RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 TMEM97Q5BJF2 176 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 SLC25A34Q6PIV7 304 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 PLAC8Q9NZF1 115 aa5.67□□□□□ -1.5
NUP54-211ENST00000512151 TRBV25-1A0A075B6N4 114 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
NUP54-211ENST00000512151 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
NUP54-211ENST00000512151 COX8AP10176 69 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 GAGE6Q13070 117 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
NUP54-211ENST00000512151 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 ENHOQ6UWT2 76 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 TOMM6Q96B49 74 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 DPH3Q96FX2 82 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 KIR2DL4Q99706 377 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 TMEM243Q9BU79 118 aa5.66□□□□□ -1.5
NUP54-211ENST00000512151 RPL39P62891 51 aaKnown RBP5.65□□□□□ -1.51
NUP54-211ENST00000512151 MPV17L2Q567V2 206 aa5.65□□□□□ -1.51
NUP54-211ENST00000512151 COL5A1-AS1Q5SY13 56 aa5.65□□□□□ -1.51
NUP54-211ENST00000512151 C20orf203Q8NBC4 194 aa5.65□□□□□ -1.51
NUP54-211ENST00000512151 C7orf33Q8WU49 177 aa5.65□□□□□ -1.51
NUP54-211ENST00000512151 CHCHD5Q9BSY4 110 aa5.65□□□□□ -1.51
NUP54-211ENST00000512151 IGLV4-60A0A075B6I1 120 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 TMEM262E9PQX1 116 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 DLEU1O43261 78 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 FGF6P10767 208 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 ANKRD39Q53RE8 183 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 FAM104AQ969W3 186 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 C1orf43Q9BWL3 253 aa5.64□□□□□ -1.51
NUP54-211ENST00000512151 A0A087WX48 190 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.63□□□□□ -1.51
NUP54-211ENST00000512151 DPM2O94777 84 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 IGKCP01834 107 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 SLPIP03973 132 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 RBX1P62877 108 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 KRTAP26-1Q6PEX3 210 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 BOD1L2Q8IYS8 172 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 STPG4Q8N801 248 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 UBE2D4Q9Y2X8 147 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 MUC17Q685J3 4493 aa5.63□□□□□ -1.51
NUP54-211ENST00000512151 H7C423 109 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 UBE2L6O14933 153 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 HINT1P49773 126 aaPredicted RBP5.62□□□□□ -1.51
NUP54-211ENST00000512151 BATFQ16520 125 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 C2orf66Q6UXQ4 117 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 C2orf91Q6ZV80 131 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 ERASQ7Z444 233 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 SCGB3A1Q96QR1 104 aa5.62□□□□□ -1.51
NUP54-211ENST00000512151 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
NUP54-211ENST00000512151 A0A1B0GUV1 79 aa5.61□□□□□ -1.51
NUP54-211ENST00000512151 CNBPP62633 177 aaKnown RBP5.61□□□□□ -1.51
NUP54-211ENST00000512151 PRR4Q16378 134 aa5.61□□□□□ -1.51
NUP54-211ENST00000512151 LINC00469Q8N7U9 141 aa5.61□□□□□ -1.51
NUP54-211ENST00000512151 MRPL35Q9NZE8 188 aaKnown RBP5.61□□□□□ -1.51
NUP54-211ENST00000512151 TP73-AS1Q9UF72 201 aa5.61□□□□□ -1.51
NUP54-211ENST00000512151 CYSLTR1Q9Y271 337 aa5.61□□□□□ -1.51
NUP54-211ENST00000512151 IGHV3-64A0A075B6Q5 118 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 IGIPA6NJ69 53 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 F8VRH5 84 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 NPSP0C0P6 89 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 PLNP26678 52 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 RNASE13Q5GAN3 156 aaKnown RBP5.6□□□□□ -1.51
NUP54-211ENST00000512151 BVES-AS1Q5T3Y7 98 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 TIMM21Q9BVV7 248 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
NUP54-211ENST00000512151 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
NUP54-211ENST00000512151 PAPPA-AS1Q5QFB9 102 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 AMMECR1LQ6DCA0 310 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 CLPSL2Q6UWE3 100 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 Q6ZUT4 128 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 LINC00269Q8N2A0 174 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 TMEM141Q96I45 108 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 CHTOPQ9Y3Y2 248 aaKnown RBP5.59□□□□□ -1.51
NUP54-211ENST00000512151 PYGO1Q9Y3Y4 419 aa5.59□□□□□ -1.51
NUP54-211ENST00000512151 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
NUP54-211ENST00000512151 IGLV4-3A0A075B6K6 122 aa5.58□□□□□ -1.52
NUP54-211ENST00000512151 ZNF25P17030 456 aaPredicted RBP5.58□□□□□ -1.52
NUP54-211ENST00000512151 NMUP48645 174 aa5.58□□□□□ -1.52
NUP54-211ENST00000512151 PRR26Q8N8Z3 221 aa5.58□□□□□ -1.52
NUP54-211ENST00000512151 PRR34Q9NV39 138 aa5.58□□□□□ -1.52
NUP54-211ENST00000512151 HIGD1BQ9P298 99 aa5.58□□□□□ -1.52
NUP54-211ENST00000512151 IGKV2D-26A0A0A0MRZ7 120 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
NUP54-211ENST00000512151 REG3AQ06141 175 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 HSD52Q0P140 79 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 PCP2Q8IVA1 136 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 OR5A1Q8NGJ0 315 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 ORAOV1Q8WV07 137 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 TMEM101Q96IK0 257 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 SPANXA1Q9NS26 97 aa5.57□□□□□ -1.52
NUP54-211ENST00000512151 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
NUP54-211ENST00000512151 CRPP02741 224 aa5.56□□□□□ -1.52
NUP54-211ENST00000512151 SEC11AP67812 179 aa5.56□□□□□ -1.52
NUP54-211ENST00000512151 PMVKQ15126 192 aa5.56□□□□□ -1.52
NUP54-211ENST00000512151 AMELXQ99217 191 aa5.56□□□□□ -1.52
NUP54-211ENST00000512151 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms