RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 MUC7Q8TAX7 377 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 IBA57-AS1B1ANH7 110 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 HIST2H2BDQ6DRA6 164 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 SFTA2Q6UW10 78 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 WFDC9Q8NEX5 89 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 C11orf44Q8N8P7 122 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 FBN1P35555 2871 aaKnown RBP4.35□□□□□ -1.71
COPB2-204ENST00000504295 DNAH5Q8TE73 4624 aa4.35□□□□□ -1.71
COPB2-204ENST00000504295 Q5XG85 94 aa4.34□□□□□ -1.71
COPB2-204ENST00000504295 A0A087WYN8 130 aa4.34□□□□□ -1.71
COPB2-204ENST00000504295 IGHV3-11P01762 117 aa4.34□□□□□ -1.71
COPB2-204ENST00000504295 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
COPB2-204ENST00000504295 GAGE12JA6NER3 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 GAGE7O76087 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 IGKV3-20P01619 116 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 IGLV6-57P01721 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 PRM2P04554 102 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 GAGE12FP0CL80 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 GAGE12GP0CL81 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 GAGE12IP0CL82 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 GAGE4Q13068 117 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 PRR34Q9NV39 138 aa4.34□□□□□ -1.72
COPB2-204ENST00000504295 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.33□□□□□ -1.72
COPB2-204ENST00000504295 SLURP1P55000 103 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 SCGB1D4Q6XE38 83 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 Q8IZM0 81 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 LINC00482Q8N8I6 264 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
COPB2-204ENST00000504295 COX17Q14061 63 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 X6R8D5 127 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 ATRQ13535 2644 aa4.33□□□□□ -1.72
COPB2-204ENST00000504295 A0A0J9YWU9 116 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 KNCNA6PVL3 124 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 CCL18P55774 89 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 ZNF56Q15929 161 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 INSP01308 110 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 COX7CP15954 63 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 S100A4P26447 101 aaKnown RBP4.32□□□□□ -1.72
COPB2-204ENST00000504295 SYNJ2BPP57105 145 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 SMIM11BQ8TCY0 68 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 UQCRQO14949 82 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 MALP21145 153 aa4.32□□□□□ -1.72
COPB2-204ENST00000504295 CMC4P56277 68 aaPredicted RBP4.32□□□□□ -1.72
COPB2-204ENST00000504295 SORL1Q92673 2214 aa4.31□□□□□ -1.72
COPB2-204ENST00000504295 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
COPB2-204ENST00000504295 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
COPB2-204ENST00000504295 IGLV4-60A0A075B6I1 120 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 CCKP06307 115 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 C16orf74Q96GX8 76 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 Q9H8V8 135 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 VWFP04275 2813 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 NDUFC2-KCTD14E9PQ53 114 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 KPRPQ5T749 579 aaPredicted RBP4.3□□□□□ -1.72
COPB2-204ENST00000504295 DYNLRB2Q8TF09 96 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
COPB2-204ENST00000504295 GAGE2BQ13066 116 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 DUX3Q96PT4 197 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 COL6A5A8TX70 2615 aa4.3□□□□□ -1.72
COPB2-204ENST00000504295 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 ATP5EP2Q5VTU8 51 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 Q6ZQT0 140 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 COX7B2Q8TF08 81 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 PAX4O43316 350 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 LINC00846Q9NV44 126 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 WNK1Q9H4A3 2382 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 TNP2Q05952 138 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 Q6ZTI0 123 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 SS18L2Q9UHA2 77 aa4.29□□□□□ -1.72
COPB2-204ENST00000504295 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
COPB2-204ENST00000504295 DEFB131AP59861 70 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 EGFEM1PQ0D2K5 195 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 DEFB136Q30KP8 78 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 CHCHD5Q9BSY4 110 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 H0YGX0 51 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
COPB2-204ENST00000504295 RPL18AQ02543 176 aaKnown RBP4.28□□□□□ -1.73
COPB2-204ENST00000504295 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
COPB2-204ENST00000504295 RNASE13Q5GAN3 156 aaKnown RBP4.27□□□□□ -1.73
COPB2-204ENST00000504295 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
COPB2-204ENST00000504295 IGHV3-64A0A075B6Q5 118 aa4.27□□□□□ -1.73
COPB2-204ENST00000504295 Q8N814 137 aa4.27□□□□□ -1.73
COPB2-204ENST00000504295 SNCGO76070 127 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 VPS13BQ7Z7G8 4022 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 B5MCH6 92 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 HSPG2P98160 4391 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 INAFM2P0DMQ5 153 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 FAM74A4Q5TZK3 123 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 DEFB104AQ8WTQ1 72 aa4.26□□□□□ -1.73
COPB2-204ENST00000504295 ERC2-IT1O76042 136 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms