RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 K7EQG2 157 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 OPRPNQ99935 248 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-219ENST00000514743 F5H697 171 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 COX7A2LO14548 114 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 FAM74A4Q5TZK3 123 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 KRTAP1-3Q8IUG1 177 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 LRRK2Q5S007 2527 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 A0A0J9YX75 114 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 LRCOL1A6NCL2 159 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 Q1T7F1 81 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 NKAPP1Q8N9T2 125 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 IGHV3-64A0A075B6Q5 118 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 BCE1O60756 84 aa5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 PHF5AQ7RTV0 110 aaKnown RBP5.32□□□□□ -1.56
PDLIM5-219ENST00000514743 RPL39P62891 51 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-219ENST00000514743 C18orf65Q6ZTR6 163 aa5.31□□□□□ -1.56
PDLIM5-219ENST00000514743 FAM208BQ5VWN6 2430 aa5.31□□□□□ -1.56
PDLIM5-219ENST00000514743 IGLV4-69A0A075B6H9 119 aa5.31□□□□□ -1.56
PDLIM5-219ENST00000514743 Q6ZRP5 223 aa5.31□□□□□ -1.56
PDLIM5-219ENST00000514743 LINC00269Q8N2A0 174 aa5.31□□□□□ -1.56
PDLIM5-219ENST00000514743 IGHV3-16A0A0C4DH30 117 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 SYCNQ0VAF6 134 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 TMEM61Q8N0U2 210 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 LEPROTO15243 131 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 HTN1P15515 57 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 UBE2AP49459 152 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 SUMO4Q6EEV6 95 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 ABCA12Q86UK0 2595 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 A0A0J9YXY3 114 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 DEFB113Q30KQ7 82 aa5.3□□□□□ -1.56
PDLIM5-219ENST00000514743 SDHAF1A6NFY7 115 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 TSHBP01222 138 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 POLR2KP53803 58 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 DIRC1Q969H9 104 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 C22orf24Q9Y442 160 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 PDZD2O15018 2839 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 IGIPA6NJ69 53 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 DEFB136Q30KP8 78 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 ITPR3Q14573 2671 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 PTPN13Q12923 2485 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 TRAV22A0A0B4J277 110 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 SLURP1P55000 103 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 SPINK13Q1W4C9 94 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 Q9HAA7 133 aa5.29□□□□□ -1.56
PDLIM5-219ENST00000514743 TLN2Q9Y4G6 2542 aa5.28□□□□□ -1.56
PDLIM5-219ENST00000514743 PRM2P04554 102 aa5.28□□□□□ -1.56
PDLIM5-219ENST00000514743 CD28P10747 220 aa5.28□□□□□ -1.56
PDLIM5-219ENST00000514743 NF1P21359 2839 aa5.28□□□□□ -1.56
PDLIM5-219ENST00000514743 TMEM141Q96I45 108 aa5.28□□□□□ -1.56
PDLIM5-219ENST00000514743 MYO9AB2RTY4 2548 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 IGHV3-73A0A0B4J1V6 119 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 A8MTW9 85 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 A6NN06 94 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 PPP1R17O96001 155 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 LINC00313P59037 77 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 CHD6Q8TD26 2715 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 TRBV6-5A0A0K0K1A5 114 aa5.27□□□□□ -1.57
PDLIM5-219ENST00000514743 SETD2Q9BYW2 2564 aaPredicted RBP5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 TRAV10A0A0B4J240 114 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 M0QY20 66 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 MIAQ16674 131 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 C16orf90A8MZG2 172 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 PIK3CD-AS1Q5SR53 167 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 TMEM254Q8TBM7 123 aa5.26□□□□□ -1.57
PDLIM5-219ENST00000514743 ZNF625Q96I27 306 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 NIPBLQ6KC79 2804 aaeCLIP5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 MP68P56378 58 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 C4orf3Q8WVX3 66 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 NAV2Q8IVL1 2488 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 SONP18583 2426 aaKnown RBP5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 CHKB-CPT1BH3BT56 60 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 PRYO14603 147 aa5.25□□□□□ -1.57
PDLIM5-219ENST00000514743 TRBV7-4A0A0J9YYF1 115 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 HCG22E2RYF7 251 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 RNASE13Q5GAN3 156 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 C9orf129Q5T035 196 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 UBL5Q9BZL1 73 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 WNK1Q9H4A3 2382 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 PROK1P58294 105 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 DEFB131AP59861 70 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 LITAFQ99732 161 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 FAM218AQ96MZ4 157 aa5.24□□□□□ -1.57
PDLIM5-219ENST00000514743 EPG5Q9HCE0 2579 aa5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 C2CD3Q4AC94 2353 aa5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 NCR3O14931 201 aa5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 Q6ZTC4 211 aa5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 MAP6D1Q9H9H5 199 aa5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 ESM1Q9NQ30 184 aa5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-219ENST00000514743 FLNAP21333 2647 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms