RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZFYVE26Q68DK2 2539 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 LINC00959A0A1B0GUT2 108 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 A0A1B0GWA3 101 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 C7orf77A4D0Y5 90 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 UQCRHP07919 91 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 COX6A2Q02221 97 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 PMCHL1Q16048 86 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 PYY3Q5JQD4 70 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 PSMG4Q5JS54 123 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 V9GYS6 101 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 USF3Q68DE3 2245 aa0.3□□□□□ -2.36
SQLE-202ENST00000518604 RGPD3A6NKT7 1758 aaPredicted RBP0.29□□□□□ -2.36
SQLE-202ENST00000518604 IQSEC2Q5JU85 1478 aa0.29□□□□□ -2.36
SQLE-202ENST00000518604 TMEM131LA2VDJ0 1609 aa0.29□□□□□ -2.36
SQLE-202ENST00000518604 SPINK6Q6UWN8 80 aa0.29□□□□□ -2.36
SQLE-202ENST00000518604 PRO1933Q9H354 126 aa0.29□□□□□ -2.36
SQLE-202ENST00000518604 PSENENQ9NZ42 101 aa0.29□□□□□ -2.36
SQLE-202ENST00000518604 PPLO60437 1756 aa0.29□□□□□ -2.36
SQLE-202ENST00000518604 EDC4Q6P2E9 1401 aaKnown RBP0.29□□□□□ -2.36
SQLE-202ENST00000518604 MYH4Q9Y623 1939 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 SCRIBQ14160 1630 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 C5P01031 1676 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 A0A0G2JMZ2 1700 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 UQCRHLA0A096LP55 91 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 TRBV6-1A0A0K0K1D8 114 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 F8WEM9 126 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 K7EP34 96 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 GYPAP02724 150 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 ARMS2P0C7Q2 107 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 TDRG1Q3Y452 100 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 DEFB123Q8N688 67 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 PRO0255Q9UI72 69 aa0.28□□□□□ -2.36
SQLE-202ENST00000518604 SPTBN1Q01082 2364 aaKnown RBP0.28□□□□□ -2.36
SQLE-202ENST00000518604 CHD6Q8TD26 2715 aa0.28□□□□□ -2.37
SQLE-202ENST00000518604 NEXMIFQ5QGS0 1516 aa0.28□□□□□ -2.37
SQLE-202ENST00000518604 ABCC2Q92887 1545 aa0.28□□□□□ -2.37
SQLE-202ENST00000518604 KIAA0556O60303 1618 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 ALKQ9UM73 1620 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 DEFB107AQ8IZN7 70 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 URB1O60287 2271 aaKnown RBP0.27□□□□□ -2.37
SQLE-202ENST00000518604 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
SQLE-202ENST00000518604 IGF2RP11717 2491 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 CUX1P39880 1505 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 SAMD9Q5K651 1589 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 DIP2BQ9P265 1576 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 KIF14Q15058 1648 aa0.27□□□□□ -2.37
SQLE-202ENST00000518604 AKAP6Q13023 2319 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 A0A0D9SFI3 127 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 PVALEFA0A1B0GWK0 134 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 ETDBQ3ZM63 59 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 Q9H521 79 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 SPCS1Q9Y6A9 102 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 ANKRD36A6QL64 1941 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 OTOGQ6ZRI0 2925 aa0.26□□□□□ -2.37
SQLE-202ENST00000518604 FAT2Q9NYQ8 4349 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 MAP3K4Q9Y6R4 1608 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 TRBV7-4A0A0J9YYF1 115 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 H0Y9P7 68 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 C6orf201Q7Z4U5 140 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 Q8IZM0 81 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 CELSR1Q9NYQ6 3014 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 NCOR1O75376 2440 aa0.25□□□□□ -2.37
SQLE-202ENST00000518604 TNXBP22105 4242 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 RGPD1P0DJD0 1748 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 ZNF831Q5JPB2 1677 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 MAGI2Q86UL8 1455 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 ARHGAP35Q9NRY4 1499 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 BSNQ9UPA5 3926 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 H3BQF6 201 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 K7EQZ3 153 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 HMGN2P05204 90 aaKnown RBP0.24□□□□□ -2.37
SQLE-202ENST00000518604 UBE2D4Q9Y2X8 147 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 UNC79Q9P2D8 2635 aa0.24□□□□□ -2.37
SQLE-202ENST00000518604 HUWE1Q7Z6Z7 4374 aaKnown RBP0.24□□□□□ -2.37
SQLE-202ENST00000518604 PPRC1Q5VV67 1664 aaKnown RBP0.24□□□□□ -2.37
SQLE-202ENST00000518604 PRKDCP78527 4128 aaKnown RBP0.23□□□□□ -2.37
SQLE-202ENST00000518604 VWFP04275 2813 aa0.23□□□□□ -2.37
SQLE-202ENST00000518604 KMT2AQ03164 3969 aa0.23□□□□□ -2.37
SQLE-202ENST00000518604 PLIN4Q96Q06 1357 aa0.23□□□□□ -2.37
SQLE-202ENST00000518604 A0A1B0GU69 56 aa0.23□□□□□ -2.37
SQLE-202ENST00000518604 HMGN3Q15651 99 aa0.23□□□□□ -2.37
SQLE-202ENST00000518604 S100A16Q96FQ6 103 aaKnown RBP0.23□□□□□ -2.37
SQLE-202ENST00000518604 MAST4O15021 2626 aa0.23□□□□□ -2.37
SQLE-202ENST00000518604 ATP7BP35670 1465 aa0.22□□□□□ -2.37
SQLE-202ENST00000518604 REV3LO60673 3130 aa0.22□□□□□ -2.37
SQLE-202ENST00000518604 CYB5AP00167 134 aa0.22□□□□□ -2.37
SQLE-202ENST00000518604 Q5VSD8 79 aa0.22□□□□□ -2.37
SQLE-202ENST00000518604 ZNF720Q7Z2F6 126 aa0.22□□□□□ -2.37
SQLE-202ENST00000518604 USP32Q8NFA0 1604 aa0.22□□□□□ -2.37
SQLE-202ENST00000518604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.22□□□□□ -2.373e-9■■■■■ 31.9
SQLE-202ENST00000518604 LRRC37AA6NMS7 1700 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 PKD1L3Q7Z443 1732 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 FMN2Q9NZ56 1722 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 PKDREJQ9NTG1 2253 aa0.21□□□□□ -2.38
SQLE-202ENST00000518604 UBR5O95071 2799 aaPredicted RBP0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms