RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 KDM5DQ9BY66 1539 aa1.19□□□□□ -2.22
CHD1-205ENST00000508756 ARHGEF12Q9NZN5 1544 aa1.19□□□□□ -2.22
CHD1-205ENST00000508756 ABCA6Q8N139 1617 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 NCOA2Q15596 1464 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 IQSEC2Q5JU85 1478 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 LRRC9Q6ZRR7 1453 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 LRRC37A2A6NM11 1700 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 TMEM263Q8WUH6 116 aaKnown RBP1.18□□□□□ -2.22
CHD1-205ENST00000508756 PSENENQ9NZ42 101 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 CROCC2H7BZ55 1655 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 C3P01024 1663 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 DUOX2Q9NRD8 1548 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 KDM3BQ7LBC6 1761 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 RNF17Q9BXT8 1623 aaKnown RBP1.18□□□□□ -2.22
CHD1-205ENST00000508756 PTPN23Q9H3S7 1636 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 NLRP1Q9C000 1473 aa1.18□□□□□ -2.22
CHD1-205ENST00000508756 POLR1AO95602 1720 aaPredicted RBP1.18□□□□□ -2.22
CHD1-205ENST00000508756 ZFHX3Q15911 3703 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 CLTCQ00610 1675 aaKnown RBP1.17□□□□□ -2.22
CHD1-205ENST00000508756 LMTK2Q8IWU2 1503 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 F8WEM9 126 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 PYY3Q5JQD4 70 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 DEFB107AQ8IZN7 70 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 LINC01600Q96MT4 127 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 DEPDC5O75140 1603 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 MYO3AQ8NEV4 1616 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 CACNA1CQ13936 2221 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 UGGT1Q9NYU2 1555 aa1.17□□□□□ -2.22
CHD1-205ENST00000508756 CEP170BQ9Y4F5 1589 aaPredicted RBP1.17□□□□□ -2.22
CHD1-205ENST00000508756 GCC2Q8IWJ2 1684 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 CPS1P31327 1500 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 PVALEFA0A1B0GWK0 134 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 K7EP34 96 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 COX6A2Q02221 97 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 MED14O60244 1454 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 UNC13BO14795 1591 aa1.16□□□□□ -2.22
CHD1-205ENST00000508756 EDC4Q6P2E9 1401 aaKnown RBP1.15□□□□□ -2.22
CHD1-205ENST00000508756 RRBP1Q9P2E9 1410 aaKnown RBP1.15□□□□□ -2.22
CHD1-205ENST00000508756 ANKRD50Q9ULJ7 1429 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 ABCC3O15438 1527 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 SLIT1O75093 1534 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 EFCAB6Q5THR3 1501 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 IQGAP3Q86VI3 1631 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 MROH1Q8NDA8 1641 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 UBR1Q8IWV7 1749 aa1.15□□□□□ -2.22
CHD1-205ENST00000508756 ARMS2P0C7Q2 107 aa1.15□□□□□ -2.23
CHD1-205ENST00000508756 ERVK-7P63135 1459 aa1.15□□□□□ -2.23
CHD1-205ENST00000508756 DIP2AQ14689 1571 aa1.15□□□□□ -2.23
CHD1-205ENST00000508756 IQGAP1P46940 1657 aa1.15□□□□□ -2.23
CHD1-205ENST00000508756 ZNF469Q96JG9 3925 aaPredicted RBP1.15□□□□□ -2.23
CHD1-205ENST00000508756 LAMC1P11047 1609 aa1.15□□□□□ -2.23
CHD1-205ENST00000508756 HFM1A2PYH4 1435 aa1.15□□□□□ -2.23
CHD1-205ENST00000508756 NWD1Q149M9 1564 aa1.14□□□□□ -2.23
CHD1-205ENST00000508756 NKTRP30414 1462 aaKnown RBP1.14□□□□□ -2.23
CHD1-205ENST00000508756 CYB5AP00167 134 aa1.14□□□□□ -2.23
CHD1-205ENST00000508756 S100A16Q96FQ6 103 aaKnown RBP1.14□□□□□ -2.23
CHD1-205ENST00000508756 KNDC1Q76NI1 1749 aa1.14□□□□□ -2.23
CHD1-205ENST00000508756 TMEM131LA2VDJ0 1609 aa1.14□□□□□ -2.23
CHD1-205ENST00000508756 PIK3C2BO00750 1634 aa1.14□□□□□ -2.23
CHD1-205ENST00000508756 TRPM2O94759 1503 aa1.14□□□□□ -2.23
CHD1-205ENST00000508756 RGPD4Q7Z3J3 1758 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 SETBP1Q9Y6X0 1596 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 NUP188Q5SRE5 1749 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 TDRG1Q3Y452 100 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 ETDBQ3ZM63 59 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 SPATA8Q6RVD6 105 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 DNAJC13O75165 2243 aa1.13□□□□□ -2.23
CHD1-205ENST00000508756 C1orf167Q5SNV9 1468 aa1.12□□□□□ -2.23
CHD1-205ENST00000508756 PPLO60437 1756 aa1.12□□□□□ -2.23
CHD1-205ENST00000508756 NEXMIFQ5QGS0 1516 aa1.12□□□□□ -2.23
CHD1-205ENST00000508756 LRRC7Q96NW7 1537 aa1.12□□□□□ -2.23
CHD1-205ENST00000508756 ZNF720Q7Z2F6 126 aa1.12□□□□□ -2.23
CHD1-205ENST00000508756 SHPRHQ149N8 1683 aa1.12□□□□□ -2.23
CHD1-205ENST00000508756 XRN1Q8IZH2 1706 aaKnown RBP1.12□□□□□ -2.23
CHD1-205ENST00000508756 CLTCL1P53675 1640 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 NHSL1Q5SYE7 1610 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 ALKQ9UM73 1620 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 NRXN3Q9Y4C0 1643 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 KIF1AQ12756 1690 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 LEPROTL1O95214 131 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 ANKARQ7Z5J8 1434 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 CDC42BPGQ6DT37 1551 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 ITSN1Q15811 1721 aa1.11□□□□□ -2.23
CHD1-205ENST00000508756 RGPD3A6NKT7 1758 aaPredicted RBP1.11□□□□□ -2.23
CHD1-205ENST00000508756 ASXL1Q8IXJ9 1541 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 FMN2Q9NZ56 1722 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 TRBV6-1A0A0K0K1D8 114 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 S100A3P33764 101 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 LINC00846Q9NV44 126 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 PRO0255Q9UI72 69 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 ATP7BP35670 1465 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 TULP4Q9NRJ4 1543 aa1.1□□□□□ -2.23
CHD1-205ENST00000508756 MYH4Q9Y623 1939 aa1.09□□□□□ -2.23
CHD1-205ENST00000508756 PEA15Q15121 130 aa1.09□□□□□ -2.23
CHD1-205ENST00000508756 ABCC6O95255 1503 aa1.09□□□□□ -2.24
CHD1-205ENST00000508756 COL14A1Q05707 1796 aaKnown RBP1.08□□□□□ -2.24
CHD1-205ENST00000508756 CACNA1HO95180 2353 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 USP32Q8NFA0 1604 aa1.08□□□□□ -2.24
CHD1-205ENST00000508756 ALS2Q96Q42 1657 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms