RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 F8VRH5 84 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 C2orf82Q6UX34 121 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 Q8N1X5 172 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
CPNE1-228ENST00000498814 A0A096LNI7 61 aa9.91□□□□□ -0.82
CPNE1-228ENST00000498814 TRBV30A0A0K0K1B3 111 aa9.91□□□□□ -0.82
CPNE1-228ENST00000498814 CKS1BP61024 79 aa9.91□□□□□ -0.82
CPNE1-228ENST00000498814 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
CPNE1-228ENST00000498814 LINC00474Q9P2X8 69 aa9.91□□□□□ -0.82
CPNE1-228ENST00000498814 IGLV5-39A0A0G2JS06 123 aa9.9□□□□□ -0.82
CPNE1-228ENST00000498814 CXCL5P42830 114 aa9.9□□□□□ -0.82
CPNE1-228ENST00000498814 ODF1Q14990 250 aa9.9□□□□□ -0.82
CPNE1-228ENST00000498814 TMEM170BQ5T4T1 132 aa9.9□□□□□ -0.82
CPNE1-228ENST00000498814 IGKV2-24A0A0C4DH68 120 aa9.89□□□□□ -0.83
CPNE1-228ENST00000498814 H0Y8G0 127 aa9.89□□□□□ -0.83
CPNE1-228ENST00000498814 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
CPNE1-228ENST00000498814 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
CPNE1-228ENST00000498814 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
CPNE1-228ENST00000498814 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
CPNE1-228ENST00000498814 A0A087WYN8 130 aa9.88□□□□□ -0.83
CPNE1-228ENST00000498814 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
CPNE1-228ENST00000498814 MAP1LC3CQ9BXW4 147 aa9.88□□□□□ -0.83
CPNE1-228ENST00000498814 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
CPNE1-228ENST00000498814 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
CPNE1-228ENST00000498814 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
CPNE1-228ENST00000498814 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
CPNE1-228ENST00000498814 PLNP26678 52 aa9.85□□□□□ -0.83
CPNE1-228ENST00000498814 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
CPNE1-228ENST00000498814 Q6ZRP5 223 aa9.85□□□□□ -0.83
CPNE1-228ENST00000498814 STPG4Q8N801 248 aa9.85□□□□□ -0.83
CPNE1-228ENST00000498814 EPM2AB3EWF7 344 aa9.84□□□□□ -0.83
CPNE1-228ENST00000498814 NDUFC2-KCTD14E9PQ53 114 aa9.84□□□□□ -0.83
CPNE1-228ENST00000498814 FAM229AH3BQW9 127 aa9.84□□□□□ -0.83
CPNE1-228ENST00000498814 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
CPNE1-228ENST00000498814 FAT1Q14517 4588 aa9.84□□□□□ -0.83
CPNE1-228ENST00000498814 DPM2O94777 84 aa9.83□□□□□ -0.84
CPNE1-228ENST00000498814 Q5VSD8 79 aa9.83□□□□□ -0.84
CPNE1-228ENST00000498814 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
CPNE1-228ENST00000498814 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
CPNE1-228ENST00000498814 PMCHL2Q9BQD1 86 aa9.82□□□□□ -0.84
CPNE1-228ENST00000498814 IGKCP01834 107 aa9.81□□□□□ -0.84
CPNE1-228ENST00000498814 GAGE2EQ4V326 116 aa9.81□□□□□ -0.84
CPNE1-228ENST00000498814 SFTA2Q6UW10 78 aa9.81□□□□□ -0.84
CPNE1-228ENST00000498814 PET117Q6UWS5 81 aa9.81□□□□□ -0.84
CPNE1-228ENST00000498814 GAGE2DQ9UEU5 116 aa9.81□□□□□ -0.84
CPNE1-228ENST00000498814 A0A1W2PNN7 141 aa9.79□□□□□ -0.84
CPNE1-228ENST00000498814 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
CPNE1-228ENST00000498814 C3orf79P0CE67 100 aa9.79□□□□□ -0.84
CPNE1-228ENST00000498814 LINC01545Q5VT33 79 aa9.79□□□□□ -0.84
CPNE1-228ENST00000498814 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-228ENST00000498814 SRRM2Q9UQ35 2752 aaKnown RBP9.79□□□□□ -0.84
CPNE1-228ENST00000498814 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
CPNE1-228ENST00000498814 ABCA13Q86UQ4 5058 aa9.77□□□□□ -0.85
CPNE1-228ENST00000498814 S100A6P06703 90 aa9.77□□□□□ -0.85
CPNE1-228ENST00000498814 KRTDAPP60985 99 aa9.77□□□□□ -0.85
CPNE1-228ENST00000498814 C9orf129Q5T035 196 aaKnown RBP9.77□□□□□ -0.85
CPNE1-228ENST00000498814 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.85
CPNE1-228ENST00000498814 LEPROTO15243 131 aa9.76□□□□□ -0.85
CPNE1-228ENST00000498814 HERVK_113P61574 105 aa9.76□□□□□ -0.85
CPNE1-228ENST00000498814 COX17Q14061 63 aa9.75□□□□□ -0.85
CPNE1-228ENST00000498814 C7orf33Q8WU49 177 aa9.75□□□□□ -0.85
CPNE1-228ENST00000498814 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
CPNE1-228ENST00000498814 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
CPNE1-228ENST00000498814 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
CPNE1-228ENST00000498814 S100A2P29034 98 aa9.74□□□□□ -0.85
CPNE1-228ENST00000498814 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
CPNE1-228ENST00000498814 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
CPNE1-228ENST00000498814 HIST1H2BLQ99880 126 aa9.74□□□□□ -0.85
CPNE1-228ENST00000498814 XAGE1AQ9HD64 81 aa9.74□□□□□ -0.85
CPNE1-228ENST00000498814 PFN2P35080 140 aa9.73□□□□□ -0.85
CPNE1-228ENST00000498814 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
CPNE1-228ENST00000498814 C20orf202A1L168 122 aa9.72□□□□□ -0.85
CPNE1-228ENST00000498814 J3QQQ9 107 aa9.72□□□□□ -0.85
CPNE1-228ENST00000498814 TSPEAR-AS2P59090 65 aa9.72□□□□□ -0.85
CPNE1-228ENST00000498814 SNRPEP62304 92 aaKnown RBP9.72□□□□□ -0.85
CPNE1-228ENST00000498814 HERV-K104P63124 156 aa9.72□□□□□ -0.85
CPNE1-228ENST00000498814 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
CPNE1-228ENST00000498814 KRTAP7-1Q8IUC3 87 aa9.72□□□□□ -0.85
CPNE1-228ENST00000498814 PCLOQ9Y6V0 5065 aa9.72□□□□□ -0.85
CPNE1-228ENST00000498814 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
CPNE1-228ENST00000498814 E9PLD3 99 aa9.71□□□□□ -0.86
CPNE1-228ENST00000498814 C5orf52A6NGY3 159 aa9.7□□□□□ -0.86
CPNE1-228ENST00000498814 NMUP48645 174 aa9.7□□□□□ -0.86
CPNE1-228ENST00000498814 AKR1D1P51857 326 aa9.7□□□□□ -0.86
CPNE1-228ENST00000498814 PHF5AQ7RTV0 110 aaKnown RBP9.7□□□□□ -0.86
CPNE1-228ENST00000498814 INAFM2P0DMQ5 153 aa9.69□□□□□ -0.86
CPNE1-228ENST00000498814 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
CPNE1-228ENST00000498814 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
CPNE1-228ENST00000498814 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
CPNE1-228ENST00000498814 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
CPNE1-228ENST00000498814 M0QXV9 152 aa9.68□□□□□ -0.86
CPNE1-228ENST00000498814 LINC00158P58513 81 aa9.68□□□□□ -0.86
CPNE1-228ENST00000498814 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
CPNE1-228ENST00000498814 MEIG1Q5JSS6 88 aa9.67□□□□□ -0.86
CPNE1-228ENST00000498814 SMIM13P0DJ93 91 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms