RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 EGFEM1PQ0D2K5 195 aa12.89□□□□□ -0.35
SDC2-202ENST00000518385 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
SDC2-202ENST00000518385 CRPP02741 224 aa12.87□□□□□ -0.35
SDC2-202ENST00000518385 LINC00612Q8N6U2 182 aa12.87□□□□□ -0.35
SDC2-202ENST00000518385 Q9UF83 564 aa12.87□□□□□ -0.35
SDC2-202ENST00000518385 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
SDC2-202ENST00000518385 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
SDC2-202ENST00000518385 CMYA5Q8N3K9 4069 aa12.86□□□□□ -0.35
SDC2-202ENST00000518385 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
SDC2-202ENST00000518385 UBE2L6O14933 153 aa12.85□□□□□ -0.35
SDC2-202ENST00000518385 C5orf38Q86SI9 138 aa12.85□□□□□ -0.35
SDC2-202ENST00000518385 X6R8D5 127 aa12.85□□□□□ -0.35
SDC2-202ENST00000518385 TRGV4A0A0C4DH28 118 aa12.84□□□□□ -0.35
SDC2-202ENST00000518385 UQCRQO14949 82 aa12.84□□□□□ -0.35
SDC2-202ENST00000518385 ANK2Q01484 3957 aa12.84□□□□□ -0.35
SDC2-202ENST00000518385 MALP21145 153 aa12.83□□□□□ -0.36
SDC2-202ENST00000518385 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
SDC2-202ENST00000518385 FAM236AA0A1B0GUQ0 79 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 FAM236BA0A1B0GV22 79 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 FHL2Q14192 279 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 C3orf22Q8N5N4 141 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 TRAV13-1A0A0B4J241 112 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 IBA57-AS1B1ANH7 110 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 NTM-AS1Q6ZSK4 140 aa12.81□□□□□ -0.36
SDC2-202ENST00000518385 DNAL4O96015 105 aa12.8□□□□□ -0.36
SDC2-202ENST00000518385 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
SDC2-202ENST00000518385 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
SDC2-202ENST00000518385 LINC00526Q96FQ7 95 aa12.79□□□□□ -0.36
SDC2-202ENST00000518385 CHCHD5Q9BSY4 110 aa12.79□□□□□ -0.36
SDC2-202ENST00000518385 ATOX1O00244 68 aa12.78□□□□□ -0.36
SDC2-202ENST00000518385 A0A1B0GX51 115 aa12.77□□□□□ -0.36
SDC2-202ENST00000518385 MIFP14174 115 aa12.77□□□□□ -0.36
SDC2-202ENST00000518385 LINC01561Q8N1V8 128 aa12.77□□□□□ -0.36
SDC2-202ENST00000518385 OBSCN-AS1Q96MR7 158 aa12.77□□□□□ -0.36
SDC2-202ENST00000518385 PKD1L1Q8TDX9 2849 aa12.77□□□□□ -0.36
SDC2-202ENST00000518385 SND1-IT1Q9HBX3 110 aa12.77□□□□□ -0.37
SDC2-202ENST00000518385 HIST1H4AP62805 103 aaKnown RBP12.76□□□□□ -0.37
SDC2-202ENST00000518385 SMCR5Q8TEV8 140 aa12.76□□□□□ -0.37
SDC2-202ENST00000518385 C22orf24Q9Y442 160 aa12.76□□□□□ -0.37
SDC2-202ENST00000518385 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
SDC2-202ENST00000518385 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
SDC2-202ENST00000518385 Q6JHZ5 121 aa12.75□□□□□ -0.37
SDC2-202ENST00000518385 DEFB135Q30KP9 77 aa12.74□□□□□ -0.37
SDC2-202ENST00000518385 C9orf153Q5TBE3 101 aa12.74□□□□□ -0.37
SDC2-202ENST00000518385 MIR7-3HGQ8N6C7 128 aa12.74□□□□□ -0.37
SDC2-202ENST00000518385 COX7CP15954 63 aa12.73□□□□□ -0.37
SDC2-202ENST00000518385 FAM218AQ96MZ4 157 aa12.73□□□□□ -0.37
SDC2-202ENST00000518385 PRO0255Q9UI72 69 aa12.73□□□□□ -0.37
SDC2-202ENST00000518385 S100A7L2Q5SY68 101 aa12.73□□□□□ -0.37
SDC2-202ENST00000518385 SMIM20Q8N5G0 67 aa12.73□□□□□ -0.37
SDC2-202ENST00000518385 A0A087WZ39 114 aa12.72□□□□□ -0.37
SDC2-202ENST00000518385 A0A0U1RRA0 63 aa12.72□□□□□ -0.37
SDC2-202ENST00000518385 KPRPQ5T749 579 aaPredicted RBP12.71□□□□□ -0.37
SDC2-202ENST00000518385 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.37
SDC2-202ENST00000518385 LINC00337Q8N6G1 96 aa12.71□□□□□ -0.37
SDC2-202ENST00000518385 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
SDC2-202ENST00000518385 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
SDC2-202ENST00000518385 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
SDC2-202ENST00000518385 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
SDC2-202ENST00000518385 CRYGAP11844 174 aa12.7□□□□□ -0.38
SDC2-202ENST00000518385 KLK5Q9Y337 293 aaPredicted RBP12.7□□□□□ -0.38
SDC2-202ENST00000518385 DNAH3Q8TD57 4116 aa12.7□□□□□ -0.38
SDC2-202ENST00000518385 IGHV3OR16-9A0A0B4J2B5 98 aa12.69□□□□□ -0.38
SDC2-202ENST00000518385 LOC100131303A0A0U1RQF7 123 aa12.69□□□□□ -0.38
SDC2-202ENST00000518385 LINC00158P58513 81 aa12.69□□□□□ -0.38
SDC2-202ENST00000518385 KRTAP21-3Q3LHN1 58 aa12.69□□□□□ -0.38
SDC2-202ENST00000518385 Q8NAQ8 132 aa12.69□□□□□ -0.38
SDC2-202ENST00000518385 SMIM11BQ8TCY0 68 aa12.69□□□□□ -0.38
SDC2-202ENST00000518385 SPART-AS1P0CW21 52 aa12.68□□□□□ -0.38
SDC2-202ENST00000518385 CCL18P55774 89 aa12.68□□□□□ -0.38
SDC2-202ENST00000518385 ATP5EP2Q5VTU8 51 aa12.68□□□□□ -0.38
SDC2-202ENST00000518385 DAD1P61803 113 aa12.67□□□□□ -0.38
SDC2-202ENST00000518385 LINC00167Q96N53 147 aa12.67□□□□□ -0.38
SDC2-202ENST00000518385 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
SDC2-202ENST00000518385 GYPEP15421 78 aa12.66□□□□□ -0.38
SDC2-202ENST00000518385 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
SDC2-202ENST00000518385 RPS28P62857 69 aaKnown RBP12.65□□□□□ -0.38
SDC2-202ENST00000518385 ORMDL1Q9P0S3 153 aa12.65□□□□□ -0.38
SDC2-202ENST00000518385 PAX4O43316 350 aa12.64□□□□□ -0.39
SDC2-202ENST00000518385 Q8IZM0 81 aa12.64□□□□□ -0.39
SDC2-202ENST00000518385 MUC7Q8TAX7 377 aa12.64□□□□□ -0.39
SDC2-202ENST00000518385 NDUFC2O95298 119 aa12.63□□□□□ -0.39
SDC2-202ENST00000518385 PRB2P02812 416 aaPredicted RBP12.63□□□□□ -0.39
SDC2-202ENST00000518385 Q9HAA7 133 aa12.63□□□□□ -0.39
SDC2-202ENST00000518385 TOMM7Q9P0U1 55 aa12.63□□□□□ -0.39
SDC2-202ENST00000518385 A0A1B0GUV1 79 aa12.62□□□□□ -0.39
SDC2-202ENST00000518385 K7EIL1 84 aa12.62□□□□□ -0.39
SDC2-202ENST00000518385 C2orf48Q96LS8 159 aa12.62□□□□□ -0.39
SDC2-202ENST00000518385 A0A087WYN8 130 aa12.61□□□□□ -0.39
SDC2-202ENST00000518385 COX17Q14061 63 aa12.61□□□□□ -0.39
SDC2-202ENST00000518385 J3KT08 172 aa12.6□□□□□ -0.39
SDC2-202ENST00000518385 SS18Q15532 418 aa12.6□□□□□ -0.39
SDC2-202ENST00000518385 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
SDC2-202ENST00000518385 H3BQ85 93 aa12.6□□□□□ -0.39
SDC2-202ENST00000518385 CCKP06307 115 aa12.6□□□□□ -0.39
SDC2-202ENST00000518385 MGAM2Q2M2H8 2515 aa12.59□□□□□ -0.39
SDC2-202ENST00000518385 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
SDC2-202ENST00000518385 LECT2O14960 151 aa12.59□□□□□ -0.39
SDC2-202ENST00000518385 SERP2Q8N6R1 65 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms