RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SCO1O75880 301 aa7.58□□□□□ -1.2
VEGFA-216ENST00000512683 TOMM6Q96B49 74 aa7.58□□□□□ -1.2
VEGFA-216ENST00000512683 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
VEGFA-216ENST00000512683 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
VEGFA-216ENST00000512683 UBE2BP63146 152 aa7.57□□□□□ -1.2
VEGFA-216ENST00000512683 GAGE2EQ4V326 116 aa7.57□□□□□ -1.2
VEGFA-216ENST00000512683 PACRGQ96M98 296 aaPredicted RBP7.57□□□□□ -1.2
VEGFA-216ENST00000512683 GAGE2DQ9UEU5 116 aa7.57□□□□□ -1.2
VEGFA-216ENST00000512683 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
VEGFA-216ENST00000512683 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
VEGFA-216ENST00000512683 GNB1LQ9BYB4 327 aa7.56□□□□□ -1.2
VEGFA-216ENST00000512683 CDKN2A-AS1Q9UH64 79 aa7.56□□□□□ -1.2
VEGFA-216ENST00000512683 LINC01546A6NGU7 62 aa7.55□□□□□ -1.2
VEGFA-216ENST00000512683 M0QXV9 152 aa7.55□□□□□ -1.2
VEGFA-216ENST00000512683 G0S2P27469 103 aa7.55□□□□□ -1.2
VEGFA-216ENST00000512683 LBHQ53QV2 105 aaPredicted RBP7.55□□□□□ -1.2
VEGFA-216ENST00000512683 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
VEGFA-216ENST00000512683 ERASQ7Z444 233 aa7.55□□□□□ -1.2
VEGFA-216ENST00000512683 ALKBH7Q9BT30 221 aaPredicted RBP7.55□□□□□ -1.2
VEGFA-216ENST00000512683 NUPR1O60356 82 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 ZNF861PO60384 105 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 HERVK_113P63121 156 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 PAPPA-AS1Q5QFB9 102 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 Q8IZM0 81 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 SMCO4Q9NRQ5 59 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 TOMM7Q9P0U1 55 aa7.54□□□□□ -1.2
VEGFA-216ENST00000512683 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
VEGFA-216ENST00000512683 SEC11AP67812 179 aa7.53□□□□□ -1.2
VEGFA-216ENST00000512683 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
VEGFA-216ENST00000512683 SCGB3A1Q96QR1 104 aa7.53□□□□□ -1.2
VEGFA-216ENST00000512683 LPAP08519 4548 aa7.53□□□□□ -1.2
VEGFA-216ENST00000512683 A0A0U1RQV1 116 aa7.52□□□□□ -1.21
VEGFA-216ENST00000512683 PRSS2P07478 247 aa7.52□□□□□ -1.21
VEGFA-216ENST00000512683 S100PP25815 95 aa7.52□□□□□ -1.21
VEGFA-216ENST00000512683 CKS1BP61024 79 aa7.52□□□□□ -1.21
VEGFA-216ENST00000512683 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
VEGFA-216ENST00000512683 RHEBQ15382 184 aa7.51□□□□□ -1.21
VEGFA-216ENST00000512683 PRR4Q16378 134 aa7.51□□□□□ -1.21
VEGFA-216ENST00000512683 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
VEGFA-216ENST00000512683 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
VEGFA-216ENST00000512683 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
VEGFA-216ENST00000512683 COX19Q49B96 90 aa7.5□□□□□ -1.21
VEGFA-216ENST00000512683 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
VEGFA-216ENST00000512683 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
VEGFA-216ENST00000512683 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
VEGFA-216ENST00000512683 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
VEGFA-216ENST00000512683 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
VEGFA-216ENST00000512683 LINC01549A6NIU2 74 aa7.49□□□□□ -1.21
VEGFA-216ENST00000512683 F8VRH5 84 aa7.49□□□□□ -1.21
VEGFA-216ENST00000512683 FABP9Q0Z7S8 132 aa7.49□□□□□ -1.21
VEGFA-216ENST00000512683 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
VEGFA-216ENST00000512683 RPS10P5Q9NQ39 176 aa7.49□□□□□ -1.21
VEGFA-216ENST00000512683 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
VEGFA-216ENST00000512683 MUC2Q02817 5179 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 A0A096LNJ9 63 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 CXCL5P42830 114 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 PMVKQ15126 192 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 PDZD11Q5EBL8 140 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
VEGFA-216ENST00000512683 RAB5BP61020 215 aa7.46□□□□□ -1.22
VEGFA-216ENST00000512683 CTAG1AP78358 180 aa7.46□□□□□ -1.22
VEGFA-216ENST00000512683 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
VEGFA-216ENST00000512683 BCE1O60756 84 aa7.45□□□□□ -1.22
VEGFA-216ENST00000512683 SPINK8P0C7L1 97 aa7.45□□□□□ -1.22
VEGFA-216ENST00000512683 CRYGAP11844 174 aa7.45□□□□□ -1.22
VEGFA-216ENST00000512683 C18orf32Q8TCD1 76 aa7.45□□□□□ -1.22
VEGFA-216ENST00000512683 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
VEGFA-216ENST00000512683 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
VEGFA-216ENST00000512683 COLCA2A8K830 154 aa7.43□□□□□ -1.22
VEGFA-216ENST00000512683 LINC00614P0C842 121 aa7.43□□□□□ -1.22
VEGFA-216ENST00000512683 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
VEGFA-216ENST00000512683 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
VEGFA-216ENST00000512683 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
VEGFA-216ENST00000512683 S100A6P06703 90 aa7.41□□□□□ -1.22
VEGFA-216ENST00000512683 PMCHL1Q16048 86 aa7.41□□□□□ -1.22
VEGFA-216ENST00000512683 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
VEGFA-216ENST00000512683 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
VEGFA-216ENST00000512683 H3BRM9 83 aa7.4□□□□□ -1.22
VEGFA-216ENST00000512683 HBDP02042 147 aa7.4□□□□□ -1.22
VEGFA-216ENST00000512683 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
VEGFA-216ENST00000512683 FAM229BQ4G0N7 80 aa7.4□□□□□ -1.22
VEGFA-216ENST00000512683 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
VEGFA-216ENST00000512683 RPL37AP8A6NKH3 93 aa7.39□□□□□ -1.23
VEGFA-216ENST00000512683 TSPAN13O95857 204 aa7.39□□□□□ -1.23
VEGFA-216ENST00000512683 NDUFA6P56556 154 aa7.39□□□□□ -1.23
VEGFA-216ENST00000512683 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
VEGFA-216ENST00000512683 A0A087X002 238 aa7.38□□□□□ -1.23
VEGFA-216ENST00000512683 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
VEGFA-216ENST00000512683 ATP5LO75964 103 aa7.37□□□□□ -1.23
VEGFA-216ENST00000512683 GAGE10A6NGK3 116 aa7.36□□□□□ -1.23
VEGFA-216ENST00000512683 PFN2P35080 140 aa7.36□□□□□ -1.23
VEGFA-216ENST00000512683 BAGE3Q86Y29 109 aa7.36□□□□□ -1.23
VEGFA-216ENST00000512683 KRTAP13-1Q8IUC0 172 aa7.36□□□□□ -1.23
VEGFA-216ENST00000512683 UBE2AP49459 152 aa7.35□□□□□ -1.23
VEGFA-216ENST00000512683 NKAPP1Q8N9T2 125 aa7.35□□□□□ -1.23
VEGFA-216ENST00000512683 LINC00518Q8N0U6 118 aa7.34□□□□□ -1.23
VEGFA-216ENST00000512683 SND1-IT1Q9HBX3 110 aa7.34□□□□□ -1.23
VEGFA-216ENST00000512683 ERG28Q9UKR5 140 aa7.34□□□□□ -1.23
VEGFA-216ENST00000512683 C5orf52A6NGY3 159 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms