RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 UBE2BP63146 152 aa10.13□□□□□ -0.79
MATR3-220ENST00000512876 LPAP08519 4548 aa10.12□□□□□ -0.79
MATR3-220ENST00000512876 TRAV9-1A0A075B6T8 112 aa10.12□□□□□ -0.79
MATR3-220ENST00000512876 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
MATR3-220ENST00000512876 ALKBH7Q9BT30 221 aaPredicted RBP10.12□□□□□ -0.79
MATR3-220ENST00000512876 IGLV1-50A0A075B6I6 118 aa10.11□□□□□ -0.79
MATR3-220ENST00000512876 KIAA1644Q3SXP7 199 aa10.11□□□□□ -0.79
MATR3-220ENST00000512876 UQCC3Q6UW78 93 aa10.11□□□□□ -0.79
MATR3-220ENST00000512876 ERASQ7Z444 233 aa10.11□□□□□ -0.79
MATR3-220ENST00000512876 TMEM218A2RU14 115 aa10.1□□□□□ -0.79
MATR3-220ENST00000512876 LINC01546A6NGU7 62 aa10.1□□□□□ -0.79
MATR3-220ENST00000512876 F8VRH5 84 aa10.1□□□□□ -0.79
MATR3-220ENST00000512876 GEMIN7Q9H840 131 aaKnown RBP10.1□□□□□ -0.79
MATR3-220ENST00000512876 CXCL5P42830 114 aa10.09□□□□□ -0.79
MATR3-220ENST00000512876 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
MATR3-220ENST00000512876 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
MATR3-220ENST00000512876 SMIM1B2RUZ4 78 aa10.08□□□□□ -0.8
MATR3-220ENST00000512876 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
MATR3-220ENST00000512876 GNB1LQ9BYB4 327 aa10.08□□□□□ -0.8
MATR3-220ENST00000512876 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
MATR3-220ENST00000512876 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
MATR3-220ENST00000512876 TINCRA0A1B0GVN0 87 aa10.06□□□□□ -0.8
MATR3-220ENST00000512876 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
MATR3-220ENST00000512876 IFITM2Q01629 132 aa10.06□□□□□ -0.8
MATR3-220ENST00000512876 SEC11CQ9BY50 192 aa10.06□□□□□ -0.8
MATR3-220ENST00000512876 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
MATR3-220ENST00000512876 NUPR1O60356 82 aa10.05□□□□□ -0.8
MATR3-220ENST00000512876 ZNF861PO60384 105 aa10.05□□□□□ -0.8
MATR3-220ENST00000512876 PDZD11Q5EBL8 140 aa10.05□□□□□ -0.8
MATR3-220ENST00000512876 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
MATR3-220ENST00000512876 S100PP25815 95 aa10.03□□□□□ -0.8
MATR3-220ENST00000512876 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
MATR3-220ENST00000512876 MRPL55Q7Z7F7 128 aaKnown RBP10.03□□□□□ -0.8
MATR3-220ENST00000512876 COX7B2Q8TF08 81 aa10.03□□□□□ -0.8
MATR3-220ENST00000512876 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
MATR3-220ENST00000512876 COX19Q49B96 90 aa10.02□□□□□ -0.81
MATR3-220ENST00000512876 CARHSP1Q9Y2V2 147 aaKnown RBP10.02□□□□□ -0.81
MATR3-220ENST00000512876 PMVKQ15126 192 aa10.01□□□□□ -0.81
MATR3-220ENST00000512876 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
MATR3-220ENST00000512876 C10orf91Q5T1B1 145 aa9.99□□□□□ -0.81
MATR3-220ENST00000512876 FA2HQ7L5A8 372 aa9.99□□□□□ -0.81
MATR3-220ENST00000512876 MRPL18Q9H0U6 180 aaKnown RBP9.99□□□□□ -0.81
MATR3-220ENST00000512876 IGLV5-37A0A075B6J1 123 aa9.98□□□□□ -0.81
MATR3-220ENST00000512876 BCE1O60756 84 aa9.98□□□□□ -0.81
MATR3-220ENST00000512876 A0A096LNJ9 63 aa9.97□□□□□ -0.81
MATR3-220ENST00000512876 FABP9Q0Z7S8 132 aa9.97□□□□□ -0.81
MATR3-220ENST00000512876 LINC00167Q96N53 147 aa9.97□□□□□ -0.81
MATR3-220ENST00000512876 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.82
MATR3-220ENST00000512876 IGLC3P0DOY3 106 aa9.96□□□□□ -0.82
MATR3-220ENST00000512876 RPL28P46779 137 aaKnown RBP9.96□□□□□ -0.82
MATR3-220ENST00000512876 RHEBQ15382 184 aa9.96□□□□□ -0.82
MATR3-220ENST00000512876 COMMD7Q86VX2 200 aa9.96□□□□□ -0.82
MATR3-220ENST00000512876 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
MATR3-220ENST00000512876 H3BRM9 83 aa9.95□□□□□ -0.82
MATR3-220ENST00000512876 URB1-AS1Q96HZ7 61 aa9.95□□□□□ -0.82
MATR3-220ENST00000512876 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
MATR3-220ENST00000512876 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
MATR3-220ENST00000512876 A0A087X002 238 aa9.93□□□□□ -0.82
MATR3-220ENST00000512876 ATP5LO75964 103 aa9.93□□□□□ -0.82
MATR3-220ENST00000512876 RAB5BP61020 215 aa9.93□□□□□ -0.82
MATR3-220ENST00000512876 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
MATR3-220ENST00000512876 RPS10P5Q9NQ39 176 aa9.93□□□□□ -0.82
MATR3-220ENST00000512876 GAGE10A6NGK3 116 aa9.92□□□□□ -0.82
MATR3-220ENST00000512876 ZNF22P17026 224 aaPredicted RBP9.92□□□□□ -0.82
MATR3-220ENST00000512876 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
MATR3-220ENST00000512876 HBDP02042 147 aa9.9□□□□□ -0.82
MATR3-220ENST00000512876 LINC00614P0C842 121 aa9.89□□□□□ -0.83
MATR3-220ENST00000512876 CRYGAP11844 174 aa9.88□□□□□ -0.83
MATR3-220ENST00000512876 VPREB1P12018 145 aa9.88□□□□□ -0.83
MATR3-220ENST00000512876 PRR4Q16378 134 aa9.88□□□□□ -0.83
MATR3-220ENST00000512876 TRAPPC1Q9Y5R8 145 aa9.88□□□□□ -0.83
MATR3-220ENST00000512876 MUC2Q02817 5179 aa9.88□□□□□ -0.83
MATR3-220ENST00000512876 SCO1O75880 301 aa9.87□□□□□ -0.83
MATR3-220ENST00000512876 PFN2P35080 140 aa9.87□□□□□ -0.83
MATR3-220ENST00000512876 NDUFA6P56556 154 aa9.87□□□□□ -0.83
MATR3-220ENST00000512876 ERG28Q9UKR5 140 aa9.87□□□□□ -0.83
MATR3-220ENST00000512876 IGKV2-28A0A075B6P5 120 aa9.86□□□□□ -0.83
MATR3-220ENST00000512876 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
MATR3-220ENST00000512876 IGKV2D-28P01615 120 aa9.86□□□□□ -0.83
MATR3-220ENST00000512876 COX17Q14061 63 aa9.86□□□□□ -0.83
MATR3-220ENST00000512876 PMCHL1Q16048 86 aa9.86□□□□□ -0.83
MATR3-220ENST00000512876 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
MATR3-220ENST00000512876 UBE2AP49459 152 aa9.85□□□□□ -0.83
MATR3-220ENST00000512876 TYMSOSQ8TAI1 123 aa9.85□□□□□ -0.83
MATR3-220ENST00000512876 FAM229BQ4G0N7 80 aa9.84□□□□□ -0.83
MATR3-220ENST00000512876 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
MATR3-220ENST00000512876 Q8NDZ9 215 aa9.84□□□□□ -0.83
MATR3-220ENST00000512876 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
MATR3-220ENST00000512876 ANAPC11Q9NYG5 84 aa9.84□□□□□ -0.83
MATR3-220ENST00000512876 TSPAN13O95857 204 aa9.83□□□□□ -0.84
MATR3-220ENST00000512876 SFTA2Q6UW10 78 aa9.83□□□□□ -0.84
MATR3-220ENST00000512876 BAGE3Q86Y29 109 aa9.83□□□□□ -0.84
MATR3-220ENST00000512876 TMEM126AQ9H061 195 aa9.82□□□□□ -0.84
MATR3-220ENST00000512876 TMEM238C9JI98 176 aa9.81□□□□□ -0.84
MATR3-220ENST00000512876 APOC3P02656 99 aa9.81□□□□□ -0.84
MATR3-220ENST00000512876 PRLHP81277 87 aa9.81□□□□□ -0.84
MATR3-220ENST00000512876 RPL24P83731 157 aaKnown RBP9.81□□□□□ -0.84
MATR3-220ENST00000512876 TMEM170BQ5T4T1 132 aa9.81□□□□□ -0.84
MATR3-220ENST00000512876 M0R378 163 aa9.8□□□□□ -0.84
MATR3-220ENST00000512876 YPEL4Q96NS1 127 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms