RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
TRAPPC11-204ENST00000505676 CLPSL2Q6UWE3 100 aa11.81□□□□□ -0.52
TRAPPC11-204ENST00000505676 A0A0U1RRA0 63 aa11.8□□□□□ -0.52
TRAPPC11-204ENST00000505676 CKS1BP61024 79 aa11.8□□□□□ -0.52
TRAPPC11-204ENST00000505676 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC11-204ENST00000505676 FLNBO75369 2602 aaKnown RBP11.8□□□□□ -0.52
TRAPPC11-204ENST00000505676 Q6ZTC4 211 aa11.79□□□□□ -0.52
TRAPPC11-204ENST00000505676 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
TRAPPC11-204ENST00000505676 FOXI1Q12951 378 aa11.79□□□□□ -0.52
TRAPPC11-204ENST00000505676 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
TRAPPC11-204ENST00000505676 SND1-IT1Q9HBX3 110 aa11.78□□□□□ -0.52
TRAPPC11-204ENST00000505676 A0A0J9YWU9 116 aa11.78□□□□□ -0.52
TRAPPC11-204ENST00000505676 CRPP02741 224 aa11.78□□□□□ -0.52
TRAPPC11-204ENST00000505676 LINC01620Q4KN68 170 aa11.78□□□□□ -0.52
TRAPPC11-204ENST00000505676 VPS25Q9BRG1 176 aa11.78□□□□□ -0.52
TRAPPC11-204ENST00000505676 RNF151Q2KHN1 245 aa11.77□□□□□ -0.53
TRAPPC11-204ENST00000505676 TEN1Q86WV5 123 aa11.77□□□□□ -0.53
TRAPPC11-204ENST00000505676 SLC25A20O43772 301 aa11.76□□□□□ -0.53
TRAPPC11-204ENST00000505676 SMCPP49901 116 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC11-204ENST00000505676 KIAA0087Q14695 138 aa11.76□□□□□ -0.53
TRAPPC11-204ENST00000505676 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
TRAPPC11-204ENST00000505676 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
TRAPPC11-204ENST00000505676 LST1O00453 97 aa11.75□□□□□ -0.53
TRAPPC11-204ENST00000505676 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
TRAPPC11-204ENST00000505676 C9JAW5 83 aa11.75□□□□□ -0.53
TRAPPC11-204ENST00000505676 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
TRAPPC11-204ENST00000505676 GAGE12HA6NDE8 117 aa11.74□□□□□ -0.53
TRAPPC11-204ENST00000505676 H3BT86 120 aa11.74□□□□□ -0.53
TRAPPC11-204ENST00000505676 CCL18P55774 89 aa11.74□□□□□ -0.53
TRAPPC11-204ENST00000505676 PPDPFLQ8WWR9 84 aa11.74□□□□□ -0.53
TRAPPC11-204ENST00000505676 C15orf53Q8NAA6 179 aa11.74□□□□□ -0.53
TRAPPC11-204ENST00000505676 PFN2P35080 140 aa11.73□□□□□ -0.53
TRAPPC11-204ENST00000505676 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
TRAPPC11-204ENST00000505676 IGLV10-54A0A075B6I4 117 aa11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 TRAV10A0A0B4J240 114 aa11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 RPL28P46779 137 aaKnown RBP11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 ENHOQ6UWT2 76 aa11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 Q8N3U1 123 aa11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 NDUFC2O95298 119 aa11.72□□□□□ -0.53
TRAPPC11-204ENST00000505676 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.53
TRAPPC11-204ENST00000505676 CARD19Q96LW7 228 aa11.71□□□□□ -0.53
TRAPPC11-204ENST00000505676 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.54
TRAPPC11-204ENST00000505676 SPAG11BQ08648 103 aa11.71□□□□□ -0.54
TRAPPC11-204ENST00000505676 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
TRAPPC11-204ENST00000505676 GVQW2A0A096LPI5 108 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC11-204ENST00000505676 TRRAPQ9Y4A5 3859 aa11.7□□□□□ -0.54
TRAPPC11-204ENST00000505676 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
TRAPPC11-204ENST00000505676 IGKV2-28A0A075B6P5 120 aa11.69□□□□□ -0.54
TRAPPC11-204ENST00000505676 IGKV2D-28P01615 120 aa11.69□□□□□ -0.54
TRAPPC11-204ENST00000505676 UBE2WQ96B02 151 aa11.69□□□□□ -0.54
TRAPPC11-204ENST00000505676 TRACP01848 142 aa11.68□□□□□ -0.54
TRAPPC11-204ENST00000505676 C2orf82Q6UX34 121 aa11.68□□□□□ -0.54
TRAPPC11-204ENST00000505676 F8WDY8 70 aa11.68□□□□□ -0.54
TRAPPC11-204ENST00000505676 K7EIL1 84 aa11.68□□□□□ -0.54
TRAPPC11-204ENST00000505676 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
TRAPPC11-204ENST00000505676 ESRGQ1W209 222 aa11.67□□□□□ -0.54
TRAPPC11-204ENST00000505676 LINC00337Q8N6G1 96 aa11.67□□□□□ -0.54
TRAPPC11-204ENST00000505676 H0YGX0 51 aa11.67□□□□□ -0.54
TRAPPC11-204ENST00000505676 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
TRAPPC11-204ENST00000505676 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
TRAPPC11-204ENST00000505676 FBN1P35555 2871 aaKnown RBP11.64□□□□□ -0.55
TRAPPC11-204ENST00000505676 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC11-204ENST00000505676 DEFB121Q5J5C9 76 aa11.62□□□□□ -0.55
TRAPPC11-204ENST00000505676 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
TRAPPC11-204ENST00000505676 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
TRAPPC11-204ENST00000505676 KRTAP26-1Q6PEX3 210 aa11.61□□□□□ -0.55
TRAPPC11-204ENST00000505676 SMIM11BQ8TCY0 68 aa11.61□□□□□ -0.55
TRAPPC11-204ENST00000505676 C2orf48Q96LS8 159 aa11.61□□□□□ -0.55
TRAPPC11-204ENST00000505676 DNAH3Q8TD57 4116 aa11.6□□□□□ -0.55
TRAPPC11-204ENST00000505676 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
TRAPPC11-204ENST00000505676 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
TRAPPC11-204ENST00000505676 STAB1Q9NY15 2570 aa11.59□□□□□ -0.55
TRAPPC11-204ENST00000505676 OR13C6PQ8NH95 151 aa11.59□□□□□ -0.55
TRAPPC11-204ENST00000505676 UNQ6190/PRO20217Q6UXQ8 127 aa11.59□□□□□ -0.55
TRAPPC11-204ENST00000505676 A0A1B0GX51 115 aa11.58□□□□□ -0.56
TRAPPC11-204ENST00000505676 CMYA5Q8N3K9 4069 aa11.57□□□□□ -0.56
TRAPPC11-204ENST00000505676 MAST4O15021 2626 aa11.56□□□□□ -0.56
TRAPPC11-204ENST00000505676 C6orf223Q8N319 242 aa11.56□□□□□ -0.56
TRAPPC11-204ENST00000505676 UPK3BQ9BT76 320 aa11.56□□□□□ -0.56
TRAPPC11-204ENST00000505676 DNAL4O96015 105 aa11.55□□□□□ -0.56
TRAPPC11-204ENST00000505676 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC11-204ENST00000505676 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
TRAPPC11-204ENST00000505676 MRAPQ8TCY5 172 aa11.55□□□□□ -0.56
TRAPPC11-204ENST00000505676 RMI2Q96E14 147 aa11.55□□□□□ -0.56
TRAPPC11-204ENST00000505676 CAMK2N2Q96S95 79 aa11.55□□□□□ -0.56
TRAPPC11-204ENST00000505676 C9orf116Q5BN46 136 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC11-204ENST00000505676 SIGMAR1Q99720 223 aa11.54□□□□□ -0.56
TRAPPC11-204ENST00000505676 C6orf48Q9UBA6 75 aa11.54□□□□□ -0.56
TRAPPC11-204ENST00000505676 SNCGO76070 127 aa11.53□□□□□ -0.56
TRAPPC11-204ENST00000505676 IGKV2D-24A0A075B6R9 120 aa11.52□□□□□ -0.57
TRAPPC11-204ENST00000505676 C15orf56Q8N910 161 aa11.52□□□□□ -0.57
TRAPPC11-204ENST00000505676 FAM218AQ96MZ4 157 aa11.52□□□□□ -0.57
TRAPPC11-204ENST00000505676 LINC00588Q9Y4M8 146 aa11.52□□□□□ -0.57
TRAPPC11-204ENST00000505676 BAALC-AS2P0C853 105 aa11.51□□□□□ -0.57
TRAPPC11-204ENST00000505676 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
TRAPPC11-204ENST00000505676 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
TRAPPC11-204ENST00000505676 TEX49A0A1B0GTD5 131 aa11.5□□□□□ -0.57
TRAPPC11-204ENST00000505676 SCGB1A1P11684 91 aa11.5□□□□□ -0.57
TRAPPC11-204ENST00000505676 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms