RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 PYGO1Q9Y3Y4 419 aa3.72□□□□□ -1.81
SPIDR-216ENST00000521918 UBR4Q5T4S7 5183 aa3.71□□□□□ -1.82
SPIDR-216ENST00000521918 COX7A2LO14548 114 aa3.71□□□□□ -1.82
SPIDR-216ENST00000521918 RPL37AP61513 92 aaKnown RBP3.71□□□□□ -1.82
SPIDR-216ENST00000521918 Q6ZRU5 148 aa3.71□□□□□ -1.82
SPIDR-216ENST00000521918 Q8N8P6 123 aa3.71□□□□□ -1.82
SPIDR-216ENST00000521918 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
SPIDR-216ENST00000521918 IGLV4-69A0A075B6H9 119 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 LINC01546A6NGU7 62 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 K7EMI3 77 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 SYCNQ0VAF6 134 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 FAM19A3Q7Z5A8 133 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 C5orf38Q86SI9 138 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 OR10D4PQ8NGN7 298 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 C2orf48Q96LS8 159 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 AMELXQ99217 191 aa3.7□□□□□ -1.82
SPIDR-216ENST00000521918 A0A087WZ39 114 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 IGIPA6NJ69 53 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.69□□□□□ -1.82
SPIDR-216ENST00000521918 RAB5AP20339 215 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 IFI27P40305 119 aaPredicted RBP3.69□□□□□ -1.82
SPIDR-216ENST00000521918 UBE2D1P51668 147 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 SPAG11BQ08648 103 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 KIAA0087Q14695 138 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 RHEBQ15382 184 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 ORMDL2Q53FV1 153 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 C2orf66Q6UXQ4 117 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 TMEM141Q96I45 108 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 GNB1LQ9BYB4 327 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 NXT2Q9NPJ8 142 aaKnown RBP3.69□□□□□ -1.82
SPIDR-216ENST00000521918 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
SPIDR-216ENST00000521918 CHTOPQ9Y3Y2 248 aaKnown RBP3.69□□□□□ -1.82
SPIDR-216ENST00000521918 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 OXTP01178 125 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
SPIDR-216ENST00000521918 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 ZC2HC1BQ5TFG8 222 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 STPG4Q8N801 248 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 CAMK2N2Q96S95 79 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 LINC00474Q9P2X8 69 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
SPIDR-216ENST00000521918 TGIF2-C20orf24A0A0A6YYL0 155 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 LOC107984640A0A0U1RRK4 108 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 APOMO95445 188 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 MT-ND6P03923 174 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 TLX1NBP0CAT3 122 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 TEX43Q6ZNM6 134 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 LINC01561Q8N1V8 128 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 YPEL4Q96NS1 127 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 TIMM17AQ99595 171 aa3.67□□□□□ -1.82
SPIDR-216ENST00000521918 MRPL35Q9NZE8 188 aaKnown RBP3.67□□□□□ -1.82
SPIDR-216ENST00000521918 A0A096LNJ9 63 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 A0A0J9YXV3 536 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 A0A1W2PNN7 141 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 S100PP25815 95 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 LRP2P98164 4655 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 COX19Q49B96 90 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 Q6ZRP5 223 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 C7orf33Q8WU49 177 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 RPS10P5Q9NQ39 176 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 C6orf48Q9UBA6 75 aa3.66□□□□□ -1.82
SPIDR-216ENST00000521918 NDUFA1O15239 70 aa3.65□□□□□ -1.83
SPIDR-216ENST00000521918 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
SPIDR-216ENST00000521918 SEC61GP60059 68 aa3.65□□□□□ -1.83
SPIDR-216ENST00000521918 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
SPIDR-216ENST00000521918 UNQ6190/PRO20217Q6UXQ8 127 aa3.65□□□□□ -1.83
SPIDR-216ENST00000521918 Q6ZN92 141 aa3.65□□□□□ -1.83
SPIDR-216ENST00000521918 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.83
SPIDR-216ENST00000521918 C2orf88Q9BSF0 95 aa3.65□□□□□ -1.83
SPIDR-216ENST00000521918 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 TRBV30A0A0K0K1B3 111 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 PCP4L1A6NKN8 68 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 APOC3P02656 99 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 MT3P25713 68 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 HERVK_113P63121 156 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 C9orf116Q5BN46 136 aaPredicted RBP3.64□□□□□ -1.83
SPIDR-216ENST00000521918 C2orf82Q6UX34 121 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 Q8IZM0 81 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 LINC00518Q8N0U6 118 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 SVBPQ8N300 66 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 C18orf32Q8TCD1 76 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 DPH3Q96FX2 82 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
SPIDR-216ENST00000521918 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 LINC01549A6NIU2 74 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 SMIM1B2RUZ4 78 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 SNAPINO95295 136 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 G0S2P27469 103 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 FABP9Q0Z7S8 132 aa3.63□□□□□ -1.83
SPIDR-216ENST00000521918 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
SPIDR-216ENST00000521918 C9orf129Q5T035 196 aaKnown RBP3.63□□□□□ -1.83
SPIDR-216ENST00000521918 PHF5AQ7RTV0 110 aaKnown RBP3.63□□□□□ -1.83
SPIDR-216ENST00000521918 KRTAP11-1Q8IUC1 163 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms