RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 USP9YO00507 2555 aaPredicted RBP1.52□□□□□ -2.17
NEDD4-205ENST00000506154 XP32Q5T750 250 aa1.52□□□□□ -2.17
NEDD4-205ENST00000506154 SMIM2Q9BVW6 85 aa1.52□□□□□ -2.17
NEDD4-205ENST00000506154 TRBV6-5A0A0K0K1A5 114 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 PCBD1P61457 104 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 BLCAPP62952 87 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 DEFB114Q30KQ6 69 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 NPBQ8NG41 125 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 HELZ2Q9BYK8 2649 aaKnown RBP1.51□□□□□ -2.17
NEDD4-205ENST00000506154 PSCAO43653 123 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 ZNF32P17041 273 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 Q8N9P0 234 aaPredicted RBP1.51□□□□□ -2.17
NEDD4-205ENST00000506154 ZNF702PQ9H963 129 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 PTPRQQ9UMZ3 2332 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 ABCA12Q86UK0 2595 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 TRAV8-3A0A0A6YYJ7 113 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 KPRPQ5T749 579 aaPredicted RBP1.51□□□□□ -2.17
NEDD4-205ENST00000506154 SND1-IT1Q9HBX3 110 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 KRTAP15-1Q3LI76 137 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 S100A7L2Q5SY68 101 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 C20orf197Q8N268 126 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 C16orf74Q96GX8 76 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 Q9BRP9 147 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 NDUFA4L2Q9NRX3 87 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 H3BSH0 61 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 LINC01554Q52M75 96 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 SOSTDC1Q6X4U4 206 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 CLEC2BQ92478 149 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 CDC42SE1Q9NRR8 79 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 FXYD7P58549 80 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 LUZP6Q538Z0 58 aa1.51□□□□□ -2.17
NEDD4-205ENST00000506154 IGF2RP11717 2491 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 TRAV10A0A0B4J240 114 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 TET2Q6N021 2002 aaPredicted RBP1.5□□□□□ -2.17
NEDD4-205ENST00000506154 DOCK11Q5JSL3 2073 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 F8WEM9 126 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 TMEM256-PLSCR3K7ERE1 68 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 NNATQ16517 81 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 DEFB108BQ8NET1 73 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 UBE2L6O14933 153 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 UBE2BP63146 152 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 PDE6HQ13956 83 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 FLNBO75369 2602 aaKnown RBP1.5□□□□□ -2.17
NEDD4-205ENST00000506154 LOC389332A0A1B0GUA5 103 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 LGALS3P17931 250 aaKnown RBP1.5□□□□□ -2.17
NEDD4-205ENST00000506154 KRTAP10-2P60368 255 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 KRTAP10-9P60411 292 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 TMEM254Q8TBM7 123 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 TMEM141Q96I45 108 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 MAP1AP78559 2803 aaPredicted RBP1.5□□□□□ -2.17
NEDD4-205ENST00000506154 A0A0J9YXV3 536 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
NEDD4-205ENST00000506154 MINOS1-NBL1R4GNA1 71 aa1.5□□□□□ -2.17
NEDD4-205ENST00000506154 IGLV4-3A0A075B6K6 122 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 IGLV1-51P01701 117 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV1-16P04430 117 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 LINC00612Q8N6U2 182 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 LOC100996750A0A140TA64 210 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 H3BRN7 92 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 MOBPQ13875 183 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 KRTAP4-6Q9BYQ5 205 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV3D-20A0A0C4DH25 116 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 ELOF1P60002 83 aaKnown RBP1.49□□□□□ -2.17
NEDD4-205ENST00000506154 ARFGEF3Q5TH69 2177 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 Q1RN00 199 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 PHLDA3Q9Y5J5 127 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 NCOR2Q9Y618 2525 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 RPL27AP46776 148 aaKnown RBP1.49□□□□□ -2.17
NEDD4-205ENST00000506154 C2orf66Q6UXQ4 117 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 FREM1Q5H8C1 2179 aa1.49□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV2-28A0A075B6P5 120 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV2D-28P01615 120 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 BAALC-AS2P0C853 105 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 ZNF462Q96JM2 2506 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 MP68P56378 58 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 LINC00242Q5T6M2 205 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 LCE4AQ5TA78 99 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 C1orf64Q8NEQ6 169 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 KIAA1109Q2LD37 5005 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV3OR16-12A0A075B7B8 117 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV3-20P01619 116 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 WT1-ASQ06250 92 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 Q6ZQT0 140 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 RNF5Q99942 180 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 FREM3P0C091 2139 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV3-15A0A0B4J1V0 119 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 CLPSL1A2RUU4 121 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 H3BVH4 76 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 NDUFA1O15239 70 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 KRTAP10-3P60369 221 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 LINC00269Q8N2A0 174 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 SPTBP11277 2137 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 POLEQ07864 2286 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV1-8P0DP01 117 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 TMEM167AQ8TBQ9 72 aa1.48□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV4-30-2A0A087WSY4 118 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 M0R1W7 72 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 LINC00308Q8TCZ7 52 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms