -1.16
CCNC-216ENST00000523961 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
CCNC-216ENST00000523961 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
CCNC-216ENST00000523961 DPM2O94777 84 aa7.79□□□□□ -1.16
CCNC-216ENST00000523961 COA6Q5JTJ3 125 aaKnown RBP7.79□□□□□ -1.16
CCNC-216ENST00000523961 M0QXV9 152 aa7.78□□□□□ -1.16
CCNC-216ENST00000523961 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
CCNC-216ENST00000523961 XP32Q5T750 250 aa7.78□□□□□ -1.16
CCNC-216ENST00000523961 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
CCNC-216ENST00000523961 ZNF625Q96I27 306 aaPredicted RBP7.78□□□□□ -1.16
CCNC-216ENST00000523961 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
CCNC-216ENST00000523961 IGKCP01834 107 aa7.77□□□□□ -1.17
CCNC-216ENST00000523961 PFN2P35080 140 aa7.77□□□□□ -1.17
CCNC-216ENST00000523961 COX17Q14061 63 aa7.77□□□□□ -1.17
CCNC-216ENST00000523961 HERVK_113P61574 105 aa7.76□□□□□ -1.17
CCNC-216ENST00000523961 PMCHL2Q9BQD1 86 aa7.76□□□□□ -1.17
CCNC-216ENST00000523961 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
CCNC-216ENST00000523961 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
CCNC-216ENST00000523961 PLEKHB2Q96CS7 222 aa7.75□□□□□ -1.17
CCNC-216ENST00000523961 PSORS1C2Q9UIG4 136 aa7.75□□□□□ -1.17
CCNC-216ENST00000523961 PLA2G2DQ9UNK4 145 aa7.75□□□□□ -1.17
CCNC-216ENST00000523961 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
CCNC-216ENST00000523961 LEPROTO15243 131 aa7.74□□□□□ -1.17
CCNC-216ENST00000523961 HERV-K104P63124 156 aa7.74□□□□□ -1.17
CCNC-216ENST00000523961 UBE2BP63146 152 aa7.74□□□□□ -1.17
CCNC-216ENST00000523961 LBHQ53QV2 105 aaPredicted RBP7.74□□□□□ -1.17
CCNC-216ENST00000523961 PET117Q6UWS5 81 aa7.74□□□□□ -1.17
CCNC-216ENST00000523961 TP73-AS1Q9UF72 201 aa7.74□□□□□ -1.17
CCNC-216ENST00000523961 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms