RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 COX11Q9Y6N1 276 aa13.36□□□□□ -0.27
ACTN4-208ENST00000497637 IGHV3-30P01768 117 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 SMIM13P0DJ93 91 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 IGHV3-30-5P0DP03 117 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 CLPSL2Q6UWE3 100 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 CD164L2Q6UWJ8 174 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 C5orf38Q86SI9 138 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 LITAFQ99732 161 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 PRR34Q9NV39 138 aa13.35□□□□□ -0.27
ACTN4-208ENST00000497637 XCL1P47992 114 aa13.34□□□□□ -0.27
ACTN4-208ENST00000497637 COX7B2Q8TF08 81 aa13.34□□□□□ -0.27
ACTN4-208ENST00000497637 CHCHD10Q8WYQ3 142 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-208ENST00000497637 ZNF625Q96I27 306 aaPredicted RBP13.34□□□□□ -0.27
ACTN4-208ENST00000497637 A0A1B0GWB2 263 aa13.33□□□□□ -0.28
ACTN4-208ENST00000497637 C16orf90A8MZG2 172 aa13.33□□□□□ -0.28
ACTN4-208ENST00000497637 M0R2N4 97 aa13.33□□□□□ -0.28
ACTN4-208ENST00000497637 HERV-K104P63124 156 aa13.33□□□□□ -0.28
ACTN4-208ENST00000497637 Q9H8V8 135 aa13.33□□□□□ -0.28
ACTN4-208ENST00000497637 KLK12Q9UKR0 248 aa13.33□□□□□ -0.28
ACTN4-208ENST00000497637 TMEM238LA0A1B0GVL6 79 aa13.32□□□□□ -0.28
ACTN4-208ENST00000497637 A6NJY4 79 aa13.32□□□□□ -0.28
ACTN4-208ENST00000497637 Q6ZVH6 145 aa13.32□□□□□ -0.28
ACTN4-208ENST00000497637 WFDC10BQ8IUB3 73 aa13.32□□□□□ -0.28
ACTN4-208ENST00000497637 SPANXDQ9BXN6 97 aa13.32□□□□□ -0.28
ACTN4-208ENST00000497637 SPANXCQ9NY87 97 aa13.32□□□□□ -0.28
ACTN4-208ENST00000497637 IGHV3-33P01772 117 aa13.31□□□□□ -0.28
ACTN4-208ENST00000497637 NHP2Q9NX24 153 aaKnown RBP13.31□□□□□ -0.28
ACTN4-208ENST00000497637 C9orf118A6NHY6 69 aa13.3□□□□□ -0.28
ACTN4-208ENST00000497637 ENHOQ6UWT2 76 aa13.3□□□□□ -0.28
ACTN4-208ENST00000497637 COX7A2LO14548 114 aa13.29□□□□□ -0.28
ACTN4-208ENST00000497637 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
ACTN4-208ENST00000497637 TRAV8-4A0A0B4J246 113 aa13.28□□□□□ -0.28
ACTN4-208ENST00000497637 FOXI1Q12951 378 aa13.28□□□□□ -0.28
ACTN4-208ENST00000497637 LINC01556Q5JQF7 62 aa13.28□□□□□ -0.28
ACTN4-208ENST00000497637 ADAMTSL4-AS1Q5T5F5 129 aa13.28□□□□□ -0.28
ACTN4-208ENST00000497637 MUSTN1Q8IVN3 82 aa13.28□□□□□ -0.28
ACTN4-208ENST00000497637 IFITM1P13164 125 aa13.27□□□□□ -0.29
ACTN4-208ENST00000497637 MIAQ16674 131 aa13.27□□□□□ -0.29
ACTN4-208ENST00000497637 SFTA2Q6UW10 78 aa13.27□□□□□ -0.29
ACTN4-208ENST00000497637 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.29
ACTN4-208ENST00000497637 IGLV10-54A0A075B6I4 117 aa13.26□□□□□ -0.29
ACTN4-208ENST00000497637 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
ACTN4-208ENST00000497637 K7ERJ3 54 aa13.26□□□□□ -0.29
ACTN4-208ENST00000497637 RPL24P83731 157 aaKnown RBP13.26□□□□□ -0.29
ACTN4-208ENST00000497637 Q8IZM0 81 aa13.26□□□□□ -0.29
ACTN4-208ENST00000497637 CRPP02741 224 aa13.25□□□□□ -0.29
ACTN4-208ENST00000497637 Q6ZR54 194 aa13.25□□□□□ -0.29
ACTN4-208ENST00000497637 RAB37Q96AX2 223 aa13.25□□□□□ -0.29
ACTN4-208ENST00000497637 UBE2WQ96B02 151 aa13.25□□□□□ -0.29
ACTN4-208ENST00000497637 DNAH10OSP0CZ25 163 aa13.24□□□□□ -0.29
ACTN4-208ENST00000497637 C1orf134Q5TEV5 83 aa13.24□□□□□ -0.29
ACTN4-208ENST00000497637 LRP1BQ9NZR2 4599 aa13.23□□□□□ -0.29
ACTN4-208ENST00000497637 A4D1N5 150 aa13.23□□□□□ -0.29
ACTN4-208ENST00000497637 PRSS2P07478 247 aa13.23□□□□□ -0.29
ACTN4-208ENST00000497637 C6orf226Q5I0X4 101 aa13.23□□□□□ -0.29
ACTN4-208ENST00000497637 MEIG1Q5JSS6 88 aa13.23□□□□□ -0.29
ACTN4-208ENST00000497637 LINC00588Q9Y4M8 146 aa13.23□□□□□ -0.29
ACTN4-208ENST00000497637 SRRM2Q9UQ35 2752 aaKnown RBP13.23□□□□□ -0.29
ACTN4-208ENST00000497637 UBR4Q5T4S7 5183 aa13.22□□□□□ -0.29
ACTN4-208ENST00000497637 MALP21145 153 aa13.22□□□□□ -0.29
ACTN4-208ENST00000497637 CCL18P55774 89 aa13.22□□□□□ -0.29
ACTN4-208ENST00000497637 KIAA0087Q14695 138 aa13.22□□□□□ -0.29
ACTN4-208ENST00000497637 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.21□□□□□ -0.29
ACTN4-208ENST00000497637 H3BUT2 72 aa13.21□□□□□ -0.29
ACTN4-208ENST00000497637 APOMO95445 188 aa13.21□□□□□ -0.29
ACTN4-208ENST00000497637 CFC1BP0CG36 223 aa13.21□□□□□ -0.29
ACTN4-208ENST00000497637 CFC1P0CG37 223 aa13.21□□□□□ -0.29
ACTN4-208ENST00000497637 PPDPFQ9H3Y8 114 aa13.21□□□□□ -0.29
ACTN4-208ENST00000497637 APOBP04114 4563 aaKnown RBP13.21□□□□□ -0.29
ACTN4-208ENST00000497637 VAMP3Q15836 100 aa13.2□□□□□ -0.3
ACTN4-208ENST00000497637 COPS9Q8WXC6 57 aa13.2□□□□□ -0.3
ACTN4-208ENST00000497637 A0A0B4J2C4 111 aa13.19□□□□□ -0.3
ACTN4-208ENST00000497637 IBA57-AS1B1ANH7 110 aa13.19□□□□□ -0.3
ACTN4-208ENST00000497637 CXCL5P42830 114 aa13.19□□□□□ -0.3
ACTN4-208ENST00000497637 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
ACTN4-208ENST00000497637 UPK3BQ9BT76 320 aa13.19□□□□□ -0.3
ACTN4-208ENST00000497637 CFAP161Q6P656 301 aa13.18□□□□□ -0.3
ACTN4-208ENST00000497637 LINC00308Q8TCZ7 52 aa13.18□□□□□ -0.3
ACTN4-208ENST00000497637 A0A1W2PPM0 123 aa13.17□□□□□ -0.3
ACTN4-208ENST00000497637 EPM2AB3EWF7 344 aa13.16□□□□□ -0.3
ACTN4-208ENST00000497637 EIF4EBP3O60516 100 aaPredicted RBP13.16□□□□□ -0.3
ACTN4-208ENST00000497637 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
ACTN4-208ENST00000497637 DAND5Q8N907 189 aa13.16□□□□□ -0.3
ACTN4-208ENST00000497637 NAA38Q9BRA0 125 aaKnown RBP13.16□□□□□ -0.3
ACTN4-208ENST00000497637 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
ACTN4-208ENST00000497637 CKS1BP61024 79 aa13.15□□□□□ -0.3
ACTN4-208ENST00000497637 UBE2V1Q13404 147 aa13.15□□□□□ -0.3
ACTN4-208ENST00000497637 PRO1854Q9UHT4 67 aa13.15□□□□□ -0.3
ACTN4-208ENST00000497637 INAFM2P0DMQ5 153 aa13.14□□□□□ -0.31
ACTN4-208ENST00000497637 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
ACTN4-208ENST00000497637 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
ACTN4-208ENST00000497637 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
ACTN4-208ENST00000497637 FABP2P12104 132 aa13.13□□□□□ -0.31
ACTN4-208ENST00000497637 LINC00158P58513 81 aa13.13□□□□□ -0.31
ACTN4-208ENST00000497637 NPC2P61916 151 aa13.13□□□□□ -0.31
ACTN4-208ENST00000497637 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
ACTN4-208ENST00000497637 TNP2Q05952 138 aa13.12□□□□□ -0.31
ACTN4-208ENST00000497637 C2orf82Q6UX34 121 aa13.12□□□□□ -0.31
ACTN4-208ENST00000497637 MIR7-3HGQ8N6C7 128 aa13.12□□□□□ -0.31
ACTN4-208ENST00000497637 C1orf43Q9BWL3 253 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms