RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 V9GYV3 84 aa4.6□□□□□ -1.67
NSMCE2-213ENST00000523824 IGLV4-3A0A075B6K6 122 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 IGKV2D-26A0A0A0MRZ7 120 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 RAB5AP20339 215 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 BLOC1S1P78537 153 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 FAM229BQ4G0N7 80 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 Q6ZN92 141 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 TMEM141Q96I45 108 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 EIF5A2Q9GZV4 153 aaKnown RBP4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 PPDPFQ9H3Y8 114 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 PYGO1Q9Y3Y4 419 aa4.59□□□□□ -1.67
NSMCE2-213ENST00000523824 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 A0A1B0GW15 77 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 RPL37AP8A6NKH3 93 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 D6R8Y8 96 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 UBE2AP49459 152 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 FAM74A3Q4VXF1 159 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 TEX43Q6ZNM6 134 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 ANAPC16Q96DE5 110 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 LINC00167Q96N53 147 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 C2orf88Q9BSF0 95 aa4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
NSMCE2-213ENST00000523824 GAGE10A6NGK3 116 aa4.57□□□□□ -1.68
NSMCE2-213ENST00000523824 F8W036 122 aa4.57□□□□□ -1.68
NSMCE2-213ENST00000523824 NPYP01303 97 aa4.57□□□□□ -1.68
NSMCE2-213ENST00000523824 CTAG1AP78358 180 aa4.57□□□□□ -1.68
NSMCE2-213ENST00000523824 Q8IZM0 81 aa4.57□□□□□ -1.68
NSMCE2-213ENST00000523824 LINC00337Q8N6G1 96 aa4.57□□□□□ -1.68
NSMCE2-213ENST00000523824 hCG_2014768A0A024R1R8 64 aa4.56□□□□□ -1.68
NSMCE2-213ENST00000523824 F8VRH5 84 aa4.56□□□□□ -1.68
NSMCE2-213ENST00000523824 PPBPP02775 128 aa4.56□□□□□ -1.68
NSMCE2-213ENST00000523824 ZC2HC1BQ5TFG8 222 aa4.56□□□□□ -1.68
NSMCE2-213ENST00000523824 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
NSMCE2-213ENST00000523824 VCX2Q9H322 139 aa4.56□□□□□ -1.68
NSMCE2-213ENST00000523824 SMIM27A0A1W2PRY6 76 aa4.55□□□□□ -1.68
NSMCE2-213ENST00000523824 S100A8P05109 93 aa4.55□□□□□ -1.68
NSMCE2-213ENST00000523824 MRPL54Q6P161 138 aaKnown RBP4.55□□□□□ -1.68
NSMCE2-213ENST00000523824 ALKAL2Q6UX46 152 aa4.55□□□□□ -1.68
NSMCE2-213ENST00000523824 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
NSMCE2-213ENST00000523824 LOC389332A0A1B0GUA5 103 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 SRP19P09132 144 aaKnown RBP4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 LINC00310P59036 64 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 RPL23P62829 140 aaKnown RBP4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 PNRC1Q12796 327 aaPredicted RBP4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 ADIRFQ15847 76 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 C2orf66Q6UXQ4 117 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 TMEM136Q6ZRR5 245 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 ORMDL3Q8N138 153 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 NKAPP1Q8N9T2 125 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 PRELID3AQ96N28 172 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 CYSLTR1Q9Y271 337 aa4.54□□□□□ -1.68
NSMCE2-213ENST00000523824 CXCL5P42830 114 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 HERVK_113P63121 156 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 SEC11AP67812 179 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 ASB16-AS1Q495Z4 193 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 ANKRD39Q53RE8 183 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 SPAG11AQ6PDA7 123 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 TCTE3Q8IZS6 198 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 AMELXQ99217 191 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 CDKN2A-AS1Q9UH64 79 aa4.53□□□□□ -1.68
NSMCE2-213ENST00000523824 IGLV5-37A0A075B6J1 123 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 IGKV2-28A0A075B6P5 120 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 IGKV2D-28P01615 120 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 RAB5BP61020 215 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 PRLHP81277 87 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 FAM19A3Q7Z5A8 133 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 FAM19A1Q7Z5A9 133 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 MAP1LC3AQ9H492 121 aa4.52□□□□□ -1.69
NSMCE2-213ENST00000523824 A0A1B0GXF2 115 aa4.51□□□□□ -1.69
NSMCE2-213ENST00000523824 NPSP0C0P6 89 aa4.51□□□□□ -1.69
NSMCE2-213ENST00000523824 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
NSMCE2-213ENST00000523824 NAT8Q9UHE5 227 aa4.51□□□□□ -1.69
NSMCE2-213ENST00000523824 IGIPA6NJ69 53 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 PRSS47A8MTI9 375 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 SCO1O75880 301 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 ORMDL2Q53FV1 153 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 PAPPA-AS1Q5QFB9 102 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 Q8N8P6 123 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 COX7B2Q8TF08 81 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 PLEKHB2Q96CS7 222 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 LAMTOR2Q9Y2Q5 125 aa4.5□□□□□ -1.69
NSMCE2-213ENST00000523824 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
NSMCE2-213ENST00000523824 PDZD11Q5EBL8 140 aa4.49□□□□□ -1.69
NSMCE2-213ENST00000523824 CBLN2Q8IUK8 224 aa4.49□□□□□ -1.69
NSMCE2-213ENST00000523824 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
NSMCE2-213ENST00000523824 TMEM126AQ9H061 195 aa4.49□□□□□ -1.69
NSMCE2-213ENST00000523824 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
NSMCE2-213ENST00000523824 G0S2P27469 103 aa4.48□□□□□ -1.69
NSMCE2-213ENST00000523824 ATP5L2Q7Z4Y8 100 aa4.48□□□□□ -1.69
NSMCE2-213ENST00000523824 GNB1LQ9BYB4 327 aa4.48□□□□□ -1.69
NSMCE2-213ENST00000523824 K7EMI3 77 aa4.47□□□□□ -1.69
NSMCE2-213ENST00000523824 RPL24P83731 157 aaKnown RBP4.47□□□□□ -1.69
NSMCE2-213ENST00000523824 HIGD2AQ9BW72 106 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 302.6 ms