RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 PMCHL1Q16048 86 aa11.27□□□□□ -0.61
SSBP2-208ENST00000507655 PDZD11Q5EBL8 140 aa11.27□□□□□ -0.61
SSBP2-208ENST00000507655 Q6ZRP5 223 aa11.27□□□□□ -0.61
SSBP2-208ENST00000507655 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.61
SSBP2-208ENST00000507655 PACRGQ96M98 296 aaPredicted RBP11.27□□□□□ -0.61
SSBP2-208ENST00000507655 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.61
SSBP2-208ENST00000507655 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
SSBP2-208ENST00000507655 LRP1Q07954 4544 aaKnown RBP11.26□□□□□ -0.61
SSBP2-208ENST00000507655 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
SSBP2-208ENST00000507655 C6orf226Q5I0X4 101 aa11.25□□□□□ -0.61
SSBP2-208ENST00000507655 FAT3Q8TDW7 4589 aa11.25□□□□□ -0.61
SSBP2-208ENST00000507655 CKS1BP61024 79 aa11.24□□□□□ -0.61
SSBP2-208ENST00000507655 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
SSBP2-208ENST00000507655 CHCHD1Q96BP2 118 aaKnown RBP11.24□□□□□ -0.61
SSBP2-208ENST00000507655 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
SSBP2-208ENST00000507655 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
SSBP2-208ENST00000507655 ATP5LO75964 103 aa11.22□□□□□ -0.61
SSBP2-208ENST00000507655 OXTP01178 125 aa11.22□□□□□ -0.61
SSBP2-208ENST00000507655 TRGC2P03986 189 aa11.21□□□□□ -0.61
SSBP2-208ENST00000507655 CXCL5P42830 114 aa11.21□□□□□ -0.61
SSBP2-208ENST00000507655 NDUFA6P56556 154 aa11.21□□□□□ -0.61
SSBP2-208ENST00000507655 GAGE2EQ4V326 116 aa11.21□□□□□ -0.61
SSBP2-208ENST00000507655 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.61
SSBP2-208ENST00000507655 F8VRH5 84 aa11.2□□□□□ -0.62
SSBP2-208ENST00000507655 J3QL48 77 aa11.2□□□□□ -0.62
SSBP2-208ENST00000507655 SPINK8P0C7L1 97 aa11.2□□□□□ -0.62
SSBP2-208ENST00000507655 HERC1Q15751 4861 aa11.2□□□□□ -0.62
SSBP2-208ENST00000507655 FAM168BA1KXE4 195 aa11.19□□□□□ -0.62
SSBP2-208ENST00000507655 H3BRM9 83 aa11.19□□□□□ -0.62
SSBP2-208ENST00000507655 COX7B2Q8TF08 81 aa11.19□□□□□ -0.62
SSBP2-208ENST00000507655 COLCA2A8K830 154 aa11.18□□□□□ -0.62
SSBP2-208ENST00000507655 ZNF22P17026 224 aaPredicted RBP11.18□□□□□ -0.62
SSBP2-208ENST00000507655 PHF5AQ7RTV0 110 aaKnown RBP11.18□□□□□ -0.62
SSBP2-208ENST00000507655 C9orf129Q5T035 196 aaKnown RBP11.17□□□□□ -0.62
SSBP2-208ENST00000507655 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
SSBP2-208ENST00000507655 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
SSBP2-208ENST00000507655 IGLV5-39A0A0G2JS06 123 aa11.16□□□□□ -0.62
SSBP2-208ENST00000507655 HSBP1O75506 76 aa11.15□□□□□ -0.62
SSBP2-208ENST00000507655 C11orf86A6NJI1 115 aa11.14□□□□□ -0.63
SSBP2-208ENST00000507655 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
SSBP2-208ENST00000507655 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
SSBP2-208ENST00000507655 PSORS1C2Q9UIG4 136 aa11.14□□□□□ -0.63
SSBP2-208ENST00000507655 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
SSBP2-208ENST00000507655 LINC00310P59036 64 aa11.13□□□□□ -0.63
SSBP2-208ENST00000507655 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
SSBP2-208ENST00000507655 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
SSBP2-208ENST00000507655 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
SSBP2-208ENST00000507655 M0QXV9 152 aa11.11□□□□□ -0.63
SSBP2-208ENST00000507655 SERF1AO75920 110 aa11.11□□□□□ -0.63
SSBP2-208ENST00000507655 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
SSBP2-208ENST00000507655 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
SSBP2-208ENST00000507655 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
SSBP2-208ENST00000507655 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
SSBP2-208ENST00000507655 SCO1O75880 301 aa11.08□□□□□ -0.64
SSBP2-208ENST00000507655 ODF1Q14990 250 aa11.08□□□□□ -0.64
SSBP2-208ENST00000507655 SERTAD4-AS1Q5TG53 156 aa11.08□□□□□ -0.64
SSBP2-208ENST00000507655 NUPR1O60356 82 aa11.07□□□□□ -0.64
SSBP2-208ENST00000507655 MT1HL1P0DM35 61 aa11.07□□□□□ -0.64
SSBP2-208ENST00000507655 C1orf137Q5JT78 98 aa11.07□□□□□ -0.64
SSBP2-208ENST00000507655 LEPROTL1O95214 131 aa11.06□□□□□ -0.64
SSBP2-208ENST00000507655 TNXBP22105 4242 aa11.05□□□□□ -0.64
SSBP2-208ENST00000507655 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
SSBP2-208ENST00000507655 C22orf24Q9Y442 160 aa11.05□□□□□ -0.64
SSBP2-208ENST00000507655 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
SSBP2-208ENST00000507655 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
SSBP2-208ENST00000507655 PLA2G2DQ9UNK4 145 aa11.04□□□□□ -0.64
SSBP2-208ENST00000507655 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
SSBP2-208ENST00000507655 UBE2BP63146 152 aa11.03□□□□□ -0.64
SSBP2-208ENST00000507655 ZNF625Q96I27 306 aaPredicted RBP11.03□□□□□ -0.64
SSBP2-208ENST00000507655 LINC01600Q96MT4 127 aa11.03□□□□□ -0.64
SSBP2-208ENST00000507655 COX17Q14061 63 aa11.02□□□□□ -0.65
SSBP2-208ENST00000507655 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
SSBP2-208ENST00000507655 ERG28Q9UKR5 140 aa11.02□□□□□ -0.65
SSBP2-208ENST00000507655 PFN2P35080 140 aa11.01□□□□□ -0.65
SSBP2-208ENST00000507655 HSPB8Q9UJY1 196 aa11.01□□□□□ -0.65
SSBP2-208ENST00000507655 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 H0Y8G0 127 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BKO60814 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BJP06899 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BOP23527 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BBP33778 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BDP58876 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BCP62807 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
SSBP2-208ENST00000507655 MRPL55Q7Z7F7 128 aaKnown RBP11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
SSBP2-208ENST00000507655 FABP4P15090 132 aa10.99□□□□□ -0.65
SSBP2-208ENST00000507655 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
SSBP2-208ENST00000507655 DIRC1Q969H9 104 aa10.96□□□□□ -0.65
SSBP2-208ENST00000507655 PLNP26678 52 aa10.95□□□□□ -0.66
SSBP2-208ENST00000507655 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
SSBP2-208ENST00000507655 H0Y9J4 135 aa10.94□□□□□ -0.66
SSBP2-208ENST00000507655 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
SSBP2-208ENST00000507655 DPM2O94777 84 aa10.93□□□□□ -0.66
SSBP2-208ENST00000507655 VPREB1P12018 145 aa10.93□□□□□ -0.66
SSBP2-208ENST00000507655 NKAPP1Q8N9T2 125 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms