RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	TRBV30	A0A0K0K1B3	111 aa		5.81	□□□□□ -1.48
UBE2D3-223	ENST00000508249	PRSS2	P07478	247 aa		5.81	□□□□□ -1.48
UBE2D3-223	ENST00000508249	TLX1NB	P0CAT3	122 aa		5.81	□□□□□ -1.48
UBE2D3-223	ENST00000508249	MAJIN	Q3KP22	176 aa		5.81	□□□□□ -1.48
UBE2D3-223	ENST00000508249		Q8IZM0	81 aa		5.81	□□□□□ -1.48
UBE2D3-223	ENST00000508249		H3BRM9	83 aa		5.8	□□□□□ -1.48
UBE2D3-223	ENST00000508249	PTTG1IP	P53801	180 aa		5.8	□□□□□ -1.48
UBE2D3-223	ENST00000508249	PDZD11	Q5EBL8	140 aa		5.8	□□□□□ -1.48
UBE2D3-223	ENST00000508249	C7orf33	Q8WU49	177 aa		5.8	□□□□□ -1.48
UBE2D3-223	ENST00000508249	LINC00526	Q96FQ7	95 aa		5.8	□□□□□ -1.48
UBE2D3-223	ENST00000508249	CST9L	Q9H4G1	147 aa		5.8	□□□□□ -1.48
UBE2D3-223	ENST00000508249		A0A096LNI7	61 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249		A0A096LNJ9	63 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249	IGKV2-24	A0A0C4DH68	120 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249	CKS1B	P61024	79 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249	KIAA0087	Q14695	138 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249	LINC00469	Q8N7U9	141 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249	STPG4	Q8N801	248 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249	URB1-AS1	Q96HZ7	61 aa		5.79	□□□□□ -1.48
UBE2D3-223	ENST00000508249		A0A0J9YXV3	536 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	HSBP1	O75506	76 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	CHTF8	P0CG12	524 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	IGLC3	P0DOY3	106 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	C6orf226	Q5I0X4	101 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	LCE2A	Q5TA79	106 aa	Predicted RBP	5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	ZC2HC1B	Q5TFG8	222 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	BAGE3	Q86Y29	109 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	CDKN2A-AS1	Q9UH64	79 aa		5.78	□□□□□ -1.48
UBE2D3-223	ENST00000508249	TRGC2	P03986	189 aa		5.77	□□□□□ -1.49
UBE2D3-223	ENST00000508249	RPL18A	Q02543	176 aa	Known RBP	5.77	□□□□□ -1.49
UBE2D3-223	ENST00000508249	GAGE2B	Q13066	116 aa		5.77	□□□□□ -1.49
UBE2D3-223	ENST00000508249	SFTA2	Q6UW10	78 aa		5.77	□□□□□ -1.49
UBE2D3-223	ENST00000508249	TOMM7	Q9P0U1	55 aa		5.77	□□□□□ -1.49
UBE2D3-223	ENST00000508249	C6orf48	Q9UBA6	75 aa		5.77	□□□□□ -1.49
UBE2D3-223	ENST00000508249	TRAV12-1	A0A0B4J245	112 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249	COLCA2	A8K830	154 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249	SMIM1	B2RUZ4	78 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249	NDUFC2-KCTD14	E9PQ53	114 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249		F8VRH5	84 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249	LINC01600	Q96MT4	127 aa		5.76	□□□□□ -1.49
UBE2D3-223	ENST00000508249	NDUFA6	P56556	154 aa		5.75	□□□□□ -1.49
UBE2D3-223	ENST00000508249	COX7B2	Q8TF08	81 aa		5.75	□□□□□ -1.49
UBE2D3-223	ENST00000508249	IFI27L1	Q96BM0	104 aa		5.75	□□□□□ -1.49
UBE2D3-223	ENST00000508249	KRTAP10-8	P60410	259 aa		5.74	□□□□□ -1.49
UBE2D3-223	ENST00000508249	PMCHL1	Q16048	86 aa		5.74	□□□□□ -1.49
UBE2D3-223	ENST00000508249	C10orf25	Q5T742	122 aa		5.74	□□□□□ -1.49
UBE2D3-223	ENST00000508249	HSPB8	Q9UJY1	196 aa		5.74	□□□□□ -1.49
UBE2D3-223	ENST00000508249	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.74	□□□□□ -1.49
UBE2D3-223	ENST00000508249	IGLV5-39	A0A0G2JS06	123 aa		5.73	□□□□□ -1.49
UBE2D3-223	ENST00000508249	LEPROTL1	O95214	131 aa		5.73	□□□□□ -1.49
UBE2D3-223	ENST00000508249	ZNF22	P17026	224 aa	Predicted RBP	5.73	□□□□□ -1.49
UBE2D3-223	ENST00000508249	C9orf116	Q5BN46	136 aa	Predicted RBP	5.73	□□□□□ -1.49
UBE2D3-223	ENST00000508249	C2orf82	Q6UX34	121 aa		5.73	□□□□□ -1.49
UBE2D3-223	ENST00000508249		Q6ZRP5	223 aa		5.73	□□□□□ -1.49
UBE2D3-223	ENST00000508249	SERF1A	O75920	110 aa		5.72	□□□□□ -1.49
UBE2D3-223	ENST00000508249	SPINK8	P0C7L1	97 aa		5.72	□□□□□ -1.49
UBE2D3-223	ENST00000508249	C11orf86	A6NJI1	115 aa		5.71	□□□□□ -1.5
UBE2D3-223	ENST00000508249	GAGE2E	Q4V326	116 aa		5.71	□□□□□ -1.5
UBE2D3-223	ENST00000508249	TMEM170B	Q5T4T1	132 aa		5.71	□□□□□ -1.5
UBE2D3-223	ENST00000508249	GAGE2D	Q9UEU5	116 aa		5.71	□□□□□ -1.5
UBE2D3-223	ENST00000508249		A0A1W2PNN7	141 aa		5.7	□□□□□ -1.5
UBE2D3-223	ENST00000508249	S100A1	P23297	94 aa		5.7	□□□□□ -1.5
UBE2D3-223	ENST00000508249	PRR3	P79522	188 aa	Known RBP	5.7	□□□□□ -1.5
UBE2D3-223	ENST00000508249	COX17	Q14061	63 aa		5.7	□□□□□ -1.5
UBE2D3-223	ENST00000508249	FAM19A2	Q8N3H0	131 aa		5.7	□□□□□ -1.5
UBE2D3-223	ENST00000508249	PLN	P26678	52 aa		5.69	□□□□□ -1.5
UBE2D3-223	ENST00000508249	LINC00310	P59036	64 aa		5.69	□□□□□ -1.5
UBE2D3-223	ENST00000508249	LBH	Q53QV2	105 aa	Predicted RBP	5.69	□□□□□ -1.5
UBE2D3-223	ENST00000508249	TP73-AS1	Q9UF72	201 aa		5.69	□□□□□ -1.5
UBE2D3-223	ENST00000508249	TMEM223	A0PJW6	202 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	LINC00587	B1AMM8	73 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249		M0QXV9	152 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BK	O60814	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BJ	P06899	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BO	P23527	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BB	P33778	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BD	P58876	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BC	P62807	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST2H2BE	Q16778	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	SPINK6	Q6UWN8	80 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BH	Q93079	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BN	Q99877	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HIST1H2BM	Q99879	126 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	MAP1LC3C	Q9BXW4	147 aa		5.68	□□□□□ -1.5
UBE2D3-223	ENST00000508249	SCO1	O75880	301 aa		5.67	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HERVK_113	P61574	105 aa		5.67	□□□□□ -1.5
UBE2D3-223	ENST00000508249	C9orf129	Q5T035	196 aa	Known RBP	5.67	□□□□□ -1.5
UBE2D3-223	ENST00000508249	REG3G	Q6UW15	175 aa		5.67	□□□□□ -1.5
UBE2D3-223	ENST00000508249	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.67	□□□□□ -1.5
UBE2D3-223	ENST00000508249	DPM2	O94777	84 aa		5.66	□□□□□ -1.5
UBE2D3-223	ENST00000508249	HERV-K104	P63124	156 aa		5.66	□□□□□ -1.5
UBE2D3-223	ENST00000508249	UBE2B	P63146	152 aa		5.66	□□□□□ -1.5
UBE2D3-223	ENST00000508249	COA6	Q5JTJ3	125 aa	Known RBP	5.66	□□□□□ -1.5
UBE2D3-223	ENST00000508249	PHF5A	Q7RTV0	110 aa	Known RBP	5.66	□□□□□ -1.5
UBE2D3-223	ENST00000508249	ERG28	Q9UKR5	140 aa		5.66	□□□□□ -1.5
UBE2D3-223	ENST00000508249	IGLV5-37	A0A075B6J1	123 aa		5.65	□□□□□ -1.5
UBE2D3-223	ENST00000508249	FAM168B	A1KXE4	195 aa		5.65	□□□□□ -1.5
UBE2D3-223	ENST00000508249	NUPR1	O60356	82 aa		5.65	□□□□□ -1.5

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