RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 C1QTNF4Q9BXJ3 329 aa3.09□□□□□ -1.91
PABPC1-212ENST00000519622 CBY1Q9Y3M2 126 aa3.09□□□□□ -1.91
PABPC1-212ENST00000519622 IGKV2-28A0A075B6P5 120 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 TRBV6-8A0A0A6YYG3 113 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 TRBV30A0A0K0K1B3 111 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 CIDEAO60543 219 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 IGKV2D-28P01615 120 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 ANKRD29Q8N6D5 301 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 Q9H8V8 135 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 CELA1Q9UNI1 258 aa3.08□□□□□ -1.92
PABPC1-212ENST00000519622 HIVEP2P31629 2446 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.07□□□□□ -1.92
PABPC1-212ENST00000519622 TRAV13-1A0A0B4J241 112 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 LST1O00453 97 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 IFITM1P13164 125 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 PSMB2P49721 201 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 RPL24P83731 157 aaKnown RBP3.07□□□□□ -1.92
PABPC1-212ENST00000519622 GAGE6Q13070 117 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 SCGB2A2Q13296 93 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 LINC01620Q4KN68 170 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 TEN1Q86WV5 123 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 WFDC9Q8NEX5 89 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 GEMIN7Q9H840 131 aaKnown RBP3.07□□□□□ -1.92
PABPC1-212ENST00000519622 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
PABPC1-212ENST00000519622 DYNC2H1Q8NCM8 4307 aaKnown RBP3.07□□□□□ -1.92
PABPC1-212ENST00000519622 TRBV20-1A0A075B6N2 111 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 TRGV2A0A075B6R0 118 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 A0A087WZ39 114 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 LOC107984156A0A0G2JMH3 177 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 LINC00959A0A1B0GUT2 108 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 A0A1B0GUV1 79 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 RPL13AP40429 203 aaKnown RBP3.06□□□□□ -1.92
PABPC1-212ENST00000519622 NPC2P61916 151 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 KIAA0087Q14695 138 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 C9orf66Q5T8R8 295 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 FAM222AQ5U5X8 452 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 ARL17AQ8IVW1 177 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 Q8NDZ9 215 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 CLEC2BQ92478 149 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 FAM218AQ96MZ4 157 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 VPS25Q9BRG1 176 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 ERG28Q9UKR5 140 aa3.06□□□□□ -1.92
PABPC1-212ENST00000519622 NOTCH2Q04721 2471 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 HUWE1Q7Z6Z7 4374 aaKnown RBP3.05□□□□□ -1.92
PABPC1-212ENST00000519622 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 TRGV4A0A0C4DH28 118 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 TRBV10-2A0A0K0K1G8 114 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 SMIM9A6NGZ8 99 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 LYRM9A8MSI8 78 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 SLC25A20O43772 301 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 XGP55808 180 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 DEFB135Q30KP9 77 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 DEFB121Q5J5C9 76 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 LINC00337Q8N6G1 96 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 COX7B2Q8TF08 81 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 PPDPFLQ8WWR9 84 aa3.05□□□□□ -1.92
PABPC1-212ENST00000519622 TEP1Q99973 2627 aaKnown RBP3.05□□□□□ -1.92
PABPC1-212ENST00000519622 NBEAL2Q6ZNJ1 2754 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 CYSRT1A8MQ03 144 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 C9JAW5 83 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 H7C2G1 150 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 DEFB4AO15263 64 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 DEFB130BP0DP73 79 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 DEFB130AP0DP74 79 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 CCL18P55774 89 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 HERV-K104P63124 156 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 LINC01561Q8N1V8 128 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 SIGMAR1Q99720 223 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 PRO0255Q9UI72 69 aa3.04□□□□□ -1.92
PABPC1-212ENST00000519622 TRAV26-1A0A087WT03 109 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 A0A096LPF7 62 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 A0A0U1RRA0 63 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 H3BT86 120 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 COX7A2LO14548 114 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 MT-ATP8P03928 68 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 KRTAP24-1Q3LI83 254 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 LYRM7Q5U5X0 104 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 MIR7-3HGQ8N6C7 128 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 CHCHD5Q9BSY4 110 aa3.03□□□□□ -1.92
PABPC1-212ENST00000519622 FBN1P35555 2871 aaKnown RBP3.03□□□□□ -1.92
PABPC1-212ENST00000519622 ATRQ13535 2644 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 TRAV8-4A0A0B4J246 113 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 TEX49A0A1B0GTD5 131 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 IBA57-AS1B1ANH7 110 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 SCGB1A1P11684 91 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 RPL28P46779 137 aaKnown RBP3.02□□□□□ -1.93
PABPC1-212ENST00000519622 EGFEM1PQ0D2K5 195 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 SS18Q15532 418 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 ATXN8Q156A1 80 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 C9orf129Q5T035 196 aaKnown RBP3.02□□□□□ -1.93
PABPC1-212ENST00000519622 CLPSL2Q6UWE3 100 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 SDIM1Q6ZPB5 146 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 Q8IZM0 81 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 RETNQ9HD89 108 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 PRR34Q9NV39 138 aa3.02□□□□□ -1.93
PABPC1-212ENST00000519622 IGKV3OR2-268A0A0C4DH90 116 aa3.01□□□□□ -1.93
PABPC1-212ENST00000519622 UBE2L6O14933 153 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms