RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 H7C2G1 150 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 BUB3O43684 328 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
HDAC6-234ENST00000493923 S100A7L2Q5SY68 101 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 Q5XG85 94 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 XCL2Q9UBD3 114 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
HDAC6-234ENST00000493923 TRAV12-2A0A075B6T6 113 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 VCYO14598 125 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 RS1O15537 224 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 BCE1O60756 84 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 GAS8-AS1O95177 125 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 IGKV3-20P01619 116 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 PRB4P10163 310 aaPredicted RBP5.79□□□□□ -1.48
HDAC6-234ENST00000493923 RHOHQ15669 191 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 ATP5EP2Q5VTU8 51 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 HRCT1Q6UXD1 115 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 C20orf173Q96LM9 149 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 TIMM21Q9BVV7 248 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 V9GYY9 64 aa5.79□□□□□ -1.48
HDAC6-234ENST00000493923 RYR1P21817 5038 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 IGIPA6NJ69 53 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 F6UB75 175 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 SOCS3O14543 225 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 PFN2P35080 140 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 MIAQ16674 131 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 VSIG2Q96IQ7 327 aa5.78□□□□□ -1.48
HDAC6-234ENST00000493923 IGKV3D-20A0A0C4DH25 116 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 COX7A2LO14548 114 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 PRM2P04554 102 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 MIFP14174 115 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-234ENST00000493923 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-234ENST00000493923 TSPEAR-AS2P59090 65 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 SEC61GP60059 68 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 RNF182Q8N6D2 247 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 Q8TAT8 98 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 C9orf85Q96MD7 179 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 UPK3BQ9BT76 320 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 C1orf43Q9BWL3 253 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
HDAC6-234ENST00000493923 NACAE9PAV3 2078 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 FAM236DA0A1B0GTK5 79 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 EPM2AB3EWF7 344 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 FAM236CP0DP71 79 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 IGFL4Q6B9Z1 124 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 C9orf47Q6ZRZ4 202 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
HDAC6-234ENST00000493923 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 TRAV8-3A0A0A6YYJ7 113 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 TRAV10A0A0B4J240 114 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 TRBV6-5A0A0K0K1A5 114 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
HDAC6-234ENST00000493923 I3L3M4 83 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 EIF4EBP3O60516 100 aaPredicted RBP5.75□□□□□ -1.49
HDAC6-234ENST00000493923 DNAL4O96015 105 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 C1orf158Q8N1D5 194 aa5.75□□□□□ -1.49
HDAC6-234ENST00000493923 IGHV3OR16-12A0A075B7B8 117 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 DEFB131BA0A096LNP1 70 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 NXPH4O95158 308 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 S100A4P26447 101 aaKnown RBP5.74□□□□□ -1.49
HDAC6-234ENST00000493923 SNRPD3P62318 126 aaKnown RBP5.74□□□□□ -1.49
HDAC6-234ENST00000493923 CIRBPQ14011 172 aaKnown RBP5.74□□□□□ -1.49
HDAC6-234ENST00000493923 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 C14orf178Q8N769 122 aaPredicted RBP5.74□□□□□ -1.49
HDAC6-234ENST00000493923 SMCR5Q8TEV8 140 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 FAM19A4Q96LR4 140 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 PHLDA3Q9Y5J5 127 aa5.74□□□□□ -1.49
HDAC6-234ENST00000493923 MUC4Q99102 2169 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 A8MTW9 85 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 M0R2N4 97 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 TSHBP01222 138 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 MGPP08493 103 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 POLR2KP53803 58 aaKnown RBP5.73□□□□□ -1.49
HDAC6-234ENST00000493923 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 LAMTOR3Q9UHA4 124 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
HDAC6-234ENST00000493923 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 USP17L23D6RBM5 183 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 RTL8CO15255 209 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 DAZ2Q13117 558 aaKnown RBP5.72□□□□□ -1.49
HDAC6-234ENST00000493923 C1orf195Q5TG92 126 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 DAZ4Q86SG3 579 aaKnown RBP5.72□□□□□ -1.49
HDAC6-234ENST00000493923 CLEC2BQ92478 149 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 LINC00477Q96M19 166 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 TMEM243Q9BU79 118 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 DAZ3Q9NR90 486 aaKnown RBP5.72□□□□□ -1.49
HDAC6-234ENST00000493923 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
HDAC6-234ENST00000493923 HSPG2P98160 4391 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 IGHV1-58A0A0C4DH39 117 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 TRBV10-3A0A0K0K1G6 114 aa5.71□□□□□ -1.5
HDAC6-234ENST00000493923 NDUFC1O43677 76 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms