RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ARL2-SNX15V9GYD0 113 aa-2.48□□□□□ -2.81
RNU6-1088P-201ENST00000516850 PDCD11Q14690 1871 aaKnown RBP-2.48□□□□□ -2.81
RNU6-1088P-201ENST00000516850 LCN9Q8WX39 176 aa-2.49□□□□□ -2.81
RNU6-1088P-201ENST00000516850 SERP1Q9Y6X1 66 aa-2.49□□□□□ -2.81
RNU6-1088P-201ENST00000516850 ACACAQ13085 2346 aa-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 CPSF1Q10570 1443 aaKnown RBP-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 SMG6Q86US8 1419 aaKnown RBP-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 MYOZ3Q8TDC0 251 aa-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 LSM10Q969L4 123 aaKnown RBP-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 PPP3R2Q96LZ3 170 aa-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 COPZ2Q9P299 210 aa-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 SCN7AQ01118 1682 aa-2.5□□□□□ -2.81
RNU6-1088P-201ENST00000516850 GRIN2AQ12879 1464 aa-2.51□□□□□ -2.81
RNU6-1088P-201ENST00000516850 DMXL1Q9Y485 3027 aa-2.51□□□□□ -2.81
RNU6-1088P-201ENST00000516850 RERGLQ9H628 205 aa-2.51□□□□□ -2.81
RNU6-1088P-201ENST00000516850 SHROOM2Q13796 1616 aa-2.51□□□□□ -2.81
RNU6-1088P-201ENST00000516850 LOC100130705A0A1B0GUX0 176 aa-2.52□□□□□ -2.81
RNU6-1088P-201ENST00000516850 SPANXDQ9BXN6 97 aa-2.52□□□□□ -2.81
RNU6-1088P-201ENST00000516850 ANKRD11Q6UB99 2663 aaPredicted RBP-2.52□□□□□ -2.81
RNU6-1088P-201ENST00000516850 PLECQ15149 4684 aaKnown RBP-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 TRAV30A0A087WSZ9 112 aa-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 HEPN1Q6WQI6 88 aa-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 CDC42SE2Q9NRR3 84 aa-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 ANKRD36A6QL64 1941 aa-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 NIPBLQ6KC79 2804 aaeCLIP-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 PLEKHH2Q8IVE3 1493 aa-2.53□□□□□ -2.81
RNU6-1088P-201ENST00000516850 RYR2Q92736 4967 aa-2.53□□□□□ -2.82
RNU6-1088P-201ENST00000516850 DNAH11Q96DT5 4516 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 REV3LO60673 3130 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 ANK3Q12955 4377 aaKnown RBP-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 A0A1B0GWA3 101 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 ARL11Q969Q4 196 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 NLRP1Q9C000 1473 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 EHBP1L1Q8N3D4 1523 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 KIAA1551Q9HCM1 1747 aa-2.54□□□□□ -2.82
RNU6-1088P-201ENST00000516850 CCL22O00626 93 aa-2.55□□□□□ -2.82
RNU6-1088P-201ENST00000516850 PFDN5Q99471 154 aa-2.55□□□□□ -2.82
RNU6-1088P-201ENST00000516850 APOBP04114 4563 aaKnown RBP-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 CICQ96RK0 1608 aaPredicted RBP-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 A0A1B0GU69 56 aa-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 C9orf153Q5TBE3 101 aa-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 COMMD6Q7Z4G1 85 aa-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 RNF213Q63HN8 5207 aa-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 TRANK1O15050 2925 aa-2.56□□□□□ -2.82
RNU6-1088P-201ENST00000516850 C8orf59Q8N0T1 100 aaPredicted RBP-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 PYDC1Q8WXC3 89 aa-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 MRPL34Q9BQ48 92 aaKnown RBP-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 SNRNP25Q9BV90 132 aaKnown RBP-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 CDKN2A-AS1Q9UH64 79 aa-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 LRRC37AA6NMS7 1700 aa-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 CEP152O94986 1710 aa-2.57□□□□□ -2.82
RNU6-1088P-201ENST00000516850 MIF4GDA9UHW6 222 aaKnown RBP-2.58□□□□□ -2.82
RNU6-1088P-201ENST00000516850 PHLPP1O60346 1717 aa-2.59□□□□□ -2.82
RNU6-1088P-201ENST00000516850 SNCAP37840 140 aa-2.59□□□□□ -2.82
RNU6-1088P-201ENST00000516850 ADGRL2O95490 1459 aa-2.59□□□□□ -2.82
RNU6-1088P-201ENST00000516850 C9orf92A6NGG3 77 aa-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 ARPC4P59998 168 aa-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 C5orf38Q86SI9 138 aa-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 WFDC13Q8IUB5 93 aa-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 ANP32BQ92688 251 aaKnown RBP-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 RGPD2P0DJD1 1756 aa-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 EDC4Q6P2E9 1401 aaKnown RBP-2.6□□□□□ -2.83
RNU6-1088P-201ENST00000516850 KALRNO60229 2985 aa-2.61□□□□□ -2.83
RNU6-1088P-201ENST00000516850 SMIM21Q3B7S5 101 aa-2.61□□□□□ -2.83
RNU6-1088P-201ENST00000516850 Q56UQ5 140 aa-2.61□□□□□ -2.83
RNU6-1088P-201ENST00000516850 LINC00474Q9P2X8 69 aa-2.61□□□□□ -2.83
RNU6-1088P-201ENST00000516850 PDE4DIPQ5VU43 2346 aa-2.61□□□□□ -2.83
RNU6-1088P-201ENST00000516850 ANKRD50Q9ULJ7 1429 aa-2.61□□□□□ -2.83
RNU6-1088P-201ENST00000516850 LAMA3Q16787 3333 aa-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 FAM223BA6NKX1 122 aa-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 SAA2P0DJI9 122 aaPredicted RBP-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 DR1Q01658 176 aa-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 MGAM2Q2M2H8 2515 aa-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 BCORQ6W2J9 1755 aa-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 DIP2CQ9Y2E4 1556 aa-2.62□□□□□ -2.83
RNU6-1088P-201ENST00000516850 ROBO1Q9Y6N7 1651 aa-2.63□□□□□ -2.83
RNU6-1088P-201ENST00000516850 TRAPPC2P0DI81 140 aa-2.63□□□□□ -2.83
RNU6-1088P-201ENST00000516850 TRAPPC2BP0DI82 140 aa-2.63□□□□□ -2.83
RNU6-1088P-201ENST00000516850 DEFA5Q01523 94 aa-2.63□□□□□ -2.83
RNU6-1088P-201ENST00000516850 CATR1Q13166 79 aa-2.63□□□□□ -2.83
RNU6-1088P-201ENST00000516850 HIGD1BQ9P298 99 aa-2.63□□□□□ -2.83
RNU6-1088P-201ENST00000516850 LELP1Q5T871 98 aa-2.64□□□□□ -2.83
RNU6-1088P-201ENST00000516850 LINC00846Q9NV44 126 aa-2.64□□□□□ -2.83
RNU6-1088P-201ENST00000516850 DNHD1Q96M86 4753 aa-2.64□□□□□ -2.83
RNU6-1088P-201ENST00000516850 TOP2BQ02880 1626 aa-2.64□□□□□ -2.83
RNU6-1088P-201ENST00000516850 NCOA3Q9Y6Q9 1424 aa-2.65□□□□□ -2.83
RNU6-1088P-201ENST00000516850 APOC2P02655 101 aa-2.65□□□□□ -2.83
RNU6-1088P-201ENST00000516850 COX6CP09669 75 aa-2.65□□□□□ -2.83
RNU6-1088P-201ENST00000516850 C6orf201Q7Z4U5 140 aa-2.65□□□□□ -2.83
RNU6-1088P-201ENST00000516850 DNAH1Q9P2D7 4330 aa-2.65□□□□□ -2.83
RNU6-1088P-201ENST00000516850 PKD1L2Q7Z442 2459 aa-2.66□□□□□ -2.83
RNU6-1088P-201ENST00000516850 MEIG1Q5JSS6 88 aa-2.66□□□□□ -2.84
RNU6-1088P-201ENST00000516850 MANBALQ9NQG1 85 aa-2.66□□□□□ -2.84
RNU6-1088P-201ENST00000516850 FAM25AB3EWG3 89 aa-2.67□□□□□ -2.84
RNU6-1088P-201ENST00000516850 FAM25CB3EWG5 89 aa-2.67□□□□□ -2.84
RNU6-1088P-201ENST00000516850 FAM25GB3EWG6 89 aa-2.67□□□□□ -2.84
RNU6-1088P-201ENST00000516850 F6UZH7 168 aa-2.67□□□□□ -2.84
RNU6-1088P-201ENST00000516850 SFTA2Q6UW10 78 aa-2.67□□□□□ -2.84
RNU6-1088P-201ENST00000516850 A0A0C4DFX4 3053 aa-2.67□□□□□ -2.84
RNU6-1088P-201ENST00000516850 MTORP42345 2549 aa-2.67□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms