RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CDC42SE2Q9NRR3 84 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 NTM-AS1Q6ZSK4 140 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 SBSPONQ8IVN8 264 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 F8P00451 2351 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 PLXNB1O43157 2135 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 C2CD3Q4AC94 2353 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 A0A087WSZ3 146 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 RNASE3P12724 160 aaKnown RBP4.17□□□□□ -1.74
USP38-203ENST00000511739 Q8N6K4 173 aa4.17□□□□□ -1.74
USP38-203ENST00000511739 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 C9orf116Q5BN46 136 aaPredicted RBP4.16□□□□□ -1.74
USP38-203ENST00000511739 C16orf90A8MZG2 172 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 MDFIQ99750 246 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 KLLNB2CW77 178 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 JMJD1CQ15652 2540 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 F8WDY8 70 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
USP38-203ENST00000511739 TANC2Q9HCD6 1990 aa4.15□□□□□ -1.74
USP38-203ENST00000511739 AVPP01185 164 aa4.15□□□□□ -1.74
USP38-203ENST00000511739 EDN2P20800 178 aa4.15□□□□□ -1.74
USP38-203ENST00000511739 CSDC2Q9Y534 153 aaKnown RBP4.15□□□□□ -1.74
USP38-203ENST00000511739 MRPS12O15235 138 aaKnown RBP4.15□□□□□ -1.75
USP38-203ENST00000511739 PRLHP81277 87 aa4.15□□□□□ -1.75
USP38-203ENST00000511739 Q8N2B8 174 aa4.15□□□□□ -1.75
USP38-203ENST00000511739 C16orf95Q9H693 158 aa4.15□□□□□ -1.75
USP38-203ENST00000511739 C7orf65Q6ZTY9 151 aa4.15□□□□□ -1.75
USP38-203ENST00000511739 CRIP1P50238 77 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 FN1P02751 2386 aaKnown RBP4.14□□□□□ -1.75
USP38-203ENST00000511739 MAPKAPK5-AS1Q8N8E1 139 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 HCG22E2RYF7 251 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 FHL3Q13643 280 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 RNASE8Q8TDE3 154 aaKnown RBP4.14□□□□□ -1.75
USP38-203ENST00000511739 H0Y9P7 68 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 DEFB116Q30KQ4 102 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 PRR9Q5T870 116 aa4.14□□□□□ -1.75
USP38-203ENST00000511739 TLN1Q9Y490 2541 aaKnown RBP4.13□□□□□ -1.75
USP38-203ENST00000511739 BRCA2P51587 3418 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 LYPD5Q6UWN5 251 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 NCOR2Q9Y618 2525 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 POLR2KP53803 58 aaKnown RBP4.13□□□□□ -1.75
USP38-203ENST00000511739 FHL2Q14192 279 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 LINC00575Q6W349 94 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 CHD8Q9HCK8 2581 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 BEAN1Q3B7T3 259 aa4.13□□□□□ -1.75
USP38-203ENST00000511739 RANBP2P49792 3224 aaKnown RBP4.13□□□□□ -1.75
USP38-203ENST00000511739 Q8N814 137 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 IGLV4-60A0A075B6I1 120 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 SMCR5Q8TEV8 140 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 CRIP2P52943 208 aaPredicted RBP4.12□□□□□ -1.75
USP38-203ENST00000511739 IMUPQ9GZP8 106 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 ZNF580Q9UK33 172 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 DNAH12Q6ZR08 3092 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 PRR3P79522 188 aaKnown RBP4.12□□□□□ -1.75
USP38-203ENST00000511739 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 NRACQ8N912 160 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
USP38-203ENST00000511739 TRBV7-7A0A0K0K1E9 115 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 TP73-AS1Q9UF72 201 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 LAMA3Q16787 3333 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 CRYGAP11844 174 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 CDSNQ15517 529 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 WDR87Q6ZQQ6 2873 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 LRRK2Q5S007 2527 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 MOBPQ13875 183 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 C11orf21Q9P2W6 132 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 ACYP2P14621 99 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
USP38-203ENST00000511739 COX8CQ7Z4L0 72 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 C22orf24Q9Y442 160 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 SPTBN4Q9H254 2564 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 COX7CP15954 63 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 Q6ZRU5 148 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 SMIM1B2RUZ4 78 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 PTPRBP23467 1997 aa4.1□□□□□ -1.75
USP38-203ENST00000511739 ZNF462Q96JM2 2506 aa4.09□□□□□ -1.75
USP38-203ENST00000511739 C1orf195Q5TG92 126 aa4.09□□□□□ -1.75
USP38-203ENST00000511739 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
USP38-203ENST00000511739 IGF2RP11717 2491 aa4.09□□□□□ -1.75
USP38-203ENST00000511739 MYO9AB2RTY4 2548 aa4.09□□□□□ -1.76
USP38-203ENST00000511739 SZT2Q5T011 3432 aa4.09□□□□□ -1.76
USP38-203ENST00000511739 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
USP38-203ENST00000511739 Q6ZRP5 223 aa4.08□□□□□ -1.76
USP38-203ENST00000511739 RAI1Q7Z5J4 1906 aaPredicted RBP4.08□□□□□ -1.76
USP38-203ENST00000511739 A0A1B0GUV1 79 aa4.08□□□□□ -1.76
USP38-203ENST00000511739 A0A1B0GU69 56 aa4.08□□□□□ -1.76
USP38-203ENST00000511739 Q8N3U1 123 aa4.08□□□□□ -1.76
USP38-203ENST00000511739 C1orf64Q8NEQ6 169 aa4.08□□□□□ -1.76
USP38-203ENST00000511739 RTL8CO15255 209 aa4.07□□□□□ -1.76
USP38-203ENST00000511739 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
USP38-203ENST00000511739 PSPHP1O15172 72 aa4.07□□□□□ -1.76
USP38-203ENST00000511739 TLN2Q9Y4G6 2542 aa4.07□□□□□ -1.76
USP38-203ENST00000511739 PIEZO2Q9H5I5 2752 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms