RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HLA-DRB4X5D2U9 266 aa-5.35□□□□□ -3.27
RNU6-539P-201ENST00000516665 PLXNC1O60486 1568 aa-5.35□□□□□ -3.27
RNU6-539P-201ENST00000516665 ZNF831Q5JPB2 1677 aa-5.35□□□□□ -3.27
RNU6-539P-201ENST00000516665 PBRM1Q86U86 1689 aa-5.35□□□□□ -3.27
RNU6-539P-201ENST00000516665 IFT140Q96RY7 1462 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 MAP3K5Q99683 1374 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 TRAV13-2A0A0B4J235 113 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 E7EQ34 232 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 MRPL54Q6P161 138 aaKnown RBP-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 C6orf201Q7Z4U5 140 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 LINC00846Q9NV44 126 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 LAMTOR2Q9Y2Q5 125 aa-5.36□□□□□ -3.27
RNU6-539P-201ENST00000516665 MYOM1P52179 1685 aa-5.37□□□□□ -3.27
RNU6-539P-201ENST00000516665 FRYLO94915 3013 aa-5.37□□□□□ -3.27
RNU6-539P-201ENST00000516665 MGST2Q99735 147 aa-5.37□□□□□ -3.27
RNU6-539P-201ENST00000516665 TRAPPC2LQ9UL33 140 aa-5.37□□□□□ -3.27
RNU6-539P-201ENST00000516665 FAM9CQ8IZT9 166 aa-5.38□□□□□ -3.27
RNU6-539P-201ENST00000516665 MAPKBP1O60336 1514 aa-5.38□□□□□ -3.27
RNU6-539P-201ENST00000516665 LINC01546A6NGU7 62 aa-5.39□□□□□ -3.27
RNU6-539P-201ENST00000516665 WHAMMP3Q1A5X7 153 aa-5.39□□□□□ -3.27
RNU6-539P-201ENST00000516665 SIKE1Q9BRV8 207 aa-5.39□□□□□ -3.27
RNU6-539P-201ENST00000516665 MED31Q9Y3C7 131 aa-5.39□□□□□ -3.27
RNU6-539P-201ENST00000516665 TSLPQ969D9 159 aa-5.4□□□□□ -3.27
RNU6-539P-201ENST00000516665 ARMC1Q9NVT9 282 aa-5.4□□□□□ -3.27
RNU6-539P-201ENST00000516665 PCNTO95613 3336 aa-5.4□□□□□ -3.27
RNU6-539P-201ENST00000516665 PREX1Q8TCU6 1659 aa-5.4□□□□□ -3.27
RNU6-539P-201ENST00000516665 IL5P05113 134 aa-5.41□□□□□ -3.28
RNU6-539P-201ENST00000516665 CEBPGP53567 150 aa-5.41□□□□□ -3.28
RNU6-539P-201ENST00000516665 LSM6P62312 80 aaKnown RBP-5.41□□□□□ -3.28
RNU6-539P-201ENST00000516665 MUC3AQ02505 3323 aa-5.41□□□□□ -3.28
RNU6-539P-201ENST00000516665 NUP188Q5SRE5 1749 aa-5.42□□□□□ -3.28
RNU6-539P-201ENST00000516665 TRBV7-7A0A0K0K1E9 115 aa-5.42□□□□□ -3.28
RNU6-539P-201ENST00000516665 LOC285095A0A1B0GVY8 99 aa-5.42□□□□□ -3.28
RNU6-539P-201ENST00000516665 TMEM191AQ9H0A3 160 aa-5.42□□□□□ -3.28
RNU6-539P-201ENST00000516665 BANF2Q9H503 90 aa-5.42□□□□□ -3.28
RNU6-539P-201ENST00000516665 PSENENQ9NZ42 101 aa-5.42□□□□□ -3.28
RNU6-539P-201ENST00000516665 ATP7BP35670 1465 aa-5.43□□□□□ -3.28
RNU6-539P-201ENST00000516665 SHROOM2Q13796 1616 aa-5.43□□□□□ -3.28
RNU6-539P-201ENST00000516665 DYDC1Q8WWB3 177 aa-5.43□□□□□ -3.28
RNU6-539P-201ENST00000516665 CCDC42Q96M95 316 aa-5.43□□□□□ -3.28
RNU6-539P-201ENST00000516665 ARL2-SNX15V9GYD0 113 aa-5.43□□□□□ -3.28
RNU6-539P-201ENST00000516665 V9GYQ6 96 aa-5.43□□□□□ -3.28
RNU6-539P-201ENST00000516665 ANKRD36CQ5JPF3 1778 aa-5.44□□□□□ -3.28
RNU6-539P-201ENST00000516665 SMIM24O75264 130 aa-5.44□□□□□ -3.28
RNU6-539P-201ENST00000516665 NIPSNAP2O75323 286 aa-5.44□□□□□ -3.28
RNU6-539P-201ENST00000516665 SCN7AQ01118 1682 aa-5.44□□□□□ -3.28
RNU6-539P-201ENST00000516665 TRBV20-1A0A075B6N2 111 aa-5.45□□□□□ -3.28
RNU6-539P-201ENST00000516665 ATG12O94817 140 aa-5.45□□□□□ -3.28
RNU6-539P-201ENST00000516665 LINC00158P58513 81 aa-5.45□□□□□ -3.28
RNU6-539P-201ENST00000516665 ADGRL2O95490 1459 aa-5.45□□□□□ -3.28
RNU6-539P-201ENST00000516665 IFNA1P01562 189 aa-5.46□□□□□ -3.28
RNU6-539P-201ENST00000516665 DEFB130BP0DP73 79 aa-5.46□□□□□ -3.28
RNU6-539P-201ENST00000516665 DEFB130AP0DP74 79 aa-5.46□□□□□ -3.28
RNU6-539P-201ENST00000516665 CDKN2CP42773 168 aa-5.46□□□□□ -3.28
RNU6-539P-201ENST00000516665 TAC4Q86UU9 113 aa-5.46□□□□□ -3.28
RNU6-539P-201ENST00000516665 CUX1P39880 1505 aa-5.47□□□□□ -3.28
RNU6-539P-201ENST00000516665 IGLV5-48A0A075B6I7 105 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 UBE2L5PA0A1B0GUS4 154 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 SNCGO76070 127 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 MT-ND4LP03901 98 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 POLR2HP52434 150 aaKnown RBP-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 PPP1R2P3Q6NXS1 205 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 CHMP4BQ9H444 224 aaKnown RBP-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 CALML5Q9NZT1 146 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 ANKRD30AQ9BXX3 1397 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 TMEM2Q9UHN6 1383 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 CUL7Q14999 1698 aa-5.47□□□□□ -3.29
RNU6-539P-201ENST00000516665 YKT6O15498 198 aa-5.48□□□□□ -3.29
RNU6-539P-201ENST00000516665 MAGOHP61326 146 aaKnown RBP-5.48□□□□□ -3.29
RNU6-539P-201ENST00000516665 FAM24BQ8N5W8 94 aa-5.48□□□□□ -3.29
RNU6-539P-201ENST00000516665 SPTSSAQ969W0 71 aa-5.48□□□□□ -3.29
RNU6-539P-201ENST00000516665 USP32Q8NFA0 1604 aa-5.48□□□□□ -3.29
RNU6-539P-201ENST00000516665 A0A1B0GWA3 101 aa-5.49□□□□□ -3.29
RNU6-539P-201ENST00000516665 M0R129 80 aa-5.49□□□□□ -3.29
RNU6-539P-201ENST00000516665 NDUFB6O95139 128 aa-5.49□□□□□ -3.29
RNU6-539P-201ENST00000516665 C3orf79P0CE67 100 aa-5.49□□□□□ -3.29
RNU6-539P-201ENST00000516665 C9orf153Q5TBE3 101 aa-5.49□□□□□ -3.29
RNU6-539P-201ENST00000516665 DHRS4L2Q6PKH6 230 aa-5.49□□□□□ -3.29
RNU6-539P-201ENST00000516665 TOGARAM1Q9Y4F4 1720 aa-5.5□□□□□ -3.29
RNU6-539P-201ENST00000516665 A0A0G2JND7 137 aa-5.5□□□□□ -3.29
RNU6-539P-201ENST00000516665 MMGT1Q8N4V1 131 aa-5.5□□□□□ -3.29
RNU6-539P-201ENST00000516665 RGPD3A6NKT7 1758 aaPredicted RBP-5.5□□□□□ -3.29
RNU6-539P-201ENST00000516665 RGPD4Q7Z3J3 1758 aa-5.5□□□□□ -3.29
RNU6-539P-201ENST00000516665 RPP14O95059 124 aaKnown RBP-5.51□□□□□ -3.29
RNU6-539P-201ENST00000516665 SAA2P0DJI9 122 aaPredicted RBP-5.51□□□□□ -3.29
RNU6-539P-201ENST00000516665 TMEM244Q5VVB8 128 aa-5.51□□□□□ -3.29
RNU6-539P-201ENST00000516665 CTAGE3PQ8IX95 158 aa-5.51□□□□□ -3.29
RNU6-539P-201ENST00000516665 CFAP53Q96M91 514 aa-5.51□□□□□ -3.29
RNU6-539P-201ENST00000516665 TNRC6CQ9HCJ0 1690 aaKnown RBP-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 K7EP13 123 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 PAEPP09466 180 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 ARMS2P0C7Q2 107 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 CDC26Q8NHZ8 85 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 CCDC115Q96NT0 180 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 NKIRAS1Q9NYS0 192 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 ZNF518AQ6AHZ1 1483 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 RGPD8O14715 1765 aaPredicted RBP-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 RGPD5Q99666 1765 aa-5.52□□□□□ -3.29
RNU6-539P-201ENST00000516665 SYNJ1O43426 1573 aa-5.53□□□□□ -3.29
RNU6-539P-201ENST00000516665 ERICH2A1L162 156 aa-5.53□□□□□ -3.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms