RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
COPS4-209ENST00000511653 MANBALQ9NQG1 85 aa4.05□□□□□ -1.76
COPS4-209ENST00000511653 IGHV1-58A0A0C4DH39 117 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 A0A1W2PNN7 141 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 FAM231BA6NCW3 169 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 SDHAF1A6NFY7 115 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 TCAPO15273 167 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 NCR2O95944 276 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 BCL2P10415 239 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 CD164L2Q6UWJ8 174 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 OR5A1Q8NGJ0 315 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 RNASE7Q9H1E1 156 aaKnown RBP4.04□□□□□ -1.76
COPS4-209ENST00000511653 PRO1933Q9H354 126 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 LINC00474Q9P2X8 69 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
COPS4-209ENST00000511653 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 K7EN84 100 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 RAB4AP20338 218 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 MEF2BQ02080 365 aaPredicted RBP4.03□□□□□ -1.76
COPS4-209ENST00000511653 SYCNQ0VAF6 134 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 KRTAP7-1Q8IUC3 87 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 SMIM12Q96EX1 92 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 SNHG12Q9BXW3 62 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 IGLV4-69A0A075B6H9 119 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 H7C423 109 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 ESDP10768 282 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 ZNF25P17030 456 aaPredicted RBP4.03□□□□□ -1.76
COPS4-209ENST00000511653 PDZD11Q5EBL8 140 aa4.03□□□□□ -1.76
COPS4-209ENST00000511653 RPP21Q9H633 154 aaKnown RBP4.03□□□□□ -1.76
COPS4-209ENST00000511653 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
COPS4-209ENST00000511653 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
COPS4-209ENST00000511653 TRBV6-5A0A0K0K1A5 114 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 LOC107984640A0A0U1RRK4 108 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 TMEM250H0YL14 139 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.01□□□□□ -1.77
COPS4-209ENST00000511653 I3L3M4 83 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 PDE6DO43924 150 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 PMCHP20382 165 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 C9orf116Q5BN46 136 aaPredicted RBP4.01□□□□□ -1.77
COPS4-209ENST00000511653 RNASE13Q5GAN3 156 aaKnown RBP4.01□□□□□ -1.77
COPS4-209ENST00000511653 C1orf137Q5JT78 98 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 NUP35Q8NFH5 326 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 MRAP2Q96G30 205 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 TMEM101Q96IK0 257 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 BTF3L4Q96K17 158 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 IMMP2LQ96T52 175 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 NAT8Q9UHE5 227 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 PKIGQ9Y2B9 76 aa4.01□□□□□ -1.77
COPS4-209ENST00000511653 DLEU1O43261 78 aa4□□□□□ -1.77
COPS4-209ENST00000511653 MT-ND6P03923 174 aa4□□□□□ -1.77
COPS4-209ENST00000511653 LINC00614P0C842 121 aa4□□□□□ -1.77
COPS4-209ENST00000511653 RPL23P62829 140 aaKnown RBP4□□□□□ -1.77
COPS4-209ENST00000511653 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
COPS4-209ENST00000511653 SS18Q15532 418 aa4□□□□□ -1.77
COPS4-209ENST00000511653 M0R143 59 aa4□□□□□ -1.77
COPS4-209ENST00000511653 APOMO95445 188 aa4□□□□□ -1.77
COPS4-209ENST00000511653 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
COPS4-209ENST00000511653 RIGQ13278 110 aa4□□□□□ -1.77
COPS4-209ENST00000511653 ZC2HC1BQ5TFG8 222 aa4□□□□□ -1.77
COPS4-209ENST00000511653 TEX43Q6ZNM6 134 aa4□□□□□ -1.77
COPS4-209ENST00000511653 Q8NBF4 154 aa4□□□□□ -1.77
COPS4-209ENST00000511653 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
COPS4-209ENST00000511653 OPRPNQ99935 248 aaPredicted RBP4□□□□□ -1.77
COPS4-209ENST00000511653 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 FAM168BA1KXE4 195 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 COX7A2LO14548 114 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 Q6ZUT4 128 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 SMIM15Q7Z3B0 74 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 C5orf38Q86SI9 138 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 SMIM7Q9BQ49 75 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 ST20Q9HBF5 79 aa3.99□□□□□ -1.77
COPS4-209ENST00000511653 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 TRBV27A0A0K0K1C4 114 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 IGLV7-43P04211 117 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 KRTAP1-4P0C5Y4 121 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 CEBPGP53567 150 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 SPAG11BQ08648 103 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 TMEM241Q24JQ0 296 aa3.98□□□□□ -1.77
COPS4-209ENST00000511653 H0Y9J4 135 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 ADIRFQ15847 76 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 AMN1Q8IY45 258 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 DIRC1Q969H9 104 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 UBE2D4Q9Y2X8 147 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 TRAV9-1A0A075B6T8 112 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 FAM231DQ6ZW35 169 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 FAM19A5Q7Z5A7 132 aaPredicted RBP3.97□□□□□ -1.77
COPS4-209ENST00000511653 FAM104AQ969W3 186 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 MIEN1Q9BRT3 115 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 TMEM191AQ9H0A3 160 aa3.97□□□□□ -1.77
COPS4-209ENST00000511653 A0A1B0GUT8 65 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 KRTAP16-1A8MUX0 517 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 HIGD1CA8MV81 97 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 A8MWL6 223 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 NUPR1O60356 82 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 G0S2P27469 103 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms