RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LINC00526Q96FQ7 95 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 TMEM101Q96IK0 257 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 TNXBP22105 4242 aa8.81□□□□□ -1
PDLIM7-211ENST00000504318 HMCN2Q8NDA2 5059 aa8.8□□□□□ -1
PDLIM7-211ENST00000504318 A0A096LNI7 61 aa8.8□□□□□ -1
PDLIM7-211ENST00000504318 IGIPA6NJ69 53 aa8.8□□□□□ -1
PDLIM7-211ENST00000504318 DPM2O94777 84 aa8.8□□□□□ -1
PDLIM7-211ENST00000504318 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
PDLIM7-211ENST00000504318 PRO1933Q9H354 126 aa8.8□□□□□ -1
PDLIM7-211ENST00000504318 IGHV1-58A0A0C4DH39 117 aa8.79□□□□□ -1
PDLIM7-211ENST00000504318 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
PDLIM7-211ENST00000504318 Q6ZUT4 128 aa8.79□□□□□ -1
PDLIM7-211ENST00000504318 SPANXA1Q9NS26 97 aa8.79□□□□□ -1
PDLIM7-211ENST00000504318 PYGO1Q9Y3Y4 419 aa8.79□□□□□ -1
PDLIM7-211ENST00000504318 F8VRH5 84 aa8.78□□□□□ -1
PDLIM7-211ENST00000504318 IGKCP01834 107 aa8.78□□□□□ -1
PDLIM7-211ENST00000504318 DDTP30046 118 aa8.78□□□□□ -1
PDLIM7-211ENST00000504318 PMVKQ15126 192 aa8.78□□□□□ -1
PDLIM7-211ENST00000504318 CHTOPQ9Y3Y2 248 aaKnown RBP8.78□□□□□ -1
PDLIM7-211ENST00000504318 RPL39P62891 51 aaKnown RBP8.77□□□□□ -1.01
PDLIM7-211ENST00000504318 SS18Q15532 418 aa8.77□□□□□ -1.01
PDLIM7-211ENST00000504318 PMCHL2Q9BQD1 86 aa8.77□□□□□ -1.01
PDLIM7-211ENST00000504318 MIEN1Q9BRT3 115 aa8.77□□□□□ -1.01
PDLIM7-211ENST00000504318 UQCR10Q9UDW1 63 aa8.77□□□□□ -1.01
PDLIM7-211ENST00000504318 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 IGLC3P0DOY3 106 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 Q6ZRU5 148 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 VCX2Q9H322 139 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 CST9LQ9H4G1 147 aa8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 MRPL35Q9NZE8 188 aaKnown RBP8.75□□□□□ -1.01
PDLIM7-211ENST00000504318 IGLV4-69A0A075B6H9 119 aa8.74□□□□□ -1.01
PDLIM7-211ENST00000504318 STPG4Q8N801 248 aa8.74□□□□□ -1.01
PDLIM7-211ENST00000504318 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
PDLIM7-211ENST00000504318 IGLV4-3A0A075B6K6 122 aa8.73□□□□□ -1.01
PDLIM7-211ENST00000504318 TRAV13-1A0A0B4J241 112 aa8.73□□□□□ -1.01
PDLIM7-211ENST00000504318 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
PDLIM7-211ENST00000504318 SYCNQ0VAF6 134 aa8.73□□□□□ -1.01
PDLIM7-211ENST00000504318 C2orf88Q9BSF0 95 aa8.73□□□□□ -1.01
PDLIM7-211ENST00000504318 IGHV3OR16-9A0A0B4J2B5 98 aa8.72□□□□□ -1.01
PDLIM7-211ENST00000504318 COX7A2LO14548 114 aa8.72□□□□□ -1.01
PDLIM7-211ENST00000504318 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
PDLIM7-211ENST00000504318 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 COX8AP10176 69 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 PTTG1IPP53801 180 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 HERVK_113P61574 105 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 C5orf38Q86SI9 138 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 AMELXQ99217 191 aa8.71□□□□□ -1.02
PDLIM7-211ENST00000504318 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
PDLIM7-211ENST00000504318 ZC2HC1BQ5TFG8 222 aa8.7□□□□□ -1.02
PDLIM7-211ENST00000504318 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
PDLIM7-211ENST00000504318 DPH3Q96FX2 82 aa8.7□□□□□ -1.02
PDLIM7-211ENST00000504318 C14orf144Q96I85 54 aa8.7□□□□□ -1.02
PDLIM7-211ENST00000504318 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
PDLIM7-211ENST00000504318 DLEU1O43261 78 aa8.69□□□□□ -1.02
PDLIM7-211ENST00000504318 ANKRD39Q53RE8 183 aa8.69□□□□□ -1.02
PDLIM7-211ENST00000504318 LINC00474Q9P2X8 69 aa8.69□□□□□ -1.02
PDLIM7-211ENST00000504318 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
PDLIM7-211ENST00000504318 C7orf33Q8WU49 177 aa8.68□□□□□ -1.02
PDLIM7-211ENST00000504318 LOC107984640A0A0U1RRK4 108 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 APOMO95445 188 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 MALP21145 153 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 NMUP48645 174 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 SEC11AP67812 179 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
PDLIM7-211ENST00000504318 E9PLD3 99 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 KIAA0087Q14695 138 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 LINC00242Q5T6M2 205 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 C10orf25Q5T742 122 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 CAMK2N2Q96S95 79 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 PKIGQ9Y2B9 76 aa8.66□□□□□ -1.02
PDLIM7-211ENST00000504318 A0A0J9YXV3 536 aa8.65□□□□□ -1.02
PDLIM7-211ENST00000504318 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
PDLIM7-211ENST00000504318 TMEM170BQ5T4T1 132 aa8.65□□□□□ -1.02
PDLIM7-211ENST00000504318 UBE2D1P51668 147 aa8.64□□□□□ -1.03
PDLIM7-211ENST00000504318 GAGE2BQ13066 116 aa8.64□□□□□ -1.03
PDLIM7-211ENST00000504318 LBHQ53QV2 105 aaPredicted RBP8.64□□□□□ -1.03
PDLIM7-211ENST00000504318 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
PDLIM7-211ENST00000504318 GEMIN7Q9H840 131 aaKnown RBP8.64□□□□□ -1.03
PDLIM7-211ENST00000504318 A0A087WZ39 114 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 H3BRM9 83 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 M0R143 59 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 TLX1NBP0CAT3 122 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 HERVK_113P63121 156 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 ORAOV1Q8WV07 137 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 UBR4Q5T4S7 5183 aa8.63□□□□□ -1.03
PDLIM7-211ENST00000504318 IGKV2D-26A0A0A0MRZ7 120 aa8.62□□□□□ -1.03
PDLIM7-211ENST00000504318 F8WDY8 70 aa8.62□□□□□ -1.03
PDLIM7-211ENST00000504318 ZNF22P17026 224 aaPredicted RBP8.62□□□□□ -1.03
PDLIM7-211ENST00000504318 CTAG1AP78358 180 aa8.62□□□□□ -1.03
PDLIM7-211ENST00000504318 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
PDLIM7-211ENST00000504318 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms