RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 FAT1Q14517 4588 aa7.11□□□□□ -1.27
APTX-230ENST00000494649 NDUFA1O15239 70 aa7.1□□□□□ -1.27
APTX-230ENST00000494649 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
APTX-230ENST00000494649 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
APTX-230ENST00000494649 C6orf226Q5I0X4 101 aa7.1□□□□□ -1.27
APTX-230ENST00000494649 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
APTX-230ENST00000494649 MAJINQ3KP22 176 aa7.1□□□□□ -1.27
APTX-230ENST00000494649 C2orf48Q96LS8 159 aa7.1□□□□□ -1.27
APTX-230ENST00000494649 IGLV5-45A0A087WSX0 123 aa7.09□□□□□ -1.27
APTX-230ENST00000494649 CKS1BP61024 79 aa7.09□□□□□ -1.27
APTX-230ENST00000494649 H3BRM9 83 aa7.08□□□□□ -1.28
APTX-230ENST00000494649 HSPB8Q9UJY1 196 aa7.08□□□□□ -1.28
APTX-230ENST00000494649 A0A087WYN8 130 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 F8VRH5 84 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 ODF1Q14990 250 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 GAGE2EQ4V326 116 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 Q8IZM0 81 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 COX7B2Q8TF08 81 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 GAGE2DQ9UEU5 116 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 LINC01561Q8N1V8 128 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 STPG4Q8N801 248 aa7.07□□□□□ -1.28
APTX-230ENST00000494649 LOC107984640A0A0U1RRK4 108 aa7.06□□□□□ -1.28
APTX-230ENST00000494649 Q5VSD8 79 aa7.06□□□□□ -1.28
APTX-230ENST00000494649 Q6ZRP5 223 aa7.06□□□□□ -1.28
APTX-230ENST00000494649 Q8N1X5 172 aa7.06□□□□□ -1.28
APTX-230ENST00000494649 PTTG1IPP53801 180 aa7.05□□□□□ -1.28
APTX-230ENST00000494649 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
APTX-230ENST00000494649 ABCA13Q86UQ4 5058 aa7.05□□□□□ -1.28
APTX-230ENST00000494649 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
APTX-230ENST00000494649 MAP1LC3CQ9BXW4 147 aa7.05□□□□□ -1.28
APTX-230ENST00000494649 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
APTX-230ENST00000494649 CIRBPQ14011 172 aaKnown RBP7.04□□□□□ -1.28
APTX-230ENST00000494649 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
APTX-230ENST00000494649 IGLV5-39A0A0G2JS06 123 aa7.03□□□□□ -1.28
APTX-230ENST00000494649 TRBV30A0A0K0K1B3 111 aa7.03□□□□□ -1.28
APTX-230ENST00000494649 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
APTX-230ENST00000494649 KRTDAPP60985 99 aa7.03□□□□□ -1.28
APTX-230ENST00000494649 COA6Q5JTJ3 125 aaKnown RBP7.03□□□□□ -1.28
APTX-230ENST00000494649 A0A1W2PNN7 141 aa7.02□□□□□ -1.29
APTX-230ENST00000494649 SYS1-DBNDD2H3BUS1 97 aa7.02□□□□□ -1.29
APTX-230ENST00000494649 XAGE1AQ9HD64 81 aa7.02□□□□□ -1.29
APTX-230ENST00000494649 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
APTX-230ENST00000494649 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
APTX-230ENST00000494649 NDUFC2-KCTD14E9PQ53 114 aa7.01□□□□□ -1.29
APTX-230ENST00000494649 F8WDY8 70 aa7.01□□□□□ -1.29
APTX-230ENST00000494649 DPM2O94777 84 aa7.01□□□□□ -1.29
APTX-230ENST00000494649 IGKCP01834 107 aa7.01□□□□□ -1.29
APTX-230ENST00000494649 C3orf79P0CE67 100 aa7.01□□□□□ -1.29
APTX-230ENST00000494649 PFN2P35080 140 aa7.01□□□□□ -1.29
APTX-230ENST00000494649 FAM19A5Q7Z5A7 132 aaPredicted RBP7.01□□□□□ -1.29
APTX-230ENST00000494649 A0A0U1RRA0 63 aa7□□□□□ -1.29
APTX-230ENST00000494649 CXCL5P42830 114 aa7□□□□□ -1.29
APTX-230ENST00000494649 PLAC8Q9NZF1 115 aa7□□□□□ -1.29
APTX-230ENST00000494649 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
APTX-230ENST00000494649 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
APTX-230ENST00000494649 S100A6P06703 90 aa7□□□□□ -1.29
APTX-230ENST00000494649 PLNP26678 52 aa7□□□□□ -1.29
APTX-230ENST00000494649 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
APTX-230ENST00000494649 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
APTX-230ENST00000494649 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
APTX-230ENST00000494649 PKIGQ9Y2B9 76 aa6.99□□□□□ -1.29
APTX-230ENST00000494649 TSPEAR-AS2P59090 65 aa6.99□□□□□ -1.29
APTX-230ENST00000494649 S100A2P29034 98 aa6.98□□□□□ -1.29
APTX-230ENST00000494649 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
APTX-230ENST00000494649 PHF5AQ7RTV0 110 aaKnown RBP6.98□□□□□ -1.29
APTX-230ENST00000494649 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
APTX-230ENST00000494649 HIST3H2BBQ8N257 126 aa6.98□□□□□ -1.29
APTX-230ENST00000494649 RPL37AP61513 92 aaKnown RBP6.97□□□□□ -1.29
APTX-230ENST00000494649 LINC01545Q5VT33 79 aa6.97□□□□□ -1.29
APTX-230ENST00000494649 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
APTX-230ENST00000494649 HIST1H2BLQ99880 126 aa6.97□□□□□ -1.29
APTX-230ENST00000494649 ERG28Q9UKR5 140 aa6.97□□□□□ -1.29
APTX-230ENST00000494649 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.29
APTX-230ENST00000494649 PET117Q6UWS5 81 aa6.96□□□□□ -1.29
APTX-230ENST00000494649 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.3
APTX-230ENST00000494649 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.3
APTX-230ENST00000494649 HERVK_113P61574 105 aa6.95□□□□□ -1.3
APTX-230ENST00000494649 C7orf33Q8WU49 177 aa6.95□□□□□ -1.3
APTX-230ENST00000494649 J3QQQ9 107 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 M0QXV9 152 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 LEPROTO15243 131 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 LINC00158P58513 81 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 KRTAP10-4P60372 401 aaPredicted RBP6.94□□□□□ -1.3
APTX-230ENST00000494649 MEIG1Q5JSS6 88 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 SMIM13P0DJ93 91 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
APTX-230ENST00000494649 KRTAP11-1Q8IUC1 163 aa6.94□□□□□ -1.3
APTX-230ENST00000494649 TMA7Q9Y2S6 64 aaKnown RBP6.94□□□□□ -1.3
APTX-230ENST00000494649 INAFM2P0DMQ5 153 aa6.93□□□□□ -1.3
APTX-230ENST00000494649 LGALS3P17931 250 aaKnown RBP6.93□□□□□ -1.3
APTX-230ENST00000494649 DAND5Q8N907 189 aa6.93□□□□□ -1.3
APTX-230ENST00000494649 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
APTX-230ENST00000494649 FLG2Q5D862 2391 aaPredicted RBP6.93□□□□□ -1.3
APTX-230ENST00000494649 SND1-IT1Q9HBX3 110 aa6.92□□□□□ -1.3
APTX-230ENST00000494649 IGKV2D-26A0A0A0MRZ7 120 aa6.92□□□□□ -1.3
APTX-230ENST00000494649 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
APTX-230ENST00000494649 PLEKHB2Q96CS7 222 aa6.92□□□□□ -1.3
APTX-230ENST00000494649 MYCBP2O75592 4640 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms