RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CARD19Q96LW7 228 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
PTPN7-218ENST00000496197 PRSS2P07478 247 aa8.69□□□□□ -1.02
PTPN7-218ENST00000496197 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
PTPN7-218ENST00000496197 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
PTPN7-218ENST00000496197 C20orf202A1L168 122 aa8.68□□□□□ -1.02
PTPN7-218ENST00000496197 C16orf90A8MZG2 172 aa8.68□□□□□ -1.02
PTPN7-218ENST00000496197 NDUFA1O15239 70 aa8.68□□□□□ -1.02
PTPN7-218ENST00000496197 C9orf116Q5BN46 136 aaPredicted RBP8.68□□□□□ -1.02
PTPN7-218ENST00000496197 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
PTPN7-218ENST00000496197 GCSHP23434 173 aa8.67□□□□□ -1.02
PTPN7-218ENST00000496197 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-218ENST00000496197 PANO1I0J062 215 aa8.66□□□□□ -1.02
PTPN7-218ENST00000496197 CKS1BP61024 79 aa8.66□□□□□ -1.02
PTPN7-218ENST00000496197 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
PTPN7-218ENST00000496197 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
PTPN7-218ENST00000496197 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-218ENST00000496197 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
PTPN7-218ENST00000496197 E9PLD3 99 aa8.65□□□□□ -1.02
PTPN7-218ENST00000496197 LEPROTO15243 131 aa8.65□□□□□ -1.02
PTPN7-218ENST00000496197 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
PTPN7-218ENST00000496197 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
PTPN7-218ENST00000496197 F8WDY8 70 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 CXCL5P42830 114 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 HERVK_113P61574 105 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 TTTY13Q9BZ97 58 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 J3QQQ9 107 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 JOSD1Q15040 202 aaPredicted RBP8.64□□□□□ -1.03
PTPN7-218ENST00000496197 PYY3Q5JQD4 70 aa8.64□□□□□ -1.03
PTPN7-218ENST00000496197 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
PTPN7-218ENST00000496197 A0A096LNI7 61 aa8.63□□□□□ -1.03
PTPN7-218ENST00000496197 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
PTPN7-218ENST00000496197 RNF151Q2KHN1 245 aa8.63□□□□□ -1.03
PTPN7-218ENST00000496197 HAMPP81172 84 aa8.62□□□□□ -1.03
PTPN7-218ENST00000496197 Q6ZRP5 223 aa8.62□□□□□ -1.03
PTPN7-218ENST00000496197 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
PTPN7-218ENST00000496197 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
PTPN7-218ENST00000496197 Q6ZSA8 131 aa8.61□□□□□ -1.03
PTPN7-218ENST00000496197 IGKV2-24A0A0C4DH68 120 aa8.6□□□□□ -1.03
PTPN7-218ENST00000496197 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
PTPN7-218ENST00000496197 RPL18AQ02543 176 aaKnown RBP8.6□□□□□ -1.03
PTPN7-218ENST00000496197 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
PTPN7-218ENST00000496197 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
PTPN7-218ENST00000496197 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
PTPN7-218ENST00000496197 AKR1D1P51857 326 aa8.59□□□□□ -1.03
PTPN7-218ENST00000496197 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
PTPN7-218ENST00000496197 LOC105371267A0A1B0GV96 52 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 PFN2P35080 140 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 NMUP48645 174 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 PTTG1IPP53801 180 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 GAGE2BQ13066 116 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 CIRBPQ14011 172 aaKnown RBP8.58□□□□□ -1.04
PTPN7-218ENST00000496197 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 ERG28Q9UKR5 140 aa8.58□□□□□ -1.04
PTPN7-218ENST00000496197 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
PTPN7-218ENST00000496197 GAGE2EQ4V326 116 aa8.57□□□□□ -1.04
PTPN7-218ENST00000496197 GAGE2DQ9UEU5 116 aa8.57□□□□□ -1.04
PTPN7-218ENST00000496197 MYMXA0A1B0GTQ4 84 aa8.57□□□□□ -1.04
PTPN7-218ENST00000496197 XGP55808 180 aa8.57□□□□□ -1.04
PTPN7-218ENST00000496197 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
PTPN7-218ENST00000496197 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
PTPN7-218ENST00000496197 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
PTPN7-218ENST00000496197 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 ZNF815PA8K554 130 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 HERV-K104P63124 156 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
PTPN7-218ENST00000496197 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
PTPN7-218ENST00000496197 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
PTPN7-218ENST00000496197 A0A087WYN8 130 aa8.53□□□□□ -1.04
PTPN7-218ENST00000496197 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
PTPN7-218ENST00000496197 HSBP1L1C9JCN9 74 aa8.53□□□□□ -1.04
PTPN7-218ENST00000496197 DAND5Q8N907 189 aa8.53□□□□□ -1.04
PTPN7-218ENST00000496197 LITAFQ99732 161 aa8.53□□□□□ -1.04
PTPN7-218ENST00000496197 LINC00158P58513 81 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 COX17Q14061 63 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 ADAMTSL4-AS1Q5T5F5 129 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 Q8NDZ9 215 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
PTPN7-218ENST00000496197 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
PTPN7-218ENST00000496197 SND1-IT1Q9HBX3 110 aa8.51□□□□□ -1.05
PTPN7-218ENST00000496197 KIAA1109Q2LD37 5005 aa8.51□□□□□ -1.05
PTPN7-218ENST00000496197 EIF4EBP3O60516 100 aaPredicted RBP8.51□□□□□ -1.05
PTPN7-218ENST00000496197 SERTAD4-AS1Q5TG53 156 aa8.51□□□□□ -1.05
PTPN7-218ENST00000496197 PKIGQ9Y2B9 76 aa8.51□□□□□ -1.05
PTPN7-218ENST00000496197 CDK2AP2O75956 126 aa8.5□□□□□ -1.05
PTPN7-218ENST00000496197 C14orf144Q96I85 54 aa8.5□□□□□ -1.05
PTPN7-218ENST00000496197 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
PTPN7-218ENST00000496197 EPM2AB3EWF7 344 aa8.49□□□□□ -1.05
PTPN7-218ENST00000496197 COX8AP10176 69 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms