RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 RGPD5Q99666 1765 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 C1orf167Q5SNV9 1468 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 BTAF1O14981 1849 aa1.87□□□□□ -2.11
GYPA-205ENST00000508337 PDCD11Q14690 1871 aaKnown RBP1.86□□□□□ -2.11
GYPA-205ENST00000508337 A0A0D9SFI3 127 aa1.86□□□□□ -2.11
GYPA-205ENST00000508337 Q6ZRX8 168 aa1.86□□□□□ -2.11
GYPA-205ENST00000508337 PREX2Q70Z35 1606 aa1.86□□□□□ -2.11
GYPA-205ENST00000508337 LAMA4Q16363 1823 aa1.86□□□□□ -2.11
GYPA-205ENST00000508337 MYO7BQ6PIF6 2116 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 ADGRB2O60241 1585 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 PLXNC1O60486 1568 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 DIP2AQ14689 1571 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 DNAJC13O75165 2243 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 SNRPGP15A8MWD9 76 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 FCER1GP30273 86 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 ATP7BP35670 1465 aa1.85□□□□□ -2.11
GYPA-205ENST00000508337 URB2Q14146 1524 aaKnown RBP1.85□□□□□ -2.11
GYPA-205ENST00000508337 TARBP1Q13395 1621 aaKnown RBP1.84□□□□□ -2.11
GYPA-205ENST00000508337 SCN7AQ01118 1682 aa1.84□□□□□ -2.11
GYPA-205ENST00000508337 A0A1B0GU69 56 aa1.84□□□□□ -2.11
GYPA-205ENST00000508337 NCR3O14931 201 aa1.84□□□□□ -2.11
GYPA-205ENST00000508337 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.84□□□□□ -2.11
GYPA-205ENST00000508337 SSBP3-AS1Q7Z2R9 100 aa1.84□□□□□ -2.11
GYPA-205ENST00000508337 CDC42BPGQ6DT37 1551 aa1.84□□□□□ -2.12
GYPA-205ENST00000508337 ZNF236Q9UL36 1845 aa1.84□□□□□ -2.12
GYPA-205ENST00000508337 CD163L1Q9NR16 1453 aa1.83□□□□□ -2.12
GYPA-205ENST00000508337 ARFGEF2Q9Y6D5 1785 aa1.83□□□□□ -2.12
GYPA-205ENST00000508337 TNRC6BQ9UPQ9 1833 aaKnown RBP1.83□□□□□ -2.12
GYPA-205ENST00000508337 KRTAP21-3Q3LHN1 58 aa1.83□□□□□ -2.12
GYPA-205ENST00000508337 ENHOQ6UWT2 76 aa1.83□□□□□ -2.12
GYPA-205ENST00000508337 ABCA9Q8IUA7 1624 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 GVQW2A0A096LPI5 108 aaPredicted RBP1.82□□□□□ -2.12
GYPA-205ENST00000508337 TRBV6-1A0A0K0K1D8 114 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 LY6G6CO95867 125 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 UNQ6190/PRO20217Q6UXQ8 127 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 SMIM11BQ8TCY0 68 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 MUC6Q6W4X9 2439 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 RGPD1P0DJD0 1748 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 ICE1Q9Y2F5 2266 aa1.82□□□□□ -2.12
GYPA-205ENST00000508337 TIAM1Q13009 1591 aa1.81□□□□□ -2.12
GYPA-205ENST00000508337 CCDC180Q9P1Z9 1646 aa1.81□□□□□ -2.12
GYPA-205ENST00000508337 LINC00959A0A1B0GUT2 108 aa1.81□□□□□ -2.12
GYPA-205ENST00000508337 CEP170BQ9Y4F5 1589 aaPredicted RBP1.81□□□□□ -2.12
GYPA-205ENST00000508337 LRP6O75581 1613 aa1.8□□□□□ -2.12
GYPA-205ENST00000508337 ITSN1Q15811 1721 aa1.8□□□□□ -2.12
GYPA-205ENST00000508337 A0A096LNT2 108 aa1.8□□□□□ -2.12
GYPA-205ENST00000508337 G3V318 75 aa1.8□□□□□ -2.12
GYPA-205ENST00000508337 C10orf99Q6UWK7 81 aa1.8□□□□□ -2.12
GYPA-205ENST00000508337 PHRF1Q9P1Y6 1649 aaKnown RBP1.8□□□□□ -2.12
GYPA-205ENST00000508337 NCBP2-AS2Q69YL0 99 aa1.79□□□□□ -2.12
GYPA-205ENST00000508337 CPS1P31327 1500 aa1.79□□□□□ -2.12
GYPA-205ENST00000508337 INTS1Q8N201 2190 aaKnown RBP1.78□□□□□ -2.12
GYPA-205ENST00000508337 LOC285556D6RIA3 1793 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 PIK3C2BO00750 1634 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 RAPGEF6Q8TEU7 1601 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 GLI2P10070 1586 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 K7EMI3 77 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 PRH1P02810 166 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 SPINK13Q1W4C9 94 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 UBL5Q9BZL1 73 aa1.78□□□□□ -2.12
GYPA-205ENST00000508337 SORL1Q92673 2214 aa1.78□□□□□ -2.13
GYPA-205ENST00000508337 CLASP1Q7Z460 1538 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 FANCD2Q9BXW9 1451 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 ANKRD50Q9ULJ7 1429 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 MED13LQ71F56 2210 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 ARL14EPLP0DKL9 152 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 XRN1Q8IZH2 1706 aaKnown RBP1.77□□□□□ -2.13
GYPA-205ENST00000508337 IFT172Q9UG01 1749 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 COL4A1P02462 1669 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 SHPRHQ149N8 1683 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 PREX1Q8TCU6 1659 aa1.77□□□□□ -2.13
GYPA-205ENST00000508337 MYO7AQ13402 2215 aa1.76□□□□□ -2.13
GYPA-205ENST00000508337 NDUFA4O00483 81 aa1.76□□□□□ -2.13
GYPA-205ENST00000508337 COX7BP24311 80 aa1.76□□□□□ -2.13
GYPA-205ENST00000508337 SIPA1L3O60292 1781 aaPredicted RBP1.76□□□□□ -2.13
GYPA-205ENST00000508337 ABCA1O95477 2261 aa1.76□□□□□ -2.13
GYPA-205ENST00000508337 SAMD9Q5K651 1589 aa1.76□□□□□ -2.13
GYPA-205ENST00000508337 LCE6AA0A183 80 aa1.75□□□□□ -2.13
GYPA-205ENST00000508337 PIN1P1O15428 100 aa1.75□□□□□ -2.13
GYPA-205ENST00000508337 LINC00575Q6W349 94 aa1.75□□□□□ -2.13
GYPA-205ENST00000508337 USP32Q8NFA0 1604 aa1.75□□□□□ -2.13
GYPA-205ENST00000508337 LRRC7Q96NW7 1537 aa1.75□□□□□ -2.13
GYPA-205ENST00000508337 MAP2P11137 1827 aaKnown RBP1.75□□□□□ -2.13
GYPA-205ENST00000508337 NCOA6Q14686 2063 aaPredicted RBP1.75□□□□□ -2.13
GYPA-205ENST00000508337 CACNA1GO43497 2377 aa1.74□□□□□ -2.13
GYPA-205ENST00000508337 PAPPAQ13219 1627 aa1.74□□□□□ -2.13
GYPA-205ENST00000508337 NHSL1Q5SYE7 1610 aa1.74□□□□□ -2.13
GYPA-205ENST00000508337 RNF17Q9BXT8 1623 aaKnown RBP1.74□□□□□ -2.13
GYPA-205ENST00000508337 PRB1P04280 392 aa1.74□□□□□ -2.13
GYPA-205ENST00000508337 TOMM5Q8N4H5 51 aa1.74□□□□□ -2.13
GYPA-205ENST00000508337 CRYBG1Q9Y4K1 1723 aa1.74□□□□□ -2.13
GYPA-205ENST00000508337 ABCA6Q8N139 1617 aa1.73□□□□□ -2.13
GYPA-205ENST00000508337 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
GYPA-205ENST00000508337 UBE2DNLQ8IWF7 75 aa1.73□□□□□ -2.13
GYPA-205ENST00000508337 FMN2Q9NZ56 1722 aa1.73□□□□□ -2.13
GYPA-205ENST00000508337 LAMC1P11047 1609 aa1.73□□□□□ -2.13
GYPA-205ENST00000508337 KIF1AQ12756 1690 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms