RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 KRTAP29-1A8MX34 341 aaPredicted RBP5.94□□□□□ -1.46
CLK4-209ENST00000521621 CHTF8P0CG12 524 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 UNQ6190/PRO20217Q6UXQ8 127 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 LINC00469Q8N7U9 141 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 STPG4Q8N801 248 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 COX7B2Q8TF08 81 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
CLK4-209ENST00000521621 OXTP01178 125 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 LINC00310P59036 64 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 IFI27L1Q96BM0 104 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 ZNF22P17026 224 aaPredicted RBP5.93□□□□□ -1.46
CLK4-209ENST00000521621 CKS1BP61024 79 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 C6orf226Q5I0X4 101 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 BAGE3Q86Y29 109 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
CLK4-209ENST00000521621 HSBP1O75506 76 aa5.92□□□□□ -1.46
CLK4-209ENST00000521621 HAMPP81172 84 aa5.92□□□□□ -1.46
CLK4-209ENST00000521621 COX17Q14061 63 aa5.92□□□□□ -1.46
CLK4-209ENST00000521621 COA6Q5JTJ3 125 aaKnown RBP5.92□□□□□ -1.46
CLK4-209ENST00000521621 Q6ZRP5 223 aa5.92□□□□□ -1.46
CLK4-209ENST00000521621 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
CLK4-209ENST00000521621 CHTOPQ9Y3Y2 248 aaKnown RBP5.91□□□□□ -1.46
CLK4-209ENST00000521621 C11orf86A6NJI1 115 aa5.91□□□□□ -1.46
CLK4-209ENST00000521621 PRR3P79522 188 aaKnown RBP5.91□□□□□ -1.46
CLK4-209ENST00000521621 HSPB8Q9UJY1 196 aa5.91□□□□□ -1.46
CLK4-209ENST00000521621 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
CLK4-209ENST00000521621 SERF1AO75920 110 aa5.9□□□□□ -1.46
CLK4-209ENST00000521621 S100A1P23297 94 aa5.9□□□□□ -1.46
CLK4-209ENST00000521621 FAT1Q14517 4588 aa5.9□□□□□ -1.46
CLK4-209ENST00000521621 IGKV2-24A0A0C4DH68 120 aa5.9□□□□□ -1.47
CLK4-209ENST00000521621 GAGE2BQ13066 116 aa5.9□□□□□ -1.47
CLK4-209ENST00000521621 PMCHL1Q16048 86 aa5.9□□□□□ -1.47
CLK4-209ENST00000521621 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
CLK4-209ENST00000521621 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
CLK4-209ENST00000521621 RPL18AQ02543 176 aaKnown RBP5.89□□□□□ -1.47
CLK4-209ENST00000521621 LEPROTL1O95214 131 aa5.89□□□□□ -1.47
CLK4-209ENST00000521621 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
CLK4-209ENST00000521621 C2orf82Q6UX34 121 aa5.89□□□□□ -1.47
CLK4-209ENST00000521621 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BKO60814 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BJP06899 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 SPINK8P0C7L1 97 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BOP23527 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 PLNP26678 52 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BBP33778 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BDP58876 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BCP62807 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST2H2BEQ16778 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.88□□□□□ -1.47
CLK4-209ENST00000521621 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BHQ93079 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BNQ99877 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 HIST1H2BMQ99879 126 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 SRSF9Q13242 221 aaKnown RBP eCLIP5.88□□□□□ -1.47
CLK4-209ENST00000521621 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
CLK4-209ENST00000521621 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
CLK4-209ENST00000521621 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
CLK4-209ENST00000521621 TOMM7Q9P0U1 55 aa5.87□□□□□ -1.47
CLK4-209ENST00000521621 HERV-K104P63124 156 aa5.86□□□□□ -1.47
CLK4-209ENST00000521621 FAM19A2Q8N3H0 131 aa5.86□□□□□ -1.47
CLK4-209ENST00000521621 LINC00587B1AMM8 73 aa5.86□□□□□ -1.47
CLK4-209ENST00000521621 NUPR1O60356 82 aa5.86□□□□□ -1.47
CLK4-209ENST00000521621 NDUFA6P56556 154 aa5.86□□□□□ -1.47
CLK4-209ENST00000521621 LBHQ53QV2 105 aaPredicted RBP5.86□□□□□ -1.47
CLK4-209ENST00000521621 AKR1D1P51857 326 aa5.85□□□□□ -1.47
CLK4-209ENST00000521621 NMUP48645 174 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 HNRNPA3P51991 378 aaKnown RBP5.84□□□□□ -1.47
CLK4-209ENST00000521621 TMEM170BQ5T4T1 132 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 MAP1LC3CQ9BXW4 147 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 LOC107984156A0A0G2JMH3 177 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 SCO1O75880 301 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 ARL17AQ8IVW1 177 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 ERG28Q9UKR5 140 aa5.84□□□□□ -1.47
CLK4-209ENST00000521621 LEPROTO15243 131 aa5.84□□□□□ -1.48
CLK4-209ENST00000521621 DPM2O94777 84 aa5.84□□□□□ -1.48
CLK4-209ENST00000521621 PLEKHB2Q96CS7 222 aa5.84□□□□□ -1.48
CLK4-209ENST00000521621 GAGE2EQ4V326 116 aa5.83□□□□□ -1.48
CLK4-209ENST00000521621 PET117Q6UWS5 81 aa5.83□□□□□ -1.48
CLK4-209ENST00000521621 GAGE2DQ9UEU5 116 aa5.83□□□□□ -1.48
CLK4-209ENST00000521621 M0QXV9 152 aa5.83□□□□□ -1.48
CLK4-209ENST00000521621 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
CLK4-209ENST00000521621 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
CLK4-209ENST00000521621 FAM168BA1KXE4 195 aa5.82□□□□□ -1.48
CLK4-209ENST00000521621 IGKCP01834 107 aa5.82□□□□□ -1.48
CLK4-209ENST00000521621 LINC01545Q5VT33 79 aa5.82□□□□□ -1.48
CLK4-209ENST00000521621 SYS1-DBNDD2H3BUS1 97 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 HERVK_113P61574 105 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 C22orf24Q9Y442 160 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 SERTAD4-AS1Q5TG53 156 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 REG3GQ6UW15 175 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 LINC01600Q96MT4 127 aa5.81□□□□□ -1.48
CLK4-209ENST00000521621 SRRM2Q9UQ35 2752 aaKnown RBP5.81□□□□□ -1.48
CLK4-209ENST00000521621 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
CLK4-209ENST00000521621 FAM19A5Q7Z5A7 132 aaPredicted RBP5.8□□□□□ -1.48
CLK4-209ENST00000521621 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
CLK4-209ENST00000521621 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
CLK4-209ENST00000521621 SND1-IT1Q9HBX3 110 aa5.8□□□□□ -1.48
CLK4-209ENST00000521621 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms