RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 NDUFA6P56556 154 aa12.16□□□□□ -0.46
LMNA-225ENST00000515824 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
LMNA-225ENST00000515824 A0A1W2PNN7 141 aa12.15□□□□□ -0.46
LMNA-225ENST00000515824 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
LMNA-225ENST00000515824 ATP5LO75964 103 aa12.14□□□□□ -0.47
LMNA-225ENST00000515824 C9orf116Q5BN46 136 aaPredicted RBP12.14□□□□□ -0.47
LMNA-225ENST00000515824 Q6ZRP5 223 aa12.14□□□□□ -0.47
LMNA-225ENST00000515824 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
LMNA-225ENST00000515824 J3QL48 77 aa12.13□□□□□ -0.47
LMNA-225ENST00000515824 GAGE2EQ4V326 116 aa12.13□□□□□ -0.47
LMNA-225ENST00000515824 PDZD11Q5EBL8 140 aa12.13□□□□□ -0.47
LMNA-225ENST00000515824 GAGE2DQ9UEU5 116 aa12.13□□□□□ -0.47
LMNA-225ENST00000515824 KRTAP29-1A8MX34 341 aaPredicted RBP12.12□□□□□ -0.47
LMNA-225ENST00000515824 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
LMNA-225ENST00000515824 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
LMNA-225ENST00000515824 NDUFC2-KCTD14E9PQ53 114 aa12.11□□□□□ -0.47
LMNA-225ENST00000515824 H3BRM9 83 aa12.11□□□□□ -0.47
LMNA-225ENST00000515824 TRGC2P03986 189 aa12.11□□□□□ -0.47
LMNA-225ENST00000515824 CXCL5P42830 114 aa12.11□□□□□ -0.47
LMNA-225ENST00000515824 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
LMNA-225ENST00000515824 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
LMNA-225ENST00000515824 FAT3Q8TDW7 4589 aa12.1□□□□□ -0.47
LMNA-225ENST00000515824 F8VRH5 84 aa12.09□□□□□ -0.47
LMNA-225ENST00000515824 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
LMNA-225ENST00000515824 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
LMNA-225ENST00000515824 DMBT1Q9UGM3 2413 aaPredicted RBP12.09□□□□□ -0.47
LMNA-225ENST00000515824 LRP1Q07954 4544 aaKnown RBP12.09□□□□□ -0.47
LMNA-225ENST00000515824 OXTP01178 125 aa12.08□□□□□ -0.48
LMNA-225ENST00000515824 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
LMNA-225ENST00000515824 HSBP1O75506 76 aa12.07□□□□□ -0.48
LMNA-225ENST00000515824 HERC1Q15751 4861 aa12.06□□□□□ -0.48
LMNA-225ENST00000515824 COLCA2A8K830 154 aa12.06□□□□□ -0.48
LMNA-225ENST00000515824 FAM168BA1KXE4 195 aa12.05□□□□□ -0.48
LMNA-225ENST00000515824 PHF5AQ7RTV0 110 aaKnown RBP12.05□□□□□ -0.48
LMNA-225ENST00000515824 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
LMNA-225ENST00000515824 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
LMNA-225ENST00000515824 FAM19A5Q7Z5A7 132 aaPredicted RBP12.03□□□□□ -0.48
LMNA-225ENST00000515824 CHTOPQ9Y3Y2 248 aaKnown RBP12.03□□□□□ -0.48
LMNA-225ENST00000515824 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.49
LMNA-225ENST00000515824 FAM19A2Q8N3H0 131 aa12.02□□□□□ -0.49
LMNA-225ENST00000515824 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
LMNA-225ENST00000515824 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
LMNA-225ENST00000515824 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
LMNA-225ENST00000515824 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
LMNA-225ENST00000515824 PSORS1C2Q9UIG4 136 aa12□□□□□ -0.49
LMNA-225ENST00000515824 SERF1AO75920 110 aa11.99□□□□□ -0.49
LMNA-225ENST00000515824 XAGE1AQ9HD64 81 aa11.99□□□□□ -0.49
LMNA-225ENST00000515824 M0QXV9 152 aa11.98□□□□□ -0.49
LMNA-225ENST00000515824 SPINK6Q6UWN8 80 aa11.98□□□□□ -0.49
LMNA-225ENST00000515824 KRTAP7-1Q8IUC3 87 aa11.98□□□□□ -0.49
LMNA-225ENST00000515824 LEPROTL1O95214 131 aa11.97□□□□□ -0.49
LMNA-225ENST00000515824 C1orf137Q5JT78 98 aa11.97□□□□□ -0.49
LMNA-225ENST00000515824 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.49
LMNA-225ENST00000515824 SCO1O75880 301 aa11.95□□□□□ -0.5
LMNA-225ENST00000515824 UBE2BP63146 152 aa11.95□□□□□ -0.5
LMNA-225ENST00000515824 LINC00310P59036 64 aa11.94□□□□□ -0.5
LMNA-225ENST00000515824 SERTAD4-AS1Q5TG53 156 aa11.94□□□□□ -0.5
LMNA-225ENST00000515824 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
LMNA-225ENST00000515824 HSPB8Q9UJY1 196 aa11.93□□□□□ -0.5
LMNA-225ENST00000515824 C22orf24Q9Y442 160 aa11.93□□□□□ -0.5
LMNA-225ENST00000515824 TMEM223A0PJW6 202 aa11.92□□□□□ -0.5
LMNA-225ENST00000515824 H0Y8G0 127 aa11.92□□□□□ -0.5
LMNA-225ENST00000515824 NUPR1O60356 82 aa11.92□□□□□ -0.5
LMNA-225ENST00000515824 LBHQ53QV2 105 aaPredicted RBP11.92□□□□□ -0.5
LMNA-225ENST00000515824 PFN2P35080 140 aa11.91□□□□□ -0.5
LMNA-225ENST00000515824 REG3GQ6UW15 175 aa11.91□□□□□ -0.5
LMNA-225ENST00000515824 KRTAP11-1Q8IUC1 163 aa11.91□□□□□ -0.5
LMNA-225ENST00000515824 FABP4P15090 132 aa11.9□□□□□ -0.5
LMNA-225ENST00000515824 COX17Q14061 63 aa11.9□□□□□ -0.5
LMNA-225ENST00000515824 ODF1Q14990 250 aa11.9□□□□□ -0.5
LMNA-225ENST00000515824 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
LMNA-225ENST00000515824 IGLV7-43P04211 117 aa11.89□□□□□ -0.51
LMNA-225ENST00000515824 ZNF625Q96I27 306 aaPredicted RBP11.89□□□□□ -0.51
LMNA-225ENST00000515824 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
LMNA-225ENST00000515824 PLA2G2DQ9UNK4 145 aa11.89□□□□□ -0.51
LMNA-225ENST00000515824 MRPL55Q7Z7F7 128 aaKnown RBP11.88□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BKO60814 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BJP06899 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BOP23527 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BBP33778 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BDP58876 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BCP62807 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST2H2BEQ16778 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BHQ93079 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 LINC01600Q96MT4 127 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BNQ99877 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 HIST1H2BMQ99879 126 aa11.87□□□□□ -0.51
LMNA-225ENST00000515824 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
LMNA-225ENST00000515824 MAP1LC3CQ9BXW4 147 aa11.85□□□□□ -0.51
LMNA-225ENST00000515824 TNXBP22105 4242 aa11.85□□□□□ -0.51
LMNA-225ENST00000515824 PLNP26678 52 aa11.84□□□□□ -0.51
LMNA-225ENST00000515824 NKAPP1Q8N9T2 125 aa11.84□□□□□ -0.51
LMNA-225ENST00000515824 DIRC1Q969H9 104 aa11.84□□□□□ -0.51
LMNA-225ENST00000515824 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
LMNA-225ENST00000515824 IGLV5-37A0A075B6J1 123 aa11.82□□□□□ -0.52
LMNA-225ENST00000515824 DPM2O94777 84 aa11.82□□□□□ -0.52
LMNA-225ENST00000515824 LINC00158P58513 81 aa11.82□□□□□ -0.52
LMNA-225ENST00000515824 LINC00167Q96N53 147 aa11.82□□□□□ -0.52
LMNA-225ENST00000515824 IGKCP01834 107 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms