RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ACYP1P07311 99 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 FCER1GP30273 86 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 UBE2D1P51668 147 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZNF137PP52743 207 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 C5orf56Q8N8D9 126 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGLV8-61A0A075B6I0 122 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 IGHV3-35A0A0C4DH35 117 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 HIGD1CA8MV81 97 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 IBA57-AS1B1ANH7 110 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 SAA1P0DJI8 122 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 FXYD7P58549 80 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 HIST1H4AP62805 103 aaKnown RBP3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZFAND2AQ8N6M9 145 aa3.49□□□□□ -1.85
TRAPPC11-208ENST00000511955 ANK2Q01484 3957 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 CLPSL1A2RUU4 121 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 G3V318 75 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 KRTAP10-3P60369 221 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 DEFB121Q5J5C9 76 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 C10orf55Q5SWW7 151 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 LINC00643Q86TS7 51 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 LINC00269Q8N2A0 174 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 Q8N9W7 124 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 A0A096LNJ9 63 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 SMIM1B2RUZ4 78 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 DEFA4P12838 97 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 NDPQ00604 133 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 CASC10Q5T4H9 136 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 TMEM167BQ9NRX6 74 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 ZNF355PQ9NSJ1 428 aa3.48□□□□□ -1.85
TRAPPC11-208ENST00000511955 NOTCH3Q9UM47 2321 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 MEGF8Q7Z7M0 2845 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 TRAV3A0A0B4J244 114 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 PROK1P58294 105 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 Q1T7F1 81 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 SPINK9Q5DT21 86 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 C2orf66Q6UXQ4 117 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 Q8N6K4 173 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 NPBQ8NG41 125 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 NDUFA12Q9UI09 145 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 ATXN8Q156A1 80 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 C7orf33Q8WU49 177 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 GFRA4Q9GZZ7 299 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 XAGE1AQ9HD64 81 aa3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 MRPL35Q9NZE8 188 aaKnown RBP3.47□□□□□ -1.85
TRAPPC11-208ENST00000511955 AGRNO00468 2067 aa3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 TEX49A0A1B0GTD5 131 aa3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 TRGV3P03979 118 aa3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 EIF4EBP1Q13541 118 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 DEFB136Q30KP8 78 aa3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 RNASE13Q5GAN3 156 aaKnown RBP3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 TNCP24821 2201 aa3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 FBN3Q75N90 2809 aa3.46□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV3-49A0A0A0MS15 119 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 E7EUB6 86 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 K7ERS5 55 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 GNRH2O43555 120 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 NDUFA3O95167 84 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 ZNF575Q86XF7 245 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 NDUFA11Q86Y39 141 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 RPP21Q9H633 154 aaKnown RBP3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 S4R3C0 116 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 SFTA2Q6UW10 78 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 FAM223AQ8IWN6 122 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 TMEM190Q8WZ59 177 aa3.45□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV3-21A0A0B4J1V1 117 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV3-23P01764 117 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 RPL28P46779 137 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 MRGPRG-AS1Q2M3A8 158 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 KRTAP21-3Q3LHN1 58 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 C20orf203Q8NBC4 194 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 KLHL30-AS1Q8NEE0 82 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 A8MWP4 228 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 H7BZZ5 65 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 NDUFC1O43677 76 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 IFI27P40305 119 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 SYCNQ0VAF6 134 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 ESRGQ1W209 222 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 RNF5Q99942 180 aa3.44□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV7-4-1A0A0J9YVY3 117 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV3-30-3P0DP02 117 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 LINC01547P58512 204 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 SPANXN1Q5VSR9 72 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 C2orf82Q6UX34 121 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 Q8NBF4 154 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 TMEM167AQ8TBQ9 72 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 TMEM141Q96I45 108 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 TRAV13-2A0A0B4J235 113 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 CFC1BP0CG36 223 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 ZNF22P17026 224 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 SDIM1Q6ZPB5 146 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 Q8N814 137 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 PRO1854Q9UHT4 67 aa3.43□□□□□ -1.86
TRAPPC11-208ENST00000511955 TRBV7-1A0A0A6YYK4 115 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 A0A0B4J2C4 111 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms