RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 VCX2Q9H322 139 aa6.95□□□□□ -1.3
UBE2D3-232ENST00000514755 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
UBE2D3-232ENST00000514755 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 A0A096LNJ9 63 aa6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 CBLN2Q8IUK8 224 aa6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 OR10D4PQ8NGN7 298 aa6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 SCGB3A1Q96QR1 104 aa6.94□□□□□ -1.3
UBE2D3-232ENST00000514755 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 FAT3Q8TDW7 4589 aa6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 RPL37AP61513 92 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 ERASQ7Z444 233 aa6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 STPG4Q8N801 248 aa6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 KRTAP4-2Q9BYR5 136 aa6.93□□□□□ -1.3
UBE2D3-232ENST00000514755 G0S2P27469 103 aa6.92□□□□□ -1.3
UBE2D3-232ENST00000514755 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
UBE2D3-232ENST00000514755 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
UBE2D3-232ENST00000514755 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
UBE2D3-232ENST00000514755 SMCO4Q9NRQ5 59 aa6.92□□□□□ -1.3
UBE2D3-232ENST00000514755 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
UBE2D3-232ENST00000514755 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
UBE2D3-232ENST00000514755 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
UBE2D3-232ENST00000514755 MRPL35Q9NZE8 188 aaKnown RBP6.91□□□□□ -1.3
UBE2D3-232ENST00000514755 CDKN2A-AS1Q9UH64 79 aa6.91□□□□□ -1.3
UBE2D3-232ENST00000514755 LOC107984640A0A0U1RRK4 108 aa6.9□□□□□ -1.3
UBE2D3-232ENST00000514755 A0A1W2PNN7 141 aa6.9□□□□□ -1.3
UBE2D3-232ENST00000514755 LINC00614P0C842 121 aa6.9□□□□□ -1.3
UBE2D3-232ENST00000514755 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-232ENST00000514755 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
UBE2D3-232ENST00000514755 LINC01561Q8N1V8 128 aa6.9□□□□□ -1.3
UBE2D3-232ENST00000514755 NDUFA1O15239 70 aa6.89□□□□□ -1.31
UBE2D3-232ENST00000514755 HERVK_113P63121 156 aa6.89□□□□□ -1.31
UBE2D3-232ENST00000514755 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
UBE2D3-232ENST00000514755 HERC1Q15751 4861 aa6.89□□□□□ -1.31
UBE2D3-232ENST00000514755 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-232ENST00000514755 Q6ZRP5 223 aa6.88□□□□□ -1.31
UBE2D3-232ENST00000514755 GEMIN7Q9H840 131 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-232ENST00000514755 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
UBE2D3-232ENST00000514755 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
UBE2D3-232ENST00000514755 TINCRA0A1B0GVN0 87 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 LINC01549A6NIU2 74 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 F8WDY8 70 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 HBDP02042 147 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 SEC11AP67812 179 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 PMVKQ15126 192 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 PDZD11Q5EBL8 140 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
UBE2D3-232ENST00000514755 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 FAM168BA1KXE4 195 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 SMIM1B2RUZ4 78 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 TRGC2P03986 189 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 GAGE2EQ4V326 116 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 Q8IZM0 81 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 PACRGQ96M98 296 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 GAGE2DQ9UEU5 116 aa6.86□□□□□ -1.31
UBE2D3-232ENST00000514755 PRSS2P07478 247 aa6.85□□□□□ -1.31
UBE2D3-232ENST00000514755 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
UBE2D3-232ENST00000514755 NDUFA6P56556 154 aa6.85□□□□□ -1.31
UBE2D3-232ENST00000514755 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
UBE2D3-232ENST00000514755 C7orf33Q8WU49 177 aa6.85□□□□□ -1.31
UBE2D3-232ENST00000514755 TRBV30A0A0K0K1B3 111 aa6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 COLCA2A8K830 154 aa6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 RAB5BP61020 215 aa6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 PRR3P79522 188 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 C6orf226Q5I0X4 101 aa6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 PHF5AQ7RTV0 110 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-232ENST00000514755 SCO1O75880 301 aa6.83□□□□□ -1.32
UBE2D3-232ENST00000514755 IGLC3P0DOY3 106 aa6.83□□□□□ -1.32
UBE2D3-232ENST00000514755 CKS1BP61024 79 aa6.83□□□□□ -1.32
UBE2D3-232ENST00000514755 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-232ENST00000514755 NDUFC2-KCTD14E9PQ53 114 aa6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 ZNF22P17026 224 aaPredicted RBP6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 BAGE3Q86Y29 109 aa6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 KRTAP11-1Q8IUC1 163 aa6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 COX7B2Q8TF08 81 aa6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 CHCHD1Q96BP2 118 aaKnown RBP6.82□□□□□ -1.32
UBE2D3-232ENST00000514755 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
UBE2D3-232ENST00000514755 ATP5LO75964 103 aa6.81□□□□□ -1.32
UBE2D3-232ENST00000514755 FAM19A5Q7Z5A7 132 aaPredicted RBP6.81□□□□□ -1.32
UBE2D3-232ENST00000514755 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
UBE2D3-232ENST00000514755 F8VRH5 84 aa6.8□□□□□ -1.32
UBE2D3-232ENST00000514755 NUPR1O60356 82 aa6.8□□□□□ -1.32
UBE2D3-232ENST00000514755 HSBP1O75506 76 aa6.79□□□□□ -1.32
UBE2D3-232ENST00000514755 SERF1AO75920 110 aa6.79□□□□□ -1.32
UBE2D3-232ENST00000514755 CXCL5P42830 114 aa6.79□□□□□ -1.32
UBE2D3-232ENST00000514755 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
UBE2D3-232ENST00000514755 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
UBE2D3-232ENST00000514755 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
UBE2D3-232ENST00000514755 IGLV5-39A0A0G2JS06 123 aa6.78□□□□□ -1.32
UBE2D3-232ENST00000514755 H3BRM9 83 aa6.78□□□□□ -1.32
UBE2D3-232ENST00000514755 OXTP01178 125 aa6.78□□□□□ -1.32
UBE2D3-232ENST00000514755 SERTAD4-AS1Q5TG53 156 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms